Bufo bufo (common toad): 121008090
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Entry
121008090 CDS
T07950
Symbol
ERCC4
Name
(RefSeq) DNA repair endonuclease XPF
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf03420
Nucleotide excision repair
bbuf03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
121008090 (ERCC4)
03460 Fanconi anemia pathway
121008090 (ERCC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbuf03032
]
121008090 (ERCC4)
03400 DNA repair and recombination proteins [BR:
bbuf03400
]
121008090 (ERCC4)
DNA replication proteins [BR:
bbuf03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
121008090 (ERCC4)
DNA repair and recombination proteins [BR:
bbuf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
121008090 (ERCC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
HHH_5
Motif
Other DBs
NCBI-GeneID:
121008090
NCBI-ProteinID:
XP_040296368
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All DBs
Position
7:58596864..58672656
Genome browser
AA seq
894 aa
AA seq
DB search
MAPLLEYENQIFLDLFHEDGLIIAARGLGIDRILQNFLKLYCDPGNLVLVLNTNTAEEEY
LIEQMRSEGVTDLPRIVTNEVSSNERYDVYTQGGVLFVTSRILVVDFLTDRIPANLITGI
LVYKAHKIMESCQEAFILRLYRQKNKQGFIKAFTDNPVAFHTGFCQVERVMRNLFVRKLY
LWPRFHVSVNSFLEKHKPEVVELHITMTPAMLAIQASILDIMNACLRELKRYNPALEVED
LSLENAIGRAFEKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLQYLSQYDCVTFLNLLE
SMRASEKAFGQNSGWLFLDSSTSMFVHARGRVYSIPESKSTKKCKTDEPNEKRDGKRELV
LESNPKWEALSEVLKEIEMENKTSDALGGPGRVLICASDDRTCAQLREYIAVGAEALLMR
LYNKTFGKDEKAAELWLKNRKTVKKKDSGTSGKNARAKTTKEGTSNQKRNLKKTELTLTQ
MIGKAEEDDVKDQDREESMSIESGVEEPNYEDLQLNLPSDCYYGVLKEPLTVIHPLQGCT
DPYALTRVLHEVDPRYVVLYDADLSFVRQLEIYRASMQKTLRVYFLVYGGSTEEQRYLTS
LRKEKEAFEKLIREKASMVIPEEREGRDDTNLDLQRDVTPASNATDTRKAGGQQKKNMQH
NIIVDMREFRSELPSLIHRRGIDIEPVTLEVGDYILTPDICVERKSVSDLIGSLNNGRLY
TQCVSMCRYYKRPILLIEFDPNKPFSLTSRSSIHQEISVNDITSKITLLTLHFPRLRILW
CPSPYATAELFEELKQNRPQPDAATAMAITADSETIPESEKYNPGPQDFLLKMPGVNAKN
CRAIMNHVKNIAELTTLSLERLSEILGNPNTAKQLYEFIHTSYAEAISQGKAKR
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atggctcccctcctggaatatgaaaatcaaatcttcctagacctgttccatgaggatggg
ctcatcatcgccgctcgtggactcggcattgatagaatcctgcagaatttcttgaagctt
tattgtgatcctgggaacttggtgctggtgctaaataccaatactgcagaggaggaatat
ctgattgaacagatgagatcagaaggagtcaccgacttgccacggattgtcaccaatgag
gtcagcagtaacgagcgctatgatgtatacacacaaggcggagtactgtttgtcactagt
cgcatccttgtggttgatttcctcactgataggattccagccaacttgataactggtatc
cttgtgtataaggcacacaagattatggagtcctgccaggaggccttcatactgcgctta
tatcggcaaaagaacaagcagggcttcataaaagccttcacggacaatccggtcgccttt
cacactggtttctgccaggtggaacgtgtaatgagaaatctgtttgtcagaaaactttat
ttatggccaaggtttcatgtgtctgtgaattcatttctggagaaacacaagcctgaagtg
gtggagctgcacatcacgatgaccccggccatgctggctatacaagcatccatattggat
ataatgaacgcgtgcctgagggagctcaaacgctacaatcctgctctggaagtggaagat
ctgtccctagagaatgccattggcagggcctttgaaaagactatacgccattacttggac
cccttgtggcatcagcttggagccaaaacgaaatctttggttcaggatttaaaaatcctc
cgcactcttttacagtacctgtctcagtatgactgtgtgacgttcctgaatctgctagag
tcaatgagagccagtgaaaaagcatttgggcaaaattcagggtggctgtttcttgactcg
agtacgtctatgtttgttcatgctcgaggccgggtctatagtattcctgaatctaaatct
accaaaaaatgtaaaactgatgaaccaaatgagaaacgggatgggaagagagagttggtt
ctagaaagcaatcctaagtgggaagctctgagtgaggttctgaaagagattgaaatggag
aacaagaccagtgatgctctcggtggaccaggccgtgtattgatttgtgccagcgatgat
cgtacctgtgctcagctgagagaatatattgcagtgggggccgaagcactgttgatgagg
ctgtacaacaaaacctttgggaaagatgaaaaagctgctgaactgtggctgaagaaccga
aaaactgtcaagaagaaggattcaggtacaagtgggaaaaatgctcgtgcaaagacgaca
aaagaaggcacaagtaatcagaaaagaaatttaaagaagactgaactgactttaacacag
atgattggtaaagcggaggaagatgatgtcaaagatcaggatagagaggaaagtatgagc
atagagagcggtgtagaagaaccgaactatgaagacctgcagttgaatttgccttcagac
tgttattacggtgtcttgaaggagcccctcactgtcatccatcctttgcaaggctgcact
gacccctatgcacttaccagggtactgcatgaagtggatccaagatacgttgtcctatat
gatgcagatctcagctttgtgcgacagcttgagatatacagggcaagcatgcaaaagact
ttaagagtttattttcttgtctatggtggatccacagaagagcagagatacctcacgtca
ctcaggaaggaaaaagaagcatttgagaagctgattagggagaaggccagcatggtaatc
cctgaggaaagagaaggaagagatgacacaaacttggatcttcagagagatgttactcct
gcctctaatgccactgatacccgtaaagctggaggccagcagaagaagaacatgcagcac
aacatcattgtggacatgagggaattccgcagcgagttaccatctctgatccacagacgc
ggcattgacatagaacctgtcactctagaagtgggagattatatcctgacgccagacata
tgtgtagagagaaaaagtgtgagtgacctgattggctcattgaacaatggacgtctctac
acgcagtgcgtttccatgtgccgatactacaagcggcctattcttctgatagaatttgac
cccaacaagccattctctctcacgtctcgaagttcaatccaccaggaaatttctgtgaat
gacatcacctcaaaaatcaccctcctcactctgcactttcctagacttcgtattctgtgg
tgtccgtcaccttatgccaccgcagaactgtttgaggagctgaagcagaacaggccacaa
cctgatgccgcgaccgccatggctattactgctgactcggaaaccattccagaatctgag
aaatataatccaggccctcaggacttccttctaaaaatgccaggggtcaatgccaaaaat
tgtcgagccataatgaatcatgtaaagaacatagcagagctgacaacgctatctctagag
aggttgtctgagattctcgggaaccctaacacagcaaaacaactttatgaattcattcac
acgtcttacgccgaggcaatttcccaggggaaagcgaaacgttga
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