Bufo bufo (common toad): 121007611
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Entry
121007611 CDS
T07950
Symbol
VPS8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
121007611 (VPS8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bbuf04131
]
121007611 (VPS8)
Membrane trafficking [BR:
bbuf04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
121007611 (VPS8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
zf_RING_Vps8
VPS8_N
Clathrin
TPR_VPS8_2
zf-RING_Vps41
WD40_CDC20-Fz
zf-RING_11
TPR_Vps41
zf_RING_Vps8_fungal
zf-RING_2
zf-RING_UBOX
WDR55
Beta-prop_HPS5
BLM_N
Motif
Other DBs
NCBI-GeneID:
121007611
NCBI-ProteinID:
XP_040295591
LinkDB
All DBs
Position
7:148421070..148637565
Genome browser
AA seq
1434 aa
AA seq
DB search
MEPDSREDELASKGWDSGRLIAEAAGISGSVEDELNKSQTHMGYLDVDKDLDSKQEQIDD
KEFDIPQVDTPPTLESILNETDDEDEPFIPEDPALLNIETVDTHSCDTSSLASSDSGDRA
HKRKKRLLDAFSRHGSVLRHSLLKGISAQIVSATDKVDAGLPTAIAVSNLIAVGTSHGLA
LIFGKDTNQALRLCLGSTAVGAQYGAVSALSINNDCSRLLCGFAKGQITMWDLAGGKLLR
SITDAHPPGTAILHIKFTDDPTLAVCNDSGGSVFELTFKRVMGVRTCESRCLFSGSKGEV
CCIEPLHTKPELRDHPITQYSLLAMASLTKILVIGLKPTLKVWMTFPYGRMDPSSVPLLA
WHFVILQGALNPMLAFCRGDVVHFLLVKRDESGAIHINKQKQLHLHYDLINFTWINARTV
ALLDSAEKLHVIDRQSQEELETLEISDFQLVYNSSHFKSLATGGNVSQALALVGEKACYQ
SISNCGGQIFYLGTKSVHAMMLRNWRERVDHLLKQDCYNEALALAWSFHEGKAKAVVGLS
GDPKKRKSVVADKIVEILLQYTDKALRKCPEQGKIQIMEQHFQDTVPVIVEYCLLLQRTD
ILFSQIYDKLSENCVAKGVFLECLEPYLLRDQLPGLTTQLMKDLLLHFQDRGLMETVEAC
IIHMDITSLDIQQIVQMCWEHRLYDAMIYVYNSGTNDFISPMEKLFKSISAPVSSGKSLT
DEQVVMGNKLLVYISSSLAGRAYPLGDIPEDLVPQVKNQVFEFLIRLHSPEAPQDEDVYP
YIRTLLHFDTREFLNVLALTFEDFTNDKQAVEHQQRIVDILLKVMVENSDFTPSQVGCLF
TFLARQLAKPDNTLFVNRVLFDQVLEFLCSPDDDSRHSERQQVLLELLQAGGIVQFEENR
LIHLAERAQFYQICEFMYERKHLYDKIIECYLQDPMRKQEVFNYIHNILSIPGYSPEEKQ
STWDKAMRHMEELITLSPNKAADLVCTHFSEQLDEIIGTLQDTFLLLQFFRSLLDPRDGA
QLNPELLQNKPHITEHFIDLLCQYDPGCVTQVLQILEHYRLEETIEIVQKHSNYETLAYL
LEKKGDIQAAFQVNLTRLQNRLSALTEDSVDGADSKQTAVLKDVEDTLSETISLCERTSH
TLNQQQREELWFPLLEAMMSPQKLLSSSPSPLYSESLKSLTMEVLSSMAAYISLPSILQR
ILQDPVYGRGKLGEIQGLVLGMLDTFSYEQTLLETTTSLLNQDLHWSLRNLKASITKALV
PKQDYCCICLQQYKKRQESSDEIIVFSCGHLYHSLCLLGKDCKVEAGGQIQWSCYKCNSS
NKGRSGRQAVADLKKGRTASLVQMRTASAPPFAVEAARKSSSDSALDPQQLQAFSELCRL
YKGTSRLALLTELCRSQSPEKSSAHNPYGGVSSSSVFQNENFKLHLAPPPIIDD
NT seq
4305 nt
NT seq
+upstream
nt +downstream
nt
atggagccagactctcgagaagatgaacttgcttccaagggatgggattcagggagactt
attgctgaagctgctggaatatctggaagtgtagaagatgaacttaataaatcgcagact
catatgggctaccttgatgtggataaggacttagattccaagcaagaacagattgatgac
aaagagtttgacatcccccaagttgatacccctccaactttagagagcatcttgaacgag
acagatgatgaggatgaaccttttatacccgaggatccggctcttcttaacatagagacc
gttgacacccactcatgtgacacctcatccctggccagctctgacagtggagaccgggcc
cacaaaaggaaaaagcggctgctcgatgcattttctcgccatggatcagtactgcgccat
agtctgctgaaagggatctccgcccagatagtgtctgccacagataaagtggatgctggt
ctgcccacagcaattgctgtttccaatctcattgcagtaggtacttctcatggattggct
ttaatctttggcaaagacacaaaccaggccctgcggctctgtcttggcagcacggctgtg
ggtgcgcagtacggcgctgtctcagcactgagtatcaataacgactgctcccgacttctc
tgtggttttgccaaaggacagattactatgtgggatttagctggcggcaaactgctgcga
tctataactgatgcccatcctcctggaaccgccatcttgcatataaagtttacagatgac
ccaactcttgctgtttgcaatgatagtggaggatcagtatttgagctgacattcaagcgg
gtcatgggagtgagaacctgtgaatccagatgtctgttcagtggttccaagggagaagtc
tgctgcattgagccccttcacacaaagcctgagctacgggatcatccaatcactcagtac
tcgctgctggcaatggcgtctttaactaagatactggtgattggtctgaaacctactttg
aaagtgtggatgacatttccttatggacggatggatccctccagtgtaccacttctagcc
tggcattttgtgattctgcagggggccttaaaccccatgctggccttctgcagaggcgat
gtggttcatttccttttggtgaagagggacgaatcaggggcaattcatatcaacaagcag
aagcagctccatctgcactatgatcttatcaacttcacatggatcaatgctcgtacagtg
gcactgctggacagtgcagaaaagctccatgtgatcgacagacagagtcaagaggaactg
gagacgctggagatttctgatttccagcttgtatacaacagcagccacttcaagtctctg
gctacagggggaaatgtgagccaagcactggcgttagtaggggagaaagcttgttaccag
tcgatcagcaattgtggtgggcagatattctacttgggaacaaagtcggtgcacgctatg
atgctgaggaactggcgagagagagtcgatcatctgctgaagcaggactgttacaatgaa
gccttagctttagcgtggtcattccatgaagggaaagcgaaggcggttgttggtctgtca
ggagacccaaagaaaaggaagagtgtggtggccgataagatagttgaaatattgcttcag
tacactgacaaggccctgaggaaatgtcctgagcagggtaaaatccagattatggagcaa
catttccaggacactgtgccagtcatagtagagtactgtctgcttctgcaacgcacagat
atcctcttcagtcaaatatatgacaaactgagtgagaactgcgtggccaaaggcgtcttc
ttggagtgtttagagccatatcttctgcgtgaccagcttcctggtcttaccactcaattg
atgaaggatcttcttctccactttcaggatagaggcctgatggagactgtagaggcctgt
ataatacatatggacatcacaagcctcgacatacagcagattgttcagatgtgttgggag
cacagactatatgatgcaatgatctatgtgtacaacagtgggacaaatgattttatcagc
cctatggagaaactattcaagtccatttctgcgcctgtcagctctgggaagtcattgaca
gatgaacaagttgttatgggaaacaagcttcttgtgtatatcagttctagcttggctggc
agagcataccctttgggagacatccctgaagacttagtcccacaggtgaagaaccaggtt
ttcgagtttctaatccgtttgcactcgccagaggccccacaagatgaggatgtatatccc
tatattcgcacattgttgcattttgacactcgagaattcctgaatgttttggcattgaca
tttgaagattttactaatgataaacaagctgtggaacaccaacagaggattgtggacatc
ttactgaaggttatggttgagaattccgatttcacaccttcccaggtcggctgcctgttc
acattcttggctcgccaacttgccaaaccagacaatacactttttgttaacagagtactg
tttgatcaggtactggagttcttgtgcagtcctgatgatgattccagacattcagaaaga
caacaggttctacttgagctgctgcaggctggaggaattgtacagtttgaagagaataga
ctgattcacctggcagagcgagcccagttttatcagatttgtgagttcatgtatgaaaga
aagcacctttacgataaaatcatagaatgttatttgcaagatcccatgagaaagcaagaa
gtttttaactatattcataatatattgtcaattcctggatacagtcctgaggagaagcag
tcaacgtgggacaaagcaatgagacatatggaggagctgataacgctgagtccaaataaa
gcagcagatctggtctgcacccacttcagtgaacagctggatgagatcataggaacgctt
caggatacgtttttgcttctccagttttttagaagccttctagatccaagggatggagct
cagctaaatcctgaactgttacagaacaagccgcatatcacagaacacttcatagacctt
ctgtgtcagtatgaccctggttgtgtgactcaagtgctacaaatactggaacactaccga
ttggaggagactattgagattgtccagaagcacagtaactatgagacattagcctatctt
ttggagaagaaaggagatatccaggcggctttccaagtgaatcttacgaggctacaaaac
agattgtcagcgttgactgaggactccgtggatggggcagatagcaaacaaacggcggtc
ttgaaagatgttgaggatactctttcagaaacgatctctttgtgtgaaagaacatcacat
acactcaaccagcagcagagagaggagctgtggttcccgctgcttgaggcaatgatgtca
ccgcagaagcttttaagttcctctccatctccgctgtattcagagtcattaaaaagtctg
acaatggaagtccttagtagcatggctgcatatatctcacttccgtccatactccagagg
atactgcaggatcctgtgtacgggagaggaaaattaggcgaaatccaaggcttggtatta
ggaatgttggatacatttagctatgagcagacactattggaaaccaccacaagcttattg
aaccaagaccttcactggtcattgcgcaacctcaaagcttctattaccaaggcactagta
ccaaagcaggattactgttgtatctgtctgcaacagtacaagaagagacaagaatcatca
gatgaaatcattgttttcagctgtggacatttgtaccactctctatgtcttttgggaaag
gactgcaaagtggaagcaggaggtcagattcaatggagttgttacaagtgtaattcaagc
aacaaagggcggtctggccggcaggcagtggcagatctgaagaagggaaggacagcgtct
ttggtacagatgagaactgcttctgcccctccattcgcagtggaagctgcaagaaagtca
agctctgattccgctctcgacccacagcagctgcaagcattcagtgaactctgccgtctt
tacaaaggaacctcacggctggcactgctgactgagttgtgtcgctctcaaagcccagaa
aaatcttctgcccacaacccttacggtggggtttcctcaagcagcgtttttcagaatgag
aacttcaagttgcatttggcaccaccgcccatcattgatgattag
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integrated database retrieval system
