Bufo bufo (common toad): 121008444
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Entry
121008444 CDS
T07950
Symbol
RAI1
Name
(RefSeq) retinoic acid-induced protein 1
KO
K19749
retinoic acid-induced protein 1
Organism
bbuf
Bufo bufo (common toad)
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bbuf03000
]
121008444 (RAI1)
Transcription factors [BR:
bbuf03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
121008444 (RAI1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
121008444
NCBI-ProteinID:
XP_040296932
LinkDB
All DBs
Position
7:20992263..21110307
Genome browser
AA seq
1798 aa
AA seq
DB search
MQSFRERCGFHGNQQNYQPSSQDSSRLENYRHQSHPGLNCVRQRQMTKGYYAQTSYQGYE
NNTGEKYPRGDKHMNVQQLQGRVSFATFPEGNVYPGQYSGEDGMQNWGQSQALSGAKYEE
NVIKKTPGENRGYQDPTGQIQFRSHSLHLPQQPNLPYTKLPQQKVQNDVPSSPLPFSQSS
HFSQNFPTSTYSSVPGNSPVSHSFKSCTSPSNPPHEHAMATAGQRVQSLHGYQSSRMASF
EQTQRQHAQETLHYQNMTKYHGQHYSQQGQAYCQPETPSRTPEQYYQTFSPSASHSPARS
VGRSPSYSSTPSPLMPNIENFQYNQQQHNANTFPMGISDHSHYMPLLNPSPTGTSSPESQ
TKGLQNDKIPETLLSDLSLQSLTALTSQVENISTTVQQLLMTKSGIPQKKAIKTSPRTPE
QMKGHHCSSESSAYSSEPMGTPLSETLGTPQSVHAEVQDTDYLSGSDDQLERNYLYCGPG
RSTARANSTKMKPESISTCSVTSPDNMSTKSDDSFQSINANLPLETFAKLVSSERECPHL
LVNALSQEELSTEIIALQDAIDNEKAEKAWVDSPELDNNSPKSPFNLENHTCVESVVKNT
WSDQENVQIFSEALKKGAPEKTHDNFNEDYYEKKEFQSPTEKVVEENTENSKGLGTEKNV
EPVTSSASYTSYSNTLANCARNSDPFDWPDKNMTESCLRWKEIELTLHSTDLQKGLFQSK
ESKVDSQPDVPDMETPLENDSGEEFNKEGAEEMAYQEDSKEDNVKWLEDTRDCYTEEDFQ
DIPDLPSQKESNLEPEDYSSFCDFSERKSFIYDESITKPARGSEALSSIDTPESLENPST
EEKENLVASSHLSCNSIMLLGPAVETESKVKSWFESTIPHIDDTKEKVEEDIEDSVLESG
AIQEAEEKKPETINNQPTPKTEEVTEKKSLRGRRSQCKIAESSVLLSSAPVQTLTDLNSK
SVTKITPARMCTRSTTAKVEPQGCGTSIKTPLQEKMTKKGAFGEKERAPYKTGRRGGKNA
LKIAPAPNDENVFLLQNNSPTVLDSTQKSNKNGFSILRDERSMILRSRSKKQELFPAKRR
RGKKGMNFVLKKRSYLKKIIANNCSAGDTFQMIPKIRKRMKLSDTAVGINVKNSERPLHS
LKRKSSLISPIPAKKRNLIIRGKKTKEPKSEAPPKLFKKMKPVKKEKVKLAITSKKNCKV
ILSPPSVRITQDVCLKVTSRASYHGPMKTKVLPPRKGRGLKMEAIVQKITSPNQKKQGAA
MAGTTHVLAINSSSVAQGRENKDGTLLGADANTKVMVHDLSRTESSKLKNEQHNGNCHGS
SNKTPLKGKPFYKKKGAPKLHGEAGLRNRAKRQANCLGSKKPSSIPKKKFRRGRSKSSPS
TSKVTVKKLLGSSPSVPLTSKNKALSDNVLLTNKSRSSECKQVRAKEISILPETSGDVLS
QTRTRKKSKNPVFNGYTKRQRKCSPRSRSTSQAPGTKRRSKRQNIPLVTPKEPEIKLKYV
SSKPARAESRVQLFSPYIQVEKKNAFTTTCTIVNSAGDEMRLLKERSTVHSSSPVTFSSQ
GSIPLSSRMQLGPLICKSVSSGCLLCCLCRCPANYKDLGDLCGPYYPMDCLPNKKPRPKD
KVKPEDTSTEKPSKTVEPLCTAVSGRTSCTDSGATEPVKHSSLRSSTRALLRKLPSCYCC
NKKAEGTDAEKPKRHHCTKSSESHSLEVETKEHWVHEACAVWTSGVYLVAGKLYGVHEAI
QMAASGLCPRCQKPGATVGCSHKGCTQTYHYTCATEAGCLLNEENFSLRCPKHKRHLV
NT seq
5397 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcttttcgggaaaggtgtggtttccacggcaaccagcagaactaccaaccatct
tcacaggattcctcacgcctggagaattataggcatcaaagtcacccggggctcaactgt
gtgcgtcagagacagatgaccaaagggtactatgcccagacgtcctatcaaggttacgag
aacaatactggggagaaatacccccgtggtgacaagcacatgaatgtccaacagcttcaa
ggcagggtctcttttgctactttccctgagggcaatgtgtatcctggacagtattctgga
gaagatgggatgcaaaattgggggcaatctcaggctttgagtggggcaaaatatgaggaa
aacgtaataaagaagacccctggagaaaacagggggtatcaagatccaactggacaaata
caattccgttcccactctctacacctcccccagcaaccaaaccttccttacactaagctt
ccacagcagaaggtccagaatgatgtcccatcttccccgctgcctttttcccagtcatcc
cacttcagccaaaattttccaacttccacatactcttccgtgccagggaacagcccagta
tctcattccttcaaaagttgcacatccccttccaaccctccacatgaacatgctatggct
actgccggccaacgggtgcaatccctgcatggctaccagtcatcaagaatggcttccttt
gagcaaacgcagcgccaacatgcacaggaaactttgcactaccagaacatgactaagtac
catgggcaacattacagccaacaaggccaagcatattgtcaacctgagactcccagtaga
actccagagcagtattatcaaaccttcagtccaagtgccagccattctccagcccgctct
gtgggcagatccccatcttatagttccactccctctccactaatgccaaacattgagaac
tttcaatacaaccagcaacaacataacgctaatacattccctatgggtatttctgatcac
agccactacatgcctctcctcaatccttcacctacgggcacctccagtccagagtctcaa
acaaaaggtttgcagaatgacaaaattccagagaccttgctatctgacctcagtttgcaa
agccttacagctctcacttcacaagtagagaacatctcaacaactgttcagcaacttctt
atgaccaagtctggaattccacagaagaaagcgattaagacttctccaaggacccctgag
caaatgaaaggacatcattgcagttcagagagtagtgcttactcatctgaaccaatgggg
acacctctttcagaaacccttggtactccacaatctgtccatgccgaggtccaagataca
gactaccttagcggttctgatgaccagctagagaggaattacttgtattgtggtccagga
cgaagcacagccagggccaacagtaccaaaatgaagccagaatccatctccacatgttct
gtgacatcgcctgacaacatgtctacaaagtctgatgattcatttcagagcatcaacgcc
aatctcccattggagacttttgcaaaactggtgagcagcgaaagagagtgtccacactta
ctggttaatgctttgtcccaagaggagttgtctacagaaatcattgctctacaagatgcc
attgataatgagaaagcagaaaaagcttgggtcgattctccggaattggataataattca
ccaaaatccccattcaacttagaaaatcatacttgcgtggaatcagtggtcaaaaacacg
tggtcagatcaggagaatgtacagatattttcagaagctttgaagaaaggtgcaccagaa
aaaactcatgataactttaatgaagactattacgaaaaaaaagaatttcaatcacctact
gaaaaggttgtcgaagaaaacacagaaaattctaaaggtttgggcacagagaagaatgtg
gaaccagtgacatctagcgctagctataccagttactcaaatacactggcaaattgcgca
agaaattctgatccctttgactggccagataaaaacatgaccgagtcttgccttcggtgg
aaagaaattgagctaactcttcattctactgatctccaaaaaggtttgtttcaaagcaag
gaaagtaaagttgatagtcagcctgatgttcctgatatggagacacccctggaaaacgac
tctggggaggagttcaataaagagggggctgaagagatggcgtaccaagaagacagcaaa
gaagacaatgttaagtggttggaagacactagggactgctacactgaagaggatttccaa
gacatacccgatcttccctcccagaaagaatcaaatctagaaccagaagactattcctca
ttctgtgacttctctgaaagaaaatctttcatttatgatgaatctattacaaaaccggcc
agaggttctgaagcattatcttccattgatacaccagagtccttagaaaatccaagcacc
gaagaaaaggagaatttggtggcatcatcacatttgtcatgtaattctatcatgttgctc
ggtcctgccgttgaaacagagtcgaaagtgaaaagctggtttgaatccacaataccgcac
attgacgacacaaaagaaaaagttgaagaagacatcgaagacagtgtgctagaatcagga
gccattcaagaagcagaagaaaaaaaacctgaaacaataaataatcagccaactccaaaa
actgaagaagtcactgaaaagaaatctctgagaggtcgaaggagtcaatgcaaaattgct
gaaagttctgtgctcctgtctagtgctcctgtccagactctgacagatctaaatagtaaa
tctgtgaccaaaatcactccagcaaggatgtgcacccgttccactaccgccaaggtagaa
cctcaaggatgtggaactagtataaagacacctcttcaagagaagatgactaagaaagga
gcatttggtgaaaaggagagggccccatataaaactggtaggagaggtgggaaaaatgcc
ctgaaaatagcaccagcacctaatgacgaaaatgtgttccttctgcaaaataactcgcca
acagttcttgacagcactcagaaatcaaataaaaatggcttcagtattctgagggatgag
cgatctatgattctaaggtcaagaagcaagaagcaggagctcttcccagcaaagagaaga
agaggaaagaagggaatgaactttgtcctgaagaagcgttcatacttaaagaaaataatc
gccaacaattgctctgctggggatacatttcagatgataccaaaaatcaggaaaaggatg
aagctctcagacacagcagtgggaataaatgtaaaaaattcagaacggcctttgcattct
ctgaagaggaagtcaagcttaatttctccgattccggccaaaaagcgaaacctgatcata
cgtggcaaaaagactaaagagccaaagtcagaggcccctcccaaattattcaaaaaaatg
aagccagtcaaaaaagagaaggtcaagttagcaataacttcgaagaagaactgtaaggtt
atcctaagtcccccttctgtccgaataacccaagatgtttgcctgaaggtgacctcacgc
gcatcatatcatgggccaatgaagacaaaggtcttgcctccgagaaagggcagaggtttg
aaaatggaagccatagttcaaaaaattacatcgccaaaccaaaagaaacaaggtgctgcc
atggcaggaacaacacatgttttagctattaacagcagtagtgttgcccaaggaagggaa
aataaagatggcaccttactaggggcagatgccaacaccaaggtaatggttcatgatctg
agccgtactgaatcttcgaagctgaagaatgaacaacataatgggaattgtcatgggtca
agcaacaagactcctctcaaaggaaaacccttctacaagaagaaaggagctccaaagcta
catggagaggctggcttacggaatagggccaagagacaagccaactgtctaggttcgaaa
aagcctagttctatccccaaaaagaagtttagaagaggtagatccaaaagttctccgagc
acttctaaagtgacagtaaagaagttgcttggttcctctccatctgtgcctcttacgtct
aaaaataaagctctatcggacaatgttctcttgaccaataagtctcgctcaagtgagtgc
aaacaggtgagggccaaagagatctccattctccctgagacatctggggacgtcttgtcc
caaaccagaactaggaaaaaatctaagaatccagtcttcaatggctacaccaagaggcaa
cgtaagtgttctcctcgaagcaggtccaccagccaagctcctggaaccaagcgaaggtca
aagaggcaaaacattcctcttgttacacccaaagagccggaaattaaattgaagtatgtg
tcctctaaaccggcccgggctgaaagcagagtccaactcttctccccatatattcaggtg
gagaaaaaaaatgctttcactactacttgtaccatcgtcaattctgctggcgacgaaatg
agattattgaaggagagaagtacagtccactcttcgtctccggtcacattttctagccaa
ggttcgatacctctttcttctaggatgcagttgggacctctcatctgcaagtcggtgagc
tccggttgtcttctctgttgcctgtgccgttgccctgccaactataaagacttgggtgat
ctttgcggcccatattaccccatggactgtttacctaacaagaaaccccggccgaaagat
aaagtcaaaccagaggacacgtcgacagagaagccctccaagacggtagaacctctttgc
acagcagtgagcgggaggacgtcttgcacggacagtggagccactgagccagtcaaacac
agtagtctccgttctagcacccgtgcattgctcaggaagctgcccagctgttactgctgt
aataaaaaggcagaggggacagacgctgaaaagcccaagaggcaccattgcaccaaaagc
tctgagtctcattcactggaagtagagacaaaggagcactgggtccatgaagcttgtgcg
gtgtggaccagcggagtttacctagtggctggaaaactttatggtgtccatgaagctata
cagatggcagcttcaggactctgtcccaggtgtcaaaagccaggagcgactgtgggctgc
agtcacaagggatgcacacagacctaccactacacgtgcgcaacggaggcaggttgcttg
ttaaatgaagagaacttctcattaagatgtcctaaacataagaggcacctggtgtaa
DBGET
integrated database retrieval system
