Bufo bufo (common toad): 121007604
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Entry
121007604 CDS
T07950
Symbol
VPS16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog isoform X1
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf04140
Autophagy - animal
bbuf04148
Efferocytosis
bbuf05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121007604 (VPS16)
04148 Efferocytosis
121007604 (VPS16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121007604 (VPS16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bbuf04131
]
121007604 (VPS16)
Membrane trafficking [BR:
bbuf04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
121007604 (VPS16)
Hops complex
121007604 (VPS16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
TPR_ZFYVE26
WD40_CDC20-Fz
DUF8067
Motif
Other DBs
NCBI-GeneID:
121007604
NCBI-ProteinID:
XP_040295581
LinkDB
All DBs
Position
7:96352994..96911262
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AA seq
839 aa
AA seq
DB search
MDFCTANWYPMGDVYYRKFDLYQMEWNVKEEFKDCLIAVGPYGGPIAFMKNYLTKERASS
SRPVLEIYTASGILLSSLPKWNSGQVLQLGWTVSEDLICIQEDGTVLIYDIFCVFKRSFT
MGNEVKQNLLQETKVFHSEYRTGIAVLTGALKFTIVSNIEEVKLCRMPDVPGPKVPPSCW
AVLLQDRMALILVAIGKDLYLLDNTACSVITLPGLSPLSGAYLHMSVSFHHKYLAVFTDS
GYIWMGNASLKEKLCELTSDIRQPPKQMSWCIRPRSKQIAVVVLWDKVLLIAGRAKENIL
FPLDEETFIVSELDGVRLISHSTHEFLHEIPKATEDIFKIASMAPGALLMEAQKEYEKES
QKADDYLREIKDQNLLPVAVANCIEAAGYEHSAEMQKSLLRAASFGKCFLESYSPSDFVT
MCHDLRVLNAINEYQIGIPLTIVQYKQLTVPVLLDRLVLRRLYPLAVKICEHLKIPEFQG
VSRILAHWACYKVQQKEKSDEEVAQAINQKLGDTAGISYSEIASKACDCGRTELAIKLLE
YEPKSEDQVPLLLKMKRSNLALGKAIESGDTDLVYTVVSYMKHEFNRGDFFMTLQNHPIA
LSLYRQFCKHQEPETLKDLYNQDDNHLELGNVHVRSSYYTEKSVEGRVAELQNAVDEYNK
AKNDLATKVTEDQIKLLRIQRSLQEKIDKPYLDCSLHDTIYNLILDGMQKKAEQLYKEFR
IPDKRYWWLKISALAEKEDWEELENFSKTKKSPIGYLPYVEICMKQRNKVEAKKYIARVS
PEQRVKAFLLVGDLDQAAEAAIEHKNENEMNMVLSKCSSVTDSSATEKIERAKAQLLKK
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atggacttctgcacagctaattggtatcctatgggcgatgtttactatcgaaaatttgat
ctgtatcaaatggaatggaatgtcaaagaagaatttaaagattgccttatagctgttggc
ccatatggaggaccaatcgcctttatgaaaaattatttgacaaaagaaagagccagcagt
tcaaggcctgtgttggagatttatacagcatctggtatccttttatcctctttgccgaag
tggaatagtggtcaagttttacagctgggatggactgtttcagaagaccttatctgcatt
caggaagatggaactgtgttaatatatgacatattttgtgtattcaagcgtagcttcaca
atgggaaatgaagttaagcagaacctgcttcaggaaactaaggtatttcattctgaatac
agaactggcattgcagttttaactggagcactgaagttcacaattgtatcaaatattgaa
gaagtaaaattatgcaggatgccagatgttccaggtcctaaagtgccaccttcttgctgg
gcagttctactacaggatagaatggcattgattttagtagccataggcaaagatttgtac
ctcctggacaacacagcttgttctgttataacactgcctggattgagccctttgtctggt
gcttatctgcatatgtctgtgtcatttcatcataagtatctagcagtattcacagatagt
ggttacatatggatgggaaatgcatcccttaaggaaaaactttgtgagttaacttcagat
ataagacaaccaccaaaacaaatgtcctggtgcatcagacctcgaagtaaacaaattgcc
gttgttgtcctgtgggacaaggtgcttcttattgctggacgtgccaaagagaacatttta
tttcctttggatgaggaaacctttattgtctctgaacttgatggtgtcagacttatttct
cattctacacatgaatttcttcatgaaattccaaaagcaactgaagacatttttaaaatt
gcttcaatggccccaggtgcacttttgatggaagcacaaaaggaatatgagaaagaaagc
cagaaggctgatgactaccttcgtgagataaaggatcaaaacctgcttcctgtagctgta
gcaaattgcattgaggcagccggttatgaacattcagcagaaatgcaaaaatcattgtta
agggctgcatcttttggaaaatgttttctagaatcatattcaccttccgattttgtaaca
atgtgtcatgatctccgtgtactcaacgcaatcaatgaataccagattggcatacctttg
accattgtacaatacaaacaactcactgtcccagtccttctagacagattagttttgaga
aggctttatcctcttgctgttaaaatctgcgaacaccttaagattccagagtttcaagga
gtgagtcgtattttagctcattgggcatgttacaaggttcaacagaaagagaaatccgat
gaagaagtagcccaggccatcaatcagaaacttggtgacactgctgggatttcttattca
gagattgcttcaaaggcatgtgactgtggaagaacagaattggcgattaaactcttagaa
tatgaacctaaatctgaagatcaagtacctttgcttttgaagatgaagaggagcaacctc
gctcttggtaaagctattgaaagtggagatactgaccttgtttacacagttgtgtcatat
atgaaacacgagttcaatcgtggagatttcttcatgaccttacagaaccacccaattgcg
ctcagtttatatagacagttctgcaagcatcaggagcctgagactctaaaagacctatac
aatcaagatgacaatcacctagaacttggaaacgttcatgttcgttcaagctattacaca
gaaaagagtgttgaaggccgtgttgcagagctgcagaatgcagtagatgagtacaataaa
gcaaaaaatgacttggctactaaggttacagaggatcaaatcaaattgctaagaattcag
cgttctctacaagaaaaaattgataaaccttatctagactgttcattacatgacactatc
tataatctgattcttgatggtatgcaaaaaaaagctgaacaactttataaagaatttaga
atccctgataaaaggtactggtggctgaaaatatctgcactggcagagaaggaagattgg
gaagagttggaaaatttttcaaaaactaaaaaatccccaatagggtacctaccatatgtt
gaaatatgtatgaagcagcgaaacaaagttgaagcgaagaagtacattgcacgtgtgagc
cctgagcaaagagtaaaggcttttcttttagttggagatttagatcaagctgctgaagct
gcaattgaacataaaaatgaaaatgaaatgaacatggtcctgtcaaaatgctcctcagtc
actgattcttctgcaactgagaagattgagcgtgccaaggcacagctacttaaaaaataa
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