Bufo bufo (common toad): 121007495
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Entry
121007495 CDS
T07950
Symbol
CPSF4
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121007495 (CPSF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbuf03021
]
121007495 (CPSF4)
03019 Messenger RNA biogenesis [BR:
bbuf03019
]
121007495 (CPSF4)
Transcription machinery [BR:
bbuf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
121007495 (CPSF4)
Messenger RNA biogenesis [BR:
bbuf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
121007495 (CPSF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_3
zf-CCCH_2
Torus
zf-CCCH_12
zf-CCHC
zf-CCCH_4
zf-CCCH_RBM22
zf-CCCH_DUS3L
zf-C3H1
Nab2-like_zf-CCCH_
Motif
Other DBs
NCBI-GeneID:
121007495
NCBI-ProteinID:
XP_040295373
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All DBs
Position
7:complement(87215293..87229998)
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AA seq
269 aa
AA seq
DB search
MQELIACVDHIRFDLELAVEQQLGAQPLPFPGMDKSGAAVCEFFLKSACSKGGMCPFRHI
SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
IKDCPWYDRGFCKHGPLCRHRHTRRVICVNYLVGFCPEGPNCKFMHPRFELPMGATEQPP
LPQQTQNQQKQNNSQSSQRSSSLIQLTSQSSPLGQQRSPQTIGVMQSQNNNIGNRGPRPL
EQVTCYKCGEKGHYANRCTKGHLAFLSGQ
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagctcatcgcttgtgtggatcacattcgcttcgacctggagctggctgtggag
cagcagctgggggcacaacctctgcccttcccgggcatggacaaatccggggcagctgtt
tgcgaattctttttgaagtccgcctgcagcaaagggggcatgtgcccttttcgtcatatt
agtggggagaagactgtggtctgtaagcactggttacgagggctttgtaagaaaggggac
cagtgtgagttcctgcatgaatatgacatgaccaaaatgccagagtgctacttctactca
aagtttggcgagtgcagtaacaaggagtgcccatttttacatattgacccagaatccaag
ataaaggactgtccttggtatgatagaggcttctgtaaacatggtcccctatgcaggcat
cggcatacacgtagagtcatttgtgtcaactatctagttggattttgtcctgaaggcccg
aactgtaaattcatgcacccccgatttgaattgcctatgggtgctactgaacaacctcct
ctacctcaacagacccagaaccagcaaaagcaaaataacagccagtcgtcacagagatcg
tcctccctcatccagttaacaagccagagttcacctttaggccagcaacggtctccacag
actatcggtgtcatgcaatcacaaaacaataatataggaaatcgggggccccgaccactc
gaacaggtcacctgttataagtgcggtgagaagggacattatgccaacagatgtacaaag
ggtcatttggcattcctgagcggacagtga
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integrated database retrieval system
