Bufo bufo (common toad): 121005504
Help
Entry
121005504 CDS
T07950
Symbol
BTAF1
Name
(RefSeq) LOW QUALITY PROTEIN: TATA-binding protein-associated factor 172
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
bbuf
Bufo bufo (common toad)
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbuf03021
]
121005504 (BTAF1)
Transcription machinery [BR:
bbuf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
121005504 (BTAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
Helicase_C
HEAT
HEAT_EF3_N
TOR1L1_N
Vac14_Fab1_bd
HEAT_2
HEAT_EZ
TPR_Trm732_C
ARM_ECM29
Motif
Other DBs
NCBI-GeneID:
121005504
NCBI-ProteinID:
XP_040294204
LinkDB
All DBs
Position
6:61356886..61453548
Genome browser
AA seq
1864 aa
AA seq
DB search
MAVSRLDRLFILLDTGTTPVTRKAAAQQLGEVVKLHPHELNNLLNKVLIYLRSANWDTRI
AAGQAIEAIVKNIPDWSPTARIKKEAGSECSNDESSSSDRLSFERFDISKLLKHGASLLG
SAGVEFEVQEDKSGDVDPKERIARQRKLLQRKLGLDMGAAIGMNTEELFNDEDLDYLPTN
TLVNKPTLQAAEFIDTEFLPGMSNRQKNKAKRMAKLIAKQRSRDVTDTNEKSSDSTDGEP
DEKRRKVTNVVIPQPATECKVLIDNIPDNSSLFDETNEWPLESFCDELCNELFNPSWEVR
HGAGIGLREILKAHVRNGGKMAHSTCDEMEQQHQEWLEDLAIRLLCVFALDRFGDFVSDE
VVAPVRETCAQTLGVVLKHMNENGVHNTVKILLRLLTQEQWEVRHGGLLGIKYALAIRQD
LIKTLLPKALPAIIEGLQDLDDDVRAVAAASLVPVVDSLVKIQFKQVPFILGTLWDTLLE
LNDLTASTNSIMTLLSSLLTYPQVQQCNIQQSLTILVTRVWPFLHHTISSVRRAALETLY
TLLSTQDQNCSGWLTPILQDMLRHIFQICILESNQEILDLIHKVWQELVHKASVQYVVAA
ACPWMGAWLCLMMQPAHLPIDLNMLILVKPKSNEKAAGKLRQGQSQTREVAQEFIAGSDS
VTEDSATRDYLVTRTRLAAAKLLGSLCCCICDPCVNTASQEIKPAESLAQLLLFHLNSKS
XLQRISVALVICEWACFQKECKQLPLLSSHXLLAVLSEQLYYDEIAIPFTGCKMIAIQLI
STLAEANIDIGSKVNCSVFTIDQANELVTTVFSEATAPLRAIAXRLPAARXKRQQVQMTV
LETNQEWQVLQMRVHTFAACAIVNPHAAPEKLNXIIKPLMEAVKNEENAVVQNYAALCLA
NCFSSVSRGLLSKSXILKNLCSSVCVDSSITPSVICPAPALNNADHLKGSNSEKDGAXHT
VTKHRGIITLYXHQQAAFAVTSRRGPTPKATKTQVADLPHRKRSGTRPRSAMSRSPSAGS
HAVIDTLAHNHKYYLIQRRGAEYTLGYHCKHFGSXLVTGLPYLWESMVGPLRNNINVDRF
DGKLLLEKGDENAQELVYSLQVFEVTTSSMDPSLHPLLLQHLLHLFMCLQHPFTSVRHMA
SRCVGVMSRIVTMETMNGFLEKVLPWLGAIDDNTKQEGAIEALACVMEQLQVGIIPYIVL
LVVPVLGRMSDQTDSVRFMATQCFATLIRLMPLEAGISDPPNMSEELIKLKARERSFLEQ
LLDGKKLENYTIPVPIKAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILA
GDHCLRSREYSRSKSADCIPLPSLVVCPPTLTGHWVDEVGKFCSKEYLNPLHYTGPPTER
ARLQHQVKRHNLIVASYDVVRNDIDFFRNMKFNYCILDEGHVIKNGKTKLSKAVKQITAN
YRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSREQEAGV
LAMEALHRQVLPFLLRRMKEDVLQDLPPKIIQDYYCTLSPLQVQLYEDFAKSRAKTDVDE
TVSSSSLTEESEKPRLKATGHVFQALQYLRKLCNHPALVLTTQHPEHKKVSDQLATQNST
LRDIHHAPKLSALKQLLLDCGLGNASTPESGTEAVVGQHRVLIFCQLKSMLDIVEHDLLK
PHLPSVTYLRLDGSIPAGQRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEH
DWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMSIANTVISQENASL
QSMGTDQLLDLFTLDKGGKSEKMETSETGGKSSMKVILDNLGELWNQEQYDTEFSLDNFM
HSLK
NT seq
5595 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgtccagattagaccgcctctttatattactggacacggggacaaccccagta
acgagaaaagcggcagcgcagcagcttggagaagtggtcaaactgcatccacatgaactc
aacaacctgttaaataaggtcctgatctacctgcgcagcgctaactgggatacacgtata
gcagctggtcaagctattgaagctattgtaaaaaatattccagactggagcccaacagct
cgaataaaaaaagaggccgggtctgagtgttcaaatgatgagtcgtcttcatcggacagg
ctgagctttgaaagatttgatatatcaaagttgctaaaacatggcgcttcactccttggc
tctgctggtgttgagtttgaagtgcaagaagacaaatcgggagatgtggaccctaaggaa
aggatagctcggcagaggaaactgttacagagaaaactggggcttgacatgggagctgct
attggcatgaataccgaagagctatttaatgatgaagacttggactacttacctaccaac
acacttgtaaataaacctacccttcaagcagcagagtttatcgacacagaatttcttcct
ggaatgagtaacaggcagaaaaacaaagcaaagcgaatggcaaagctgattgctaagcag
agatcccgggatgtgaccgacacaaatgaaaagagcagtgacagtacagatggggagcca
gatgaaaaacgaaggaaagtgacaaacgtggttatccctcagccagctacagagtgcaag
gtgttgattgataacatcccggacaactcctctttgttcgatgagacaaatgagtggcct
ctggagagcttttgcgatgagctttgtaatgaactgtttaatccatcttgggaggtccgt
catggggcaggcattggtctcagggaaatactcaaagcccatgttagaaatggtggcaag
atggcgcacagtacatgtgacgagatggagcagcagcatcaagagtggcttgaagatctt
gctattcgtcttctgtgtgtatttgctttagacagatttggcgattttgtttctgatgag
gtggttgcaccagtacgggaaacatgtgctcagactctgggagtagtcctgaaacacatg
aatgaaaatggagttcacaatacagtcaaaatcctcctgcgcctattaacccaggaacag
tgggaagttagacatggaggactgctgggaataaagtatgccctagcaattcgtcaggat
ttaataaaaactttattacctaaagcactaccagcaataattgaaggtcttcaagacctt
gatgatgatgtgcgagctgtggctgcagcatctttagtgcctgttgtcgatagtctagtg
aagatacaattcaagcaggttcccttcattcttggcactttatgggatacacttttggag
ttaaatgacttaacagcgtctaccaatagtatcatgaccctcctttcttctctcttaaca
tatcctcaggttcagcagtgcaatattcaacaatcacttactatattggtgacacgggta
tggcctttcctgcatcatactatatcatctgttcgaagagcggccctggagacattatac
actttgttatccacacaggatcagaactgttcaggttggctgactcccatcttgcaggac
atgttgcggcatatatttcagatctgtattttggagagtaaccaggaaattcttgacctt
atccacaaggtttggcaggagctagtacacaaagcctctgtgcaatatgttgtggctgca
gcgtgcccctggatgggagcttggctctgtttgatgatgcagcctgctcacctgcctatt
gatttaaacatgctgatattggtgaagcccaaatcaaacgaaaaagctgctgggaaactc
cgtcaaggccagagccaaacaagagaggttgcacaggaatttattgctggctcggacagt
gtgaccgaagactctgccaccagggattacctggtgacccgcacccgtttggctgctgct
aagctgctgggatcattatgctgttgtatttgtgatccctgtgtcaataccgcgtctcag
gaaataaagcctgctgaatcattagcgcagttgctcctttttcatctgaactccaagtca
ngcttacaaaggatcagcgtggcccttgttatctgcgagtgggcctgctttcagaaggag
tgcaaacagttacccttgctgtccagccactgactgcttgctgttttgtctgaacaattg
tattatgatgaaatagcgattcctttcaccggatgcaaaatgattgcaatccagctgatt
tccacgcttgcagaagcaaacatagacattggcagcaaagtaaactgcagtgtatttaca
atagaccaagctaatgaactggtaactacagtgttcagtgaagcgacagcacctctgagg
gccattgcctaacgtttaccagcagctagatgaaaaaggcaacaagtgcagatgactgtg
ttggaaaccaaccaggaatggcaagtccttcagatgagggttcacacctttgctgcctgt
gcaatagtcaaccctcatgcagctccagaaaaacttaatnncataatcaagccgttaatg
gaagctgtgaaaaatgaagagaatgcggtggtgcagaactacgcagccttgtgtctggct
aactgcttcagcagtgtatctcgaggactcctgtccaaatcctaaattcttaaaaatctt
tgtagttcagtgtgtgtggattccagcatcacgccttctgtgatctgcccagccccagcc
ttgaacaacgcagaccatctcaaagggtcaaattctgaaaaagatggagccntgcacacg
gtcacaaagcaccgaggaataattaccctgtacnagcatcagcaagctgcttttgcagtt
actagcagacgtggcccaactccgaaagctacaaagacccaagtggcggacttgccccac
aggaagcggagcggcacacgtccacggagtgcgatgagccgctctccttctgcaggttct
catgctgtcatagacactctagctcataatcataagtattacttaatccagagaagaggt
gcagaatatactcttggctaccattgcaaacactttggaagtnatttagtcacaggcctg
ccatatctctgggaatcaatggtcggaccgctaagaaacaacattaacgttgaccgtttt
gatggcaagcttctcttggaaaaaggagacgagaacgcccaggaacttgtctacagcctt
caagtgtttgaggtcacaacctcttccatggatcccagtcttcaccccctgctgcttcaa
catcttctgcatctattcatgtgtctgcaacatcctttcacatcagtgaggcatatggcc
tctcgttgtgtaggagtgatgagccgcatcgttaccatggaaaccatgaatggcttcttg
gagaaagttttgccgtggcttggtgcgattgatgacaacacgaaacaggagggggccatt
gaggcactagcttgtgtgatggagcagctgcaagtcggtattatcccatacatcgttctt
cttgtggtgcctgttctgggaagaatgagtgaccagacagacagtgttcgcttcatggca
acgcagtgctttgcaacgctcatcaggctaatgcctttggaagctggaatctcagatcct
cccaatatgtcagaggagctaattaaactaaaagccagggagcgcagcttcttggaacag
ctgctagacggaaagaaattggaaaattatacaattcctgttccaataaaagctgaactg
aggaaatatcagcaggatggtgtaaattggctagccttcctgaacaaatacaaactgcac
gggatcctgtgtgatgatatgggcctggggaagacgttgcagtccatatgtattcttgca
ggcgaccattgccttagatctcgggagtatagcaggagtaagtctgcagactgtataccg
ctcccttcactggtcgtatgtcctccaaccttaactgggcactgggtggatgaagtagga
aagttctgctctaaagagtatctcaacccattgcattacacaggccctccgacagagcga
gccaggttacagcaccaagtgaagagacacaatctgatcgtagcttcttacgatgttgtt
aggaatgatattgacttcttcaggaacatgaagtttaattactgcatactggatgaaggt
catgtcattaagaatgggaagaccaaattgtcaaaagcggtgaagcagataacagcaaat
tatcgtattatcctgtctgggacaccaattcagaacaacgttttggagctctggtcattg
tttgacttcctcatgcctggctttttaggcaccgaacgccagtttgcggcaagatatggg
aaacctattttagcaagtagagatgctcgaagttcttctcgtgaacaggaggctggcgtt
cttgcaatggaggcattacaccggcaagttctgccatttttgctccgcaggatgaaggag
gatgtattgcaggatcttcctccaaagattattcaagattactactgtaccttgagtcct
ttgcaggttcagttatatgaagattttgcaaagtctcgtgcaaagactgatgtcgatgaa
actgtctcatcgtcatcactaacagaggagagtgaaaagccaaggctcaaagccacagga
catgtctttcaggcactgcaatatttgcggaagctatgcaaccaccctgcgttggtttta
accactcagcatccagaacacaagaaagtctcagatcagctagcaactcagaactcaact
ctacgggatattcatcatgcccccaaactgtctgcattaaagcaattgctgttggactgt
ggtcttggtaatgccagcactccggagagtggcactgaagcagttgtaggccagcacaga
gtgttgatcttctgtcagctgaagagcatgctggatattgtggagcatgaccttctaaag
cctcacttgccatctgttacatatttacgactggatggtagtatacctgcaggtcaaaga
cattccattgtgtccagatttaataatgacccatctatagatgtcttgctgctcaccacc
catgtgggtggcttgggtctcaacctgactggcgcagacactgtagtgtttgttgaacat
gactggaatccaatgagagatcttcaggccatggacagagcgcatcgtattggacagaaa
cgtgtagtaaatgtgtatcggcttattacaaggggaactctggaggagaagattatgggg
ctgcagaaattcaaaatgagtattgcaaatactgtcattagccaggaaaatgccagctta
cagagtatgggcaccgaccagctcctggacctgtttacacttgacaagggtggaaagagt
gaaaaaatggaaacatcagaaactggcgggaagagctccatgaaggtgatcctggataac
ctgggagaactgtggaatcaggagcagtacgatacggagttcagtcttgacaacttcatg
cattctctgaagtaa
DBGET
integrated database retrieval system
