Bufo bufo (common toad): 121006128
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Entry
121006128 CDS
T07950
Symbol
HERC4
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4 isoform X1
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121006128 (HERC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bbuf04121
]
121006128 (HERC4)
Enzymes [BR:
bbuf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
121006128 (HERC4)
Ubiquitin system [BR:
bbuf04121
]
Ubiquitin ligases (E3)
HECT type E3
121006128 (HERC4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Motif
Other DBs
NCBI-GeneID:
121006128
NCBI-ProteinID:
XP_040295003
LinkDB
All DBs
Position
6:74351552..74446361
Genome browser
AA seq
1057 aa
AA seq
DB search
MLCWGNASFGQLGLGGIDEEIVVEPRRCNFFLHKIVGDVGCGSRHTVFVLDDGTVYTCGC
NDLGQLGHDKSRKKPEQVGALDAQNIVAVSCGESHTLALNDKGQVFSWGLAKDGQLGFSI
TEDYIRVPRNIKSLSDVQIVQVACGQKHSISLSRGSEIFVWGDNRYGQLGLGCELKKETT
PRPLKSLSGIPFHQIAAGGAHSFALTPSGAVFGWGRNKFGQLGLNDDRDRYCPCLLKSLR
SQKIVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNNEINPRKVFELMGNIVTQIA
CGRQHTLAFVPSSGRIYSFGLGGNGQLGTGSTCNRKSPFTVKGNWISHSDFSQHPVSIDG
CYCVKKIFSGGDQSFSHYFHVQNCLPPDDFRKCNHSTPIWTINEELIQRWQNFTSGRLPL
DIVNEIDKVFSSAACINGSFLSTSNDDHYRTSAKFSGIDMNAARLLFHKLLDSAPQQAVQ
QVAASLEKSLIPKLPSSPPDIEALRLYLTLPECPLMTDPNNFLSLAIPFGTAIINLEKTP
SRVLENWWSTLENPGFMRVVQLFKDVVLHLLNSLKVGVPHAERRTFNTFLNIALKVLESV
HRVNERSGQIIPYDKFYIHEIQDLISIQHDYLAWIQQQALGMDVNQGLPEGPDGSLTICT
YPFVFDAQAKTTLLQTDAAIQMQMAVDQANRQNFSSLFLPVVESVNPCLMLIVRRENIVG
DAMEVLRKTKNIDYKKPLRVIFVGEEAVDAGGVRKEFFLLIMRELLDPKYGMFRFYEDSR
LIWFSDQTFEDSDLFHLIGVVCGLAIYNFTIVDLHFPLALYKKLLKRKPTLDDLKELMPE
VGRGMQQLLDYMEEDLEETFYLNFTVTVDKYGTTEIKELIPNGAETPVNQKNKQEFVDCY
VDYIFSHSVASLFSAFFAGFHKVCGGRVLDLFQPNELQAMVIGNTNYDWKELEKLTEYKG
EYWADHPTIKIFWEVFNELPLEQKKQFLLFLTGSDRIPILGMRSLKLIIQPTGGGECFLP
VAHTCFNLLDLPKYTCKETLREKLIQAIDHYEGFSLA
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgctggggaaacgcttcctttggacagctgggactaggtggaatcgatgaagaa
atagtcgtagagcccagaagatgcaacttcttcctccacaaaatagtcggggatgttggc
tgtggaagcaggcacactgtttttgtactagacgatgggactgtctatacgtgtgggtgt
aatgacttggggcaactaggtcatgacaaaagccgaaaaaagccagaacaagttggagcc
cttgacgctcagaatatcgttgcggtctcgtgcggggagtcgcacacacttgcactaaat
gacaaaggtcaagtgttctcctggggtctggctaaggatggccaactgggcttctccata
acagaagactatataagagtaccaagaaatataaagagtttatctgatgtgcagattgta
caggtagcctgtggtcaaaagcactcaatctctctctccagaggaagtgaaatttttgtt
tggggagacaacagatatggccagcttggattgggctgtgagctcaagaaggagacaaca
cccaggcccctgaagtccttatctgggatcccctttcatcagattgctgctgggggggca
catagttttgctctgacgccgtcaggagccgtttttggttggggacggaataaatttgga
cagcttggtctcaatgatgacagggacagatattgtccatgccttctcaaatcattgcgc
agtcagaaaattgtacacatctgctgtggtgaagatcataccgctgcactgaccaaggaa
ggaggagtttttacttttggagctggaggatatggacagcttggtcataattctacaaac
aatgagatcaaccctaggaaagtgtttgaactcatggggaacattgtcacacagatcgct
tgtggacgacagcacactctggcctttgttccttcatctggtcgtatctattcctttgga
cttggaggcaatggacaactaggaactgggtcaacatgtaacagaaaaagtccttttact
gtgaaaggaaactggatatcccacagtgatttctcccagcatcctgtcagtatagatggg
tgctactgtgtgaagaaaattttttctggtggagaccaaagcttttcacattactttcat
gtacagaactgccttccaccagatgacttccggaagtgtaaccattccacaccaatatgg
accataaatgaggagcttattcaaagatggcagaatttcacatcaggaagacttccatta
gatatagtaaatgaaattgacaaagtattctcatcggctgcttgtataaatggaagtttt
ctctctaccagcaatgatgatcattaccgaacaagtgccaagttctcagggatagatatg
aatgctgctagactcctgtttcacaagctgttggattcagcaccacagcaagctgtacag
caggtggctgccagcttggaaaaaagtctcataccaaaactaccaagttccccacctgac
attgaggctttgagactgtacctcacgctgccagagtgccctcttatgaccgacccaaac
aactttttgtctttagcaattccgtttgggactgcaattattaaccttgaaaagactccg
tcaagagttcttgaaaactggtggtctacccttgaaaatccagggttcatgcgagtagtg
cagcttttcaaagatgttgtgttgcatctattgaattctctaaaagttggagttcctcat
gcggaaagaagaactttcaacacttttcttaatattgccctgaaggttttggagagtgtg
catagggtaaatgaaagatcaggacagattataccttatgataaattctacatccatgaa
atacaagacttaataagtatccagcatgactatctggcttggatccagcaacaggcactt
ggtatggacgtaaaccagggattacctgagggaccagatggctctctcacaatttgtaca
tatccatttgttttcgatgcacaagctaagacaacgcttctacagacggatgccgccata
cagatgcagatggcggtcgatcaagccaacagacagaatttttcatcactgtttcttcca
gtggttgaatcggtgaacccgtgcctaatgttaatcgtccgcagagaaaacattgtgggg
gatgctatggaagttttaaggaaaaccaaaaacattgactacaagaaacctttaagggtt
atttttgtgggtgaagaagctgttgatgcaggtggagtacgtaaggagtttttcttgctc
ataatgagagaacttctagatccaaagtatggaatgtttcgtttctatgaagattccaga
ctcatttggttttcagaccagacctttgaggacagcgatttgttccatctcatcggtgtg
gtttgtggcttagcaatttacaactttactattgttgatcttcacttccctttggcttta
tataagaaacttctgaagaggaagccaaccttagatgatctaaaggagctgatgccagaa
gttggcaggggcatgcagcagctgctggactacatggaggaagaccttgaagagaccttc
tatctcaattttacagttacggtggataaatatggaactacagaaatcaaggaactgatt
cctaatggtgcagagacaccggtgaaccagaaaaacaagcaagaatttgtagattgctat
gtggactacatcttcagtcattcagtggcttccttattcagtgcgttctttgcaggcttt
cacaaggtgtgtggaggccgagtgctagacctcttccaaccaaatgagctgcaggccatg
gttatcggcaacacaaactacgactggaaggagctggagaagcttactgaatataaagga
gagtactgggcagatcatcccaccatcaaaatattttgggaggttttcaatgagttacca
cttgaacagaaaaagcaatttttattgtttttgacaggcagtgaccggataccaattctt
ggaatgagaagcttaaaacttataatacagccgacgggcggaggagaatgtttcctacct
gttgcccacacgtgtttcaatctcttggatctcccaaaatacacctgcaaagagacactg
cgagaaaaactgatccaggctattgatcattacgaaggcttcagccttgcataa
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