Bufo bufo (common toad): 121007402
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Entry
121007402 CDS
T07950
Symbol
RNPS1
Name
(RefSeq) RNA-binding protein with serine-rich domain 1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf03013
Nucleocytoplasmic transport
bbuf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121007402 (RNPS1)
03015 mRNA surveillance pathway
121007402 (RNPS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbuf03019
]
121007402 (RNPS1)
Messenger RNA biogenesis [BR:
bbuf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
121007402 (RNPS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_5
RRM_occluded
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
121007402
NCBI-ProteinID:
XP_040295236
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All DBs
Position
7:29710584..29721759
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AA seq
309 aa
AA seq
DB search
MAAPRHNERDGLSDLRREKQRKSGKMAPSPSKRKERSEDRAKERTKEKAPNKEAGEKDRG
RDKTRKRRSASTGSSSSSRSRSSSSSSSSSGSSSGSSSGSSSSSASSRSGSSSSSRSSSS
SSSSGSPSPSRRRHDNRRRSRSKSKQPKRDEKERKRRSPSLKPTKVHIGRLTRNVTKDHI
LEIFSTYGKIKMIDMPVDRLHPHLNKGYAYVEFEASDEADKALKHMDGGQIDGQEITASA
VLTPRPLRVVPRRFSPPRRMLPPPPMWRRSPPRMRRRSRSPRRRSPVRRRSRSPARRRHR
SRSSSNSSR
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccgcgtcataacgagcgcgacggcttgtctgatctcaggagggagaagcag
agaaagtccgggaaaatggctccctctcctagcaagcgtaaagagcgctctgaagaccgg
gccaaagagcgaaccaaggagaaggcccccaacaaagaggcaggagagaaagatcgcggg
cgggataagacccggaagaggcgcagcgcctctactggcagcagtagcagcagtcgctcg
cggtcgagctcatcatccagttcttcctcgggctccagctctggatcaagctcaggatca
agttcttcatctgcttcaagccggtcaggcagctccagctcatcccgaagctccagctcc
agcagttcctccgggtccccaagtccttcccgccgtcgccatgacaatcgaaggcgctcc
cgctcaaaatcaaaacagccaaaacgtgatgaaaaagagaggaagaggaggagtccaagt
ctgaagcccaccaaagtgcacattgggaggttgacgaggaacgtgactaaggaccacata
ctggagatcttttctacctatgggaagattaagatgattgacatgcccgtagaccgcctg
cacccacatctcaacaagggctacgcctacgtggagtttgaggcttccgatgaagctgac
aaagccctgaaacacatggatggaggacagattgatggccaggagatcaccgcttcagca
gtgcttactcctcgacccttgagggtggtgcctcgaaggttcagccctccccgccggatg
ttaccgcctccccctatgtggcgtcgttctcccccacgcatgaggaggaggtcccgttct
ccacgtcgacgctcccctgtccgccgccgctctcggtcccctgcacgccgtcgccaccgc
agccgttccagctccaattcatcacggtga
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