Bufo bufo (common toad): 121007566
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Entry
121007566 CDS
T07950
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM39-like
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
121007566
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bbuf04121
]
121007566
Enzymes [BR:
bbuf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121007566
Ubiquitin system [BR:
bbuf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
121007566
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-B_box
zf-C3HC4_2
RING_XB3-XBAT31
PRY
zf-RING_2
zf-RING_5
zf-RING_4
zf-RING_6
ANCHR-like_BBOX
U-box
DUF848
DUF948
Motif
Other DBs
NCBI-GeneID:
121007566
NCBI-ProteinID:
XP_040295528
LinkDB
All DBs
Position
7:complement(12479436..12481986)
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AA seq
514 aa
AA seq
DB search
MATADLKDELNCSICLNIYTEPVTLRCGHSFCQMCIHSVLDRQDRDGAYTCPECRAQYLK
RPALRRNMKLCNIVEHFLSTQPEAKAAGISCTYCVHSSVPAVKTCLMCEASLCDVHLSVH
SKSTDHVLTEPTSSIDNRKCATHREMLKYYCCKDATCICVSCCVFGEHRGHQVELLKEAS
EKKKEKLRKVLEKLTTKREETEKSIQSLQEHRIGVQEKAANVTTRVTDLFKDIRVQLQSL
EERILCDISRQRDKVSLSVTDLIQQMEIRREELSRKLTHIEEVCQVTDPLIVLQGRDISR
AETDEGLGKKLQAVGDLDEVLISLNLQSALSSIASDVKQSFSVQNLLLDIKTAAVDVAVS
GDLKSATWSKSPIWAKTPQRFKNYCQVLSFQSFNSGQNYWEVETSELGNWRVGAAYPSME
RKGDLSGIGQNSKSWCLRLCQKDYLVAHGAKEIPLETESPLQRLGVYLDYDAGRLSFYQL
GEPIRHLHTFTATFTEPLHAVFLVWRDGWVRIRS
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgcagatttaaaggacgagctaaactgctccatctgtctcaatatctacaca
gagccggtaaccctgaggtgtgggcacagcttctgtcagatgtgtatccactcagtgctg
gatcggcaggacagggacggagcttacacctgccccgagtgccgcgcacagtacctaaag
cgcccggcgttgcgaaggaacatgaaactttgtaacatcgtggagcatttcctgtcaacg
caaccagaggccaaggcagctgggatctcctgcacgtactgcgtccactcctctgtccca
gctgttaagacctgcctgatgtgcgaagcttctctatgtgacgtccacctgagcgtccac
agcaaatccacggatcatgtcttgacggagcccaccagttccatagacaacagaaaatgt
gccacccatcgggaaatgctgaagtattactgctgtaaggacgccacctgcatctgtgtg
tcctgttgtgtcttcggagaacatagaggacaccaagtggaacttcttaaggaggcgtct
gagaagaagaaggaaaaactgagaaaagttctggagaaactgaccacgaaacgtgaagag
acagaaaagagcatccaaagtttacaagaacataggataggagtccaggagaaggcggcc
aatgtaacgacaagggtgactgatctgtttaaggacatcagggttcagctccaatctcta
gaagaacggatattgtgtgacatctccagacagagggataaagtgtcactctcagtcact
gatctgatccaacaaatggagataaggagggaggagctttccaggaagttgacgcacatc
gaggaggtgtgccaagtgacggatccgctcattgtcctccaaggacgggacatcagcaga
gctgagactgatgaagggcttggtaagaagcttcaggctgtcggtgatctggatgaagtt
ctgatttcgttaaacctacagtcggctttatccagtatcgcgtctgacgtaaaacaaagc
ttcagcgtccagaacttactgctggacattaagacggccgcagttgatgtggccgtgtct
ggagacctgaagagtgccacgtggtccaagtccccgatctgggcaaaaactccacagaga
tttaaaaactattgtcaggttctgagttttcagagttttaactccggacagaattactgg
gaagtggagaccagtgaactggggaactggagagtgggggcagcttatcccagcatggag
cggaagggggatctgtccgggattggacagaacagcaaatcctggtgtttgcgcttgtgt
cagaaggactacctagtagctcacggagcaaaagagatcccactagagactgagtcacca
ctgcagaggctgggggtatatttggactacgatgctgggcggctgtccttctaccaactg
ggtgagcccattagacatctccacaccttcactgccactttcacggagccccttcatgcc
gtgttcctggtatggcgggacggctgggtgagaatccggagttag
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