Bufo bufo (common toad): 121007483
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Entry
121007483 CDS
T07950
Symbol
SMARCAL1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1
KO
K14440
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]
Organism
bbuf
Bufo bufo (common toad)
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bbuf03036
]
121007483 (SMARCAL1)
Chromosome and associated proteins [BR:
bbuf03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
121007483 (SMARCAL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARP
SNF2-rel_dom
Helicase_C
ResIII
ERCC3_RAD25_C
DEAD
Motif
Other DBs
NCBI-GeneID:
121007483
NCBI-ProteinID:
XP_040295362
LinkDB
All DBs
Position
7:complement(225172840..225209246)
Genome browser
AA seq
965 aa
AA seq
DB search
MTMSTCLTEEQKRRIEENRQKALARRAERLAIQKNGINQNASAIYNTKPQPTGGNHLQNV
QPTAKEAGKVDSFKYGTTGNASNNVKNPPTMQTAAAAQEYTAGYKPQTTAPARVDYTAAG
PAQEYTAGYKLQTTAPARVDYTAAGPAQEYTAGNKPQTTAPARVVSSITAGWTFQPEGTK
NFPQGSSKPHGASPQMYDIHSGSGKAGAETVKSPSTASKFYGLGTTTSGGKAAGPVPRTN
GREMMGSASSSEAAPVKKAAAAIKGRCVKHGDERFRVEVGYNAELICLFKGIPSKNYDPA
TKMWNFGIEDYPSLMSEVQRLQNVALKPLEGMEDIDIPALISTASGGATVGALLAMCNSW
QRPSATLKGKCLLVSRSRFEVDIGYHLEVIGLFKQMSSRNYDTKTRKWSFLLEDYQQLME
ASLRIQQVEVEPLPRPVVQAFASQFEKTSVSRPEVPDVDLSAVDSKLVSSLMLFQREGVS
FAISREGRLLLADDMGLGKTIQAICIAAYYRKEWPLLVVAPSSVRFTWAEAFNRWLPSVR
SDSINVIVTGRDSHSAGLVNIISFDLLGKMDKSITSSFKVIIIDESHFLKNVKTARCKSA
MPLLKNAKRVILLSGTPAMSRPAELYTQIAAVRPNSFPRFHDFGVRYCDAKQMPWGWDYS
GSSNMNELKLLLEESLMIRRLKSEVLSQLPAKQRKMVVIAPEGINAKTKAALAAAAKEMA
QGFKSKVQEKEALLLFYNRTAEAKIRSVIEYILDLLESGREKFLVFAHHKLVLDNVCEEL
GKKNVGFIRIDGTTPSADRQALCQKFQFSEKSCVAVLSITAANMGLTLSSADLVVFAELF
WNPGVLIQAEDRVHRIGQTSSVNIHYLVAKGTADDYLWPMIQEKIKILGQAGLSEANFSE
TTEAADFFYKDPKQKTIYDLFQRSFSGDGAADDADEALLLEACEEFDQEIQEGNLCKKRK
IEDYF
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgacaatgtccacctgtctgaccgaggagcagaagaggaggatcgaggagaaccggcag
aaggctttggcgcggagagcagagagactcgccatccagaaaaacggaattaatcagaac
gcatccgccatctataataccaagcctcagccaaccgggggcaaccacctgcagaatgtg
cagccgaccgccaaagaagccgggaaggtcgatagttttaaatacggtacaactggaaac
gcttctaataatgtcaagaatccgccaactatgcaaaccgctgctgccgcccaggagtac
acggcgggttataaaccgcagaccaccgctccagcaagggtggattataccgcagccggc
cccgcccaggagtacacggcgggttataaactgcagaccaccgctccagcaagggtggat
tataccgcagccggccccgcccaggagtacacggcgggtaataaaccgcagaccaccgct
ccagcaagggtggtctctagtataactgctggctggacatttcagcctgaggggaccaaa
aactttccccaaggctcctccaaacctcacggtgcttccccccagatgtacgatatccat
tcaggatccgggaaagctggggcggagacggtgaagagcccaagtaccgcttctaagttt
tatggattggggacaacaacctccggtgggaaggccgcggggccagtgccacggacaaac
gggagggagatgatgggcagcgctagtagctcagaggccgctcctgtcaaaaaagctgca
gccgccattaaagggagatgcgtcaaacatggcgacgagaggttccgggtcgaggtcgga
tataacgcagaactcatctgcctcttcaaagggatccccagcaaaaattacgatcctgca
actaaaatgtggaatttcgggatagaagattacccgagtctgatgagcgaggtccagagg
ctgcagaacgtcgccctaaaacccctggaaggaatggaggacatcgatatcccggcactt
atctccacagccagtgggggcgccaccgtcggtgctcttttggccatgtgcaacagctgg
cagagaccgagcgccaccttaaagggcaagtgcctgctggtgtctcgctcccgctttgag
gtggacatcgggtatcacctagaggtcatcggcctgttcaagcagatgagctcccgcaac
tacgacacgaaaaccagaaaatggagctttctactggaggactaccagcaactgatggag
gcctcactaaggatccagcaggtggaggtggagccgctccccagacccgtggtacaagca
tttgcctctcagtttgagaagacctctgtaagtcgcccggaggtcccagacgtagacctg
tctgcagtggattccaagctagtcagcagcctgatgctcttccagagggagggggtgagc
tttgccatctctcgggagggccgcctgctccttgctgacgacatgggcctggggaagacc
atccaggccatctgcatcgctgcttattacagaaaggagtggccgctgctggtggtggcg
ccttcgtcggtccggtttacctgggctgaggctttcaacagatggctgccgtccgtcagg
tcagatagcatcaatgtcatagtcacaggtcgtgacagccattccgccggcctcgtcaac
atcatcagcttcgacctcctcgggaagatggacaagagcatcacctccagcttcaaagtc
attattatagatgaatctcattttctgaagaacgtgaagacggccagatgtaagtccgcc
atgcccttgttaaagaatgcgaagagagtcatcctgctgtcgggcactccggccatgtcc
aggcccgccgagctgtacacccagatcgccgctgttagacccaactctttcccccgtttc
cacgactttggagtccgttactgtgacgctaaacagatgccgtggggctgggattactcc
gggtcctcgaatatgaatgagctgaagctcctgctggaagaatccctaatgattagacga
ctcaagtctgaggtcctctcccagctgcccgccaaacagcgcaaaatggtggtcatcgcg
cccgagggcatcaatgcgaagacgaaagccgcgttagctgcagcggctaaagagatggcg
caaggcttcaaaagcaaagtccaagagaaagaagctcttctcctgttctacaacagaact
gccgaagccaagatccgatctgtaatagaatacatcctggatctgctggagagcggccga
gagaagttcctggtgtttgctcatcacaagttggtcctggacaatgtctgtgaagagctg
gggaaaaagaacgttggatttatccgtatcgatggaaccaccccctcagccgatcgccaa
gctctctgccaaaaattccagttttcagagaagagctgtgtcgctgtattgtccatcacg
gctgccaacatggggctgaccctgtcctcagcagacttggtggtgtttgcagagctgttc
tggaacccgggggttttgattcaagcagaagatcgggtccacagaataggacagaccagc
tccgtgaatattcactacctggtggcaaaaggaacagcggacgactacttgtggccgatg
attcaggaaaagatcaagatcttgggccaggcgggtctgtcggaggcgaacttctcagaa
acaacagaagccgctgactttttctataaggaccccaaacagaagaccatatatgaccta
ttccagaggtcgttttcaggggacggggcggcggatgacgcagatgaagctctgctgctc
gaggcctgtgaagagtttgaccaagaaattcaagaaggaaatctgtgtaagaaaaggaaa
atagaggactacttctga
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