Bufo bufo (common toad): 121008975
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Entry
121008975 CDS
T07950
Symbol
TOP3A
Name
(RefSeq) DNA topoisomerase 3-alpha isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf03440
Homologous recombination
bbuf03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
121008975 (TOP3A)
03460 Fanconi anemia pathway
121008975 (TOP3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbuf03032
]
121008975 (TOP3A)
03400 DNA repair and recombination proteins [BR:
bbuf03400
]
121008975 (TOP3A)
Enzymes [BR:
bbuf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
121008975 (TOP3A)
DNA replication proteins [BR:
bbuf03032
]
Eukaryotic type
DNA Topoisomerases
121008975 (TOP3A)
DNA repair and recombination proteins [BR:
bbuf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
121008975 (TOP3A)
FA (Fanconi anemia) pathway
121008975 (TOP3A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-CCHC_2
zf-C2H2_10
Motif
Other DBs
NCBI-GeneID:
121008975
NCBI-ProteinID:
XP_040297760
LinkDB
All DBs
Position
7
Genome browser
AA seq
1013 aa
AA seq
DB search
MTLRSILLFTGRLTRFNIRSCSRNCASMSPRAPVQKVLCVAEKNDAAKGIADIMSNGRMR
RREGLSKFNKLYEYEYHLFGRDVSVTMTSVSGHLLALDFQSHLKSWHSCNPVSLFDAEVE
KFCPSDFLNIKKTLEREVRQCQALIIWTDCDREGENIGFEIIHVCKAVKSNLQVFRARFS
EITPRSIRAACENLAPPDQNVSDAVDVRMELDLRIGAAFTRFQTLRLQKIFPTVLSSQLI
SYGSCQFPTLGFVVERFKAIQAFIPETFYKIKVTHEHEDGNVEFNWKRNRLFNHTACLVL
YQICMEDPTATVVQVGSKPKSKWRPVALDTVEMEKLASRKLKIGAKETMKIAEKLYTQGF
ISYPRTETNIFPKDLNLTTLVEQQTNDQQWGGFAQRILERGGPTPRNGSKTDQAHPPIHP
TKYTNSLQGNEQRIYEFIVRHFLACCSQDAQGLETTVEIDIAAERFIAHGLMIIARNYLD
VYPYDKWNTKIIPVYEMGSRFQPTTVEMVDGETSPPQLLTEADLISLMEKHGIGTDATHA
EHIETIKSRMYVGLTPEQRFLPGELGMGLVEGYDSMGFEMSKPDLRSELEADLKLICEGK
KDKFSVLRQQVQKYKQVFIEAVAKATKLDEALSQYFGQAQPVEEQIYAETPLPVRKCPQC
NRDMVLKTKRDGGFYISCLGYPSCKTSVWFPSSVLEVSRDESVCDVCRPHPVHKLKFKFK
RGSVPPLMPLEFVGCIGGCDETLREVLDLKYLQGGNRAAPQSGPRENNHLQMNQSNNRMG
NSRDGHSRQPPAKKERQPKLVAPAVPATRASGDENNEVVCNCGVSAVQLTVRKEGPNQGR
PFYKCDGGNCNFFLWADQEGGAGRSAPPPQSSGGHLSTSSYTSARESVGFRTGGGSGDAR
SEGQATCMCNQPAVTRTVQKDGANKGRQFHTCSKPREQQCGFFQWADENVPPGGSNNFPS
VFGGGSTAERGSGAKSKRSDYGSSDRGPTAKKPRTCGICHQPGHNRTNCPQNR
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgaccttgagaagtattttactgttcaccgggcgactgacacgtttcaacatccgctcc
tgttcccggaactgcgcaagtatgtcgccgagagcccccgtccagaaggtcctgtgcgtg
gccgagaagaacgatgccgccaaggggatcgcggacatcatgtctaacgggaggatgagg
aggagggaaggactgtcaaagtttaacaagctttacgagtatgaatatcatctttttgga
cgggacgtctccgtcacgatgacttcggtgtccggacatcttctagcgctggacttccag
agtcacctgaaatcctggcacagttgtaaccccgtctccctgtttgatgcagaagttgag
aaattttgtccgagtgattttctgaacataaagaaaaccctggagcgggaggtgcggcag
tgccaggcgctcatcatctggacggattgcgatcgagaaggggagaacattggctttgag
attatccatgtctgtaaagcagtgaagtcgaatctgcaggtgttcagggcgcgcttctct
gagatcaccccccgatccatccgagcggcctgcgagaacctcgctcctcccgaccagaac
gtcagcgacgctgtggatgtgcggatggagctggaccttcgaataggcgccgctttcacc
cggttccagactctgcgcctccagaagatatttcccactgttttgtccagtcagctcatc
agctatgggagttgtcagttccccacgctggggtttgtagtagagagattcaaagccatc
caggcctttatacccgagaccttctataaaatcaaagtgactcatgaacatgaagacgga
aatgtggagtttaactggaagagaaatcgtctttttaaccacaccgcctgcctggtcctg
tatcagatctgcatggaggatcccaccgctactgttgttcaggtcgggagtaaaccaaaa
agcaagtggaggccggtggctctggacaccgtggaaatggaaaaattggcctctagaaaa
ctgaaaattggagccaaagaaaccatgaagattgcggagaagctctatacacagggtttt
atcagctacccccgcacagaaaccaatatttttcctaaggatctgaacctcacaacactg
gttgagcagcagacgaatgatcagcagtggggtggatttgcacaacgtatcctggagagg
ggtgggccgactccaagaaatggaagcaagacagatcaggcccatccccccatacaccct
accaagtataccaacagtctgcagggtaatgagcaacgcatctacgagtttattgtgcgc
cacttcttggcgtgctgctcccaggacgctcagggcctggagaccacagtggagattgac
attgctgctgagcggtttattgcccacggactgatgatcatcgccaggaactatctcgat
gtttacccgtatgataaatggaacactaagataatcccggtgtatgagatgggctctaga
tttcagcccacaacggtggagatggtggatggagagaccagccctccgcagctcctcaca
gaagcagatctcatctccttgatggaaaagcatggcatagggactgacgccacccacgcg
gagcacatagagaccattaaatcccgcatgtacgtaggtctgaccccagagcagaggttc
ctccctggagagctggggatgggcctggtggaaggatatgattctatgggctttgagatg
tccaagccggacctgcgttccgaattggaggccgacctcaagctgatctgtgaaggcaag
aaggacaagttctccgtcttgagacagcaggttcagaagtacaagcaggtcttcatagaa
gctgtggccaaggccaccaagctggacgaggcgttgtcccagtattttggacaggcccaa
cccgtggaagagcagatttacgcagaaacaccgctcccagtacggaaatgtccacagtgc
aaccgggatatggttctgaagaccaagagagatggagggttctacatttcctgcctggga
tacccgagttgtaagacatccgtctggttccccagctccgtcttggaggtgtcgcgagac
gagagcgtgtgcgacgtatgcagacctcatcctgtgcacaagctgaagtttaagtttaaa
cgcgggagcgtgcccccgctgatgcctctggagtttgtggggtgcatcggtggctgtgat
gaaacccttcgagaagtcctagatctaaagtacctgcagggaggcaacagagcagcccct
caatccggcccaagggagaataaccacctgcagatgaaccagtccaacaaccgcatgggc
aactccagagacgggcacagccgccagccacctgccaagaaggagaggcaaccaaaactc
gttgctcctgccgtcccggcaaccagagcatccggcgatgagaataatgaggtggtctgc
aactgcggcgttagtgccgtgcagctgactgtacgcaaggaggggcccaaccaaggccgc
ccgttttataaatgcgacggaggaaactgcaacttctttttgtgggcggatcaggagggc
ggagctggaaggagtgccccacccccgcagagctcaggagggcatctttcgacttcttca
tacactagtgcccgggaatctgtagggttcaggactggaggtggaagcggtgacgcgaga
tccgagggtcaggcaacgtgtatgtgcaatcagccggccgtcactcggacggtgcagaaa
gacggcgccaacaagggccgacaatttcacacgtgttccaaacccagagagcagcagtgc
gggttcttccagtgggcggatgagaatgtaccaccagggggttccaacaactttcccagt
gtctttggagggggctccacagcagagcggggttccggcgcaaagagcaaacgctctgac
tacggctcttcagaccgagggccgacagcgaaaaagccacggacttgtggcatatgtcac
cagcccggacacaacaggaccaactgcccccagaacagatga
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integrated database retrieval system
