Bufo bufo (common toad): 121007510
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Entry
121007510 CDS
T07950
Symbol
SHMT1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf00260
Glycine, serine and threonine metabolism
bbuf00630
Glyoxylate and dicarboxylate metabolism
bbuf00670
One carbon pool by folate
bbuf01100
Metabolic pathways
bbuf01200
Carbon metabolism
bbuf01230
Biosynthesis of amino acids
bbuf01240
Biosynthesis of cofactors
bbuf04981
Folate transport and metabolism
Module
bbuf_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
121007510 (SHMT1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
121007510 (SHMT1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
121007510 (SHMT1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
121007510 (SHMT1)
Enzymes [BR:
bbuf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
121007510 (SHMT1)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
SHCBP_N
Motif
Other DBs
NCBI-GeneID:
121007510
NCBI-ProteinID:
XP_040295404
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Position
7:complement(21455858..21465844)
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AA seq
484 aa
AA seq
DB search
MADSPVMNGGHHDPWTRHNQMVLEPLETNDPEVYEIIRKEKHRQRYGLELIASENFASCA
VLQALGSCLNNKYSEGYPGQRYYGGTEHVDELELLCQKRALETYMLDPQKWGVNVQPYSG
SPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMPYKVNPDTGY
IDYDRLEENARLFHPKLIIAGVSCYSRNLDYARMRKIADENNAVLMADMAHISGLVAAGV
VPSPFEHCDIVTTTTHKTLRGCRAGMIFYRKGVCSVDPKTGKDILYKYESLINQAVFPGL
QGGPHNHAIAGIAVALKQAMSPEFKLYQTQVVANCRALASELEGLGYHIVTGGSDNHLIL
VDLRNKKTDGGRAEKVLEACAIACNKNTCPGDKSALRPSGLRLGSPALTSRAFREDDFKK
VAHFIHQGILLTLEIQNDMNPKATLKEFKDKLASDGKHREKISSLKEEVEQFSSVFPIPG
LPDL
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggccgactctcctgtgatgaacggcgggcaccatgatccatggacacgtcataaccag
atggtactagagcctctggaaacgaatgatccggaggtgtacgaaattatccgcaaggag
aagcaccgccagcgctacggactggagctcatcgcctctgagaactttgccagctgtgcc
gtgctgcaggctctcggttcttgtctgaacaacaagtattccgagggttacccaggacaa
aggtactatggtggcacagagcacgtagatgagttggaactgctgtgtcagaagagagct
ttggagacgtacatgttggacccccagaaatggggggtgaatgtgcagccgtattcaggt
tcccctgcaaattttgctgtttacactgctttggtggagccacatgggagaattatggga
ctggacctgcctgatggggggcaccttacccatggcttcatgaccgacaagaagaaaatc
tctgccacatccatcttttttgaatccatgccctacaaggtgaatccagacactggttat
atagactatgacagactggaagaaaacgcccgcttgtttcatcccaaactgatcattgcc
ggtgtcagctgctactcccggaatctggactatgcccggatgaggaagattgctgacgaa
aacaatgctgttctcatggcagacatggcgcacattagtggcctggtggcggcgggtgtc
gtgccttctccttttgaacactgtgacatcgtgaccaccacaacccacaagaccctgcgc
ggctgccgtgctggcatgatcttttacaggaagggagtctgcagcgtggatccaaagacg
gggaaggatatcctgtacaaatacgagagtctgattaatcaagcagtatttcctggctta
caaggtggaccccataaccacgctattgcaggtattgctgtggccctgaaacaagcaatg
agcccagagttcaagttgtaccagacacaggtcgtcgccaattgccgggcattggcaagc
gagctggaaggacttggttatcacatcgtcactgggggttctgataatcatctcatcctg
gtcgacctgaggaacaagaagacagatggaggaagagcagagaaggtcctcgaagcctgc
gccattgcttgcaacaagaacacttgcccaggtgacaagagcgcccttcgtcccagcggc
cttcgactgggatcccctgccttgacttctcgagcattcagagaagacgactttaaaaaa
gttgcgcacttcattcaccaaggcatcttgctcactctagagatccagaacgacatgaac
cccaaggcgaccctgaaggagtttaaggacaaactggcatcagacggcaagcaccgagag
aagatttcttccctgaaggaggaggtggagcagttctcaagcgtttttcctatacccggc
ctgcctgacctgtaa
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