Bufo bufo (common toad): 121008975
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Entry
121008975 CDS
T07950
Symbol
TOP3A
Name
(RefSeq) DNA topoisomerase 3-alpha isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf03440
Homologous recombination
bbuf03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
121008975 (TOP3A)
03460 Fanconi anemia pathway
121008975 (TOP3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbuf03032
]
121008975 (TOP3A)
03400 DNA repair and recombination proteins [BR:
bbuf03400
]
121008975 (TOP3A)
Enzymes [BR:
bbuf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
121008975 (TOP3A)
DNA replication proteins [BR:
bbuf03032
]
Eukaryotic type
DNA Topoisomerases
121008975 (TOP3A)
DNA repair and recombination proteins [BR:
bbuf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
121008975 (TOP3A)
FA (Fanconi anemia) pathway
121008975 (TOP3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-CCHC_2
zf-C2H2_10
Motif
Other DBs
NCBI-GeneID:
121008975
NCBI-ProteinID:
XP_040297760
LinkDB
All DBs
Position
7:complement(21428526..21444375)
Genome browser
AA seq
1013 aa
AA seq
DB search
MTLRSILLFTGRLTRFNIRSCSRNCASMSPRAPVQKVLCVAEKNDAAKGIADIMSNGRMR
RREGLSKFNKLYEYEYHLFGRDVSVTMTSVSGHLLALDFQSHLKSWHSCNPVSLFDAEVE
KFCPSDFLNIKKTLEREVRQCQALIIWTDCDREGENIGFEIIHVCKAVKSNLQVFRARFS
EITPRSIRAACENLAPPDQNVSDAVDVRMELDLRIGAAFTRFQTLRLQKIFPTVLSSQLI
SYGSCQFPTLGFVVERFKAIQAFIPETFYKIKVTHEHEDGNVEFNWKRNRLFNHTACLVL
YQICMEDPTATVVQVGSKPKSKWRPVALDTVEMEKLASRKLKIGAKETMKIAEKLYTQGF
ISYPRTETNIFPKDLNLTTLVEQQTNDQQWGGFAQRILERGGPTPRNGSKTDQAHPPIHP
TKYTNSLQGNEQRIYEFIVRHFLACCSQDAQGLETTVEIDIAAERFIAHGLMIIARNYLD
VYPYDKWNTKIIPVYEMGSRFQPTTVEMVDGETSPPQLLTEADLISLMEKHGIGTDATHA
EHIETIKSRMYVGLTPEQRFLPGELGMGLVEGYDSMGFEMSKPDLRSELEADLKLICEGK
KDKFSVLRQQVQKYKQVFIEAVAKATKLDEALSQYFGQAQPVEEQIYAETPLPVRKCPQC
NRDMVLKTKRDGGFYISCLGYPSCKTSVWFPSSVLEVSRDESVCDVCRPHPVHKLKFKFK
RGSVPPLMPLEFVGCIGGCDETLREVLDLKYLQGGNRAAPQSGPRENNHLQMNQSNNRMG
NSRDGHSRQPPAKKERQPKLVAPAVPATRASGDENNEVVCNCGVSAVQLTVRKEGPNQGR
PFYKCDGGNCNFFLWADQEGGAGRSAPPPQSSGGHLSTSSYTSARESVGFRTGGGSGDAR
SEGQATCMCNQPAVTRTVQKDGANKGRQFHTCSKPREQQCGFFQWADENVPPGGSNNFPS
VFGGGSTAERGSGAKSKRSDYGSSDRGPTAKKPRTCGICHQPGHNRTNCPQNR
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgaccttgagaagtattttactgttcaccgggcgactgacacgtttcaacatccgctcc
tgttcccggaactgcgcaagtatgtcgccgagagcccccgtccagaaggtcctgtgcgtg
gccgagaagaacgatgccgccaaggggatcgcggacatcatgtctaacgggaggatgagg
aggagggaaggactgtcaaagtttaacaagctttacgagtatgaatatcatctttttgga
cgggacgtctccgtcacgatgacttcggtgtccggacatcttctagcgctggacttccag
agtcacctgaaatcctggcacagttgtaaccccgtctccctgtttgatgcagaagttgag
aaattttgtccgagtgattttctgaacataaagaaaaccctggagcgggaggtgcggcag
tgccaggcgctcatcatctggacggattgcgatcgagaaggggagaacattggctttgag
attatccatgtctgtaaagcagtgaagtcgaatctgcaggtgttcagggcgcgcttctct
gagatcaccccccgatccatccgagcggcctgcgagaacctcgctcctcccgaccagaac
gtcagcgacgctgtggatgtgcggatggagctggaccttcgaataggcgccgctttcacc
cggttccagactctgcgcctccagaagatatttcccactgttttgtccagtcagctcatc
agctatgggagttgtcagttccccacgctggggtttgtagtagagagattcaaagccatc
caggcctttatacccgagaccttctataaaatcaaagtgactcatgaacatgaagacgga
aatgtggagtttaactggaagagaaatcgtctttttaaccacaccgcctgcctggtcctg
tatcagatctgcatggaggatcccaccgctactgttgttcaggtcgggagtaaaccaaaa
agcaagtggaggccggtggctctggacaccgtggaaatggaaaaattggcctctagaaaa
ctgaaaattggagccaaagaaaccatgaagattgcggagaagctctatacacagggtttt
atcagctacccccgcacagaaaccaatatttttcctaaggatctgaacctcacaacactg
gttgagcagcagacgaatgatcagcagtggggtggatttgcacaacgtatcctggagagg
ggtgggccgactccaagaaatggaagcaagacagatcaggcccatccccccatacaccct
accaagtataccaacagtctgcagggtaatgagcaacgcatctacgagtttattgtgcgc
cacttcttggcgtgctgctcccaggacgctcagggcctggagaccacagtggagattgac
attgctgctgagcggtttattgcccacggactgatgatcatcgccaggaactatctcgat
gtttacccgtatgataaatggaacactaagataatcccggtgtatgagatgggctctaga
tttcagcccacaacggtggagatggtggatggagagaccagccctccgcagctcctcaca
gaagcagatctcatctccttgatggaaaagcatggcatagggactgacgccacccacgcg
gagcacatagagaccattaaatcccgcatgtacgtaggtctgaccccagagcagaggttc
ctccctggagagctggggatgggcctggtggaaggatatgattctatgggctttgagatg
tccaagccggacctgcgttccgaattggaggccgacctcaagctgatctgtgaaggcaag
aaggacaagttctccgtcttgagacagcaggttcagaagtacaagcaggtcttcatagaa
gctgtggccaaggccaccaagctggacgaggcgttgtcccagtattttggacaggcccaa
cccgtggaagagcagatttacgcagaaacaccgctcccagtacggaaatgtccacagtgc
aaccgggatatggttctgaagaccaagagagatggagggttctacatttcctgcctggga
tacccgagttgtaagacatccgtctggttccccagctccgtcttggaggtgtcgcgagac
gagagcgtgtgcgacgtatgcagacctcatcctgtgcacaagctgaagtttaagtttaaa
cgcgggagcgtgcccccgctgatgcctctggagtttgtggggtgcatcggtggctgtgat
gaaacccttcgagaagtcctagatctaaagtacctgcagggaggcaacagagcagcccct
caatccggcccaagggagaataaccacctgcagatgaaccagtccaacaaccgcatgggc
aactccagagacgggcacagccgccagccacctgccaagaaggagaggcaaccaaaactc
gttgctcctgccgtcccggcaaccagagcatccggcgatgagaataatgaggtggtctgc
aactgcggcgttagtgccgtgcagctgactgtacgcaaggaggggcccaaccaaggccgc
ccgttttataaatgcgacggaggaaactgcaacttctttttgtgggcggatcaggagggc
ggagctggaaggagtgccccacccccgcagagctcaggagggcatctttcgacttcttca
tacactagtgcccgggaatctgtagggttcaggactggaggtggaagcggtgacgcgaga
tccgagggtcaggcaacgtgtatgtgcaatcagccggccgtcactcggacggtgcagaaa
gacggcgccaacaagggccgacaatttcacacgtgttccaaacccagagagcagcagtgc
gggttcttccagtgggcggatgagaatgtaccaccagggggttccaacaactttcccagt
gtctttggagggggctccacagcagagcggggttccggcgcaaagagcaaacgctctgac
tacggctcttcagaccgagggccgacagcgaaaaagccacggacttgtggcatatgtcac
cagcccggacacaacaggaccaactgcccccagaacagatga
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integrated database retrieval system
