Bufo bufo (common toad): 121009304
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Entry
121009304 CDS
T07950
Symbol
COL4A6
Name
(RefSeq) collagen alpha-6(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
bbuf
Bufo bufo (common toad)
Pathway
bbuf04382
Cornified envelope formation
bbuf04510
Focal adhesion
bbuf04512
ECM-receptor interaction
bbuf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121009304 (COL4A6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121009304 (COL4A6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
121009304 (COL4A6)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
121009304 (COL4A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bbuf04147
]
121009304 (COL4A6)
00536 Glycosaminoglycan binding proteins [BR:
bbuf00536
]
121009304 (COL4A6)
Exosome [BR:
bbuf04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
121009304 (COL4A6)
Glycosaminoglycan binding proteins [BR:
bbuf00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
121009304 (COL4A6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
121009304
NCBI-ProteinID:
XP_040298261
LinkDB
All DBs
Position
8:complement(126326483..126598302)
Genome browser
AA seq
1704 aa
AA seq
DB search
MRARTCLLLLLLAACFVADLVQAGGKKTYQGPCAGRDCSGGCKCFPEKGARGRPGQLGPQ
GPMGPPGFQGPTGISGPKGERGYQGSPGPSGPKGDQGAMGVPGFQGANGIPGHSGQPGHR
GFPGLDGCNGTKGDDGYPGPPGFQGSPGSSGFSGPKGQKGEPSFAQGEIKGPKGDDGLNG
IDGFPGPRGPPGPQGPTGPAGPPGLAGPPGMPGFPGPKGNMGVGYQGEKGDKGDTGRQGE
PGPPASSGMEFFATFLKGIPGDLGDFGPLGSPGLPGPPGPPGFRGQGEKGEKGIPGLPGQ
RGFPGQDGLDGFPGNKGQTGLAGGPGREGFKGMKGEPGDLGFPGSPVYINNGGAAIQGFP
GDPGPPGFQGMPGDDGDFGPPGPPGPPGFPAFGRGFPGSPGFQGVPGSKGERGDNGRPAF
GQNGTPGRVGPLGPPGPPGPPGLPAFRSQRLERGERGEPGENGLQGPPGKIGAKGNKGDF
GDCACRGGTVGNGRVGDPGPAGPPGTDGFPGFDGQPGDPGRRGSEGPAGPPGSAGQPGGP
GPKGEKGDPIFPSGRGSRGDPGSVGLRGAPGFSGNPGRDGRPGSAGRKGAPGEGGIGNPG
EKGFPGQPGQKGSRGESGLPGVGFPGLPGSRGLPGDPGLPGLDGRAGEPGPPGDCCCGDN
VGNGDLVTEGGLTLPCIIAGEVGDPGIPGNPGLPGPKGENGFSGIPGLRGFDGAKGQPGS
PGLGGFPGPPGFTGPRGDEGPIGFPGLDGIDGLPGKPGIPGLPGFKGARGEVLGAEPGAP
GEPGRPGVIGDKGIRGESGFDGQRGLDGRPGLMGAKGEKGNAGFPGSQGPRGFPGFGGAA
GIKGRQGPVGETGFPGSPGCQGFPGAKGVPGDRGAPSPVGTKGRPGPDGDPGRPGELGPP
GSPGPSGRDALSGFPGSKGDKGSPGLIGFPGMPGLPGLPGGVGIKGSSGFPGRDGIPGLN
GRKGEQGSTGDPGPRGPEKLVDLSELRGDRGDPGRAGRPGFPGPRGDKGFPGVPGSSGLP
GLPGSPGLEKGRPGDAGFPGANGRPGSPGLKGAQGIVGFPGMPGPVGAEGLPGTPGFAGP
SGQPGIKGERGESLGQSSIPGPKGEPGNPGSRGFKGFPGDVGRIGTPGSPGLKGQAGDTG
RPGQPGSPGLQGFRGNPGFVGNPGLPGRPGFPGPVGAPGVKGFRGFPGLDGLNGLPGTRG
LPGTPGLSEAGRPGSPGFPGSKGERGFSNTVPGQPGINGVKGVSGDSGLPGVPGPPGPSG
PPGTSTVIPGIPGDPGPAGRHGELGLPGLPGPRGPPGPASNQGDTGDSGVPGGPGRPGFK
GDSGIPGNPGSSGAPGVKGLRGDPGFMGVPGKEGPVGDSGFFGSKGERGNAGFQGPVGRP
GLPPVDDFQYALGNPGLPGINGFDGGPGDRGAQGPSGQPGGKGFPGRQGQMGRNGPSGQP
GFIGDPGEPGFPGLPGFEGAPGKQGVAGLPGMPGRSVGVGYTLVKHSQAEQIPPCPVGMS
KLWDGYSLLYVEGQEKAHSQDLGLAGSCLPRFTTMPFIYCNLNEVCYYASRNDKSYWLST
TAPIPMMPVSSTQIRNYISRCSVCEAPSQAVAVHSQDNTIPQCPEGWRSLWIGYSFLMHT
AAGAEGGGQSLVSPGSCLEDFRATPFIECNGGRGTCHYFANKYSFWLTTVEERRQFGAAP
PSETLKSGQLRTRVSRCQVCMKNL
NT seq
5115 nt
NT seq
+upstream
nt +downstream
nt
atgagggcacgaacttgcctgctgctgctgcttcttgctgcctgctttgttgcggacttg
gtgcaagcgggaggaaagaagacctatcaggggccatgtgcaggacgagattgcagcggg
ggctgcaaatgttttccagagaaaggagctcgaggtcgtcctggacagcttgggccacag
ggcccgatggggcccccaggatttcaagggccaactggcatttccggacctaaaggtgaa
agagggtatcaaggatcaccaggaccatctggacctaaaggagaccagggtgctatggga
gttcctgggtttcagggtgctaatgggattccaggtcatagcggacagccaggtcataga
ggttttcctggactagatgggtgtaatggtactaaaggagatgatggctaccctgggcct
ccaggatttcaagggagtccaggttcatcaggattttcaggcccaaaaggccaaaaggga
gaaccttcctttgctcagggtgaaattaaaggaccaaagggtgatgatggactaaacgga
attgatggttttcctgggccacggggaccacctggacctcaaggtccaacagggccagct
gggccacctggcttagcaggtccaccggggatgcccggcttcccaggtccaaaaggtaac
atgggagtaggttatcaaggcgagaagggagataagggagacactggccgtcagggtgaa
ccaggacctcctgcttcaagtggaatggaattctttgcaacttttctgaaaggaatccct
ggagacctaggtgattttggtcctcttggatctcccgggttgcctggaccacctggtcct
ccagggtttagaggacaaggagaaaaaggggaaaagggtattcccggtctgcctggtcaa
aggggctttcctggacaagatggtcttgatgggtttccgggtaacaagggtcagaccggt
cttgctgggggtccaggacgtgaaggtttcaaagggatgaagggtgaaccaggagactta
ggttttccaggaagcccagtatatattaataacggtggtgcagcaattcaaggttttcca
ggagatccaggacctcctggattccagggaatgccaggggacgatggagactttggtcca
cctggtcctcctggtccccccggatttccagcgtttggaaggggctttcctggtagtcca
ggatttcaaggtgttccaggatctaagggggaaaggggagacaatggaagaccagctttt
gggcaaaatggtaccccaggaagagttggtccactagggccacctggcccaccagggcca
ccaggacttccagcttttcgttcacaacgattagaaagaggtgagcgtggggaaccagga
gaaaatggtttgcaagggccaccaggaaaaattggagccaaaggaaataaaggagacttt
ggtgactgtgcatgccgtggtggtactgttggcaatggaagagttggagatcccggacct
gcaggcccaccaggaactgatggatttcctggattcgatggacaacctggcgatcctggc
agaagaggatcagagggcccagctggacctcctggatctgcaggacaacctggtggtcca
ggaccaaaaggagaaaagggagatccaatatttccttctggcagaggatcacgtggagac
ccaggatctgttggacttagaggggcacctggattttcgggaaacccaggcagggatggc
cgaccagggtctgctggtcgaaaaggcgcacctggtgaaggtggaattggcaacccgggg
gagaagggttttccaggtcaacctggtcaaaagggaagtcgaggagaaagtggacttcca
ggtgttggctttccaggtttacctggttctcgtgggcttcctggtgacccaggtttaccg
ggactggatggacgagcaggtgaacctggacctcctggtgactgctgctgcggggacaat
gttggtaatggagacttagtcacagagggaggcctcaccttgccatgtataattgctgga
gaagttggagatccaggaattcccggcaaccctgggcttccaggtcccaagggtgaaaac
ggattctcaggaattcctgggctacgtggctttgatggcgccaaaggacaaccaggtagc
ccaggacttggtggatttccaggacctccaggatttactggacctcgtggagatgaaggt
cctattggttttcctggcttggatggcattgatggactaccgggaaaaccaggaatccct
ggtttgcctggttttaaaggagcacgtggtgaagttttgggtgctgaacctggtgctcct
ggtgagcctggaagaccaggtgtcataggagataaaggaattagaggagaatctggtttt
gatggacagagaggtttagatggacgtcctgggctaatgggtgctaaaggtgaaaagggt
aatgctggttttcctggtagccaaggtcccagaggattccctggatttggaggtgcagct
ggtattaaaggaagacaaggtcctgtgggagaaactggatttccagggtcaccgggctgc
caaggttttccgggagcaaagggtgtacctggagatagaggagcccctagcccagttggg
acaaaaggtcgtccaggtcctgatggagatcctggtcgcccgggagagttaggacctcct
ggatcgccaggtcctagcggacgtgatgctttgtctggcttcccaggatctaaaggtgat
aaaggctctccaggtttgattggctttcctggaatgcctggtctgccagggcttcctggt
ggtgttggaataaaaggatcttctggatttcctggaagagatggcattcctggtctgaat
gggagaaaaggagagcaaggcagtacaggtgatccaggcccacgaggccctgaaaaactt
gtagaccttagtgaactgagaggagatcgtggtgacccaggaagagcagggcgcccaggt
ttccctggaccaagaggtgataaaggatttcctggtgttcctggttcatctggacttcca
ggtttgccaggttccccggggctagagaagggtagacctggagatgctggtttcccagga
gcaaatggaaggccaggtagccctggattgaaaggagcacaaggaatcgtaggttttccg
gggatgccaggaccagttggtgcagaaggattacctggaaccccaggttttgctggcccc
tccggtcaacctggaattaaaggtgaacgtggagaatcactgggacagtctagtattcca
gggcccaaaggagaaccaggaaatccaggttcaagaggattcaaaggatttccaggagat
gttggacgaattggaactccaggaagccctggactgaaaggccaagctggagatacaggg
cgtccaggacaaccaggttccccaggcctgcagggatttagaggaaaccctggatttgtg
ggaaacccaggtttaccaggacgcccaggattccccggacctgtaggagctccaggtgtt
aaaggttttcgaggatttccaggtttggatggactaaatggtttgcctggcacaaggggc
ttacctggcacgcctggtttaagtgaagcaggacgcccaggatcaccaggatttccaggt
tctaaaggcgaaaggggcttctccaacacagtacctggacagccagggattaatggtgta
aaaggtgttagtggagattcaggcttacctggtgttcctggcccccctggaccttccgga
cctcctggaacatcaactgttatccctggaatacctggagaccctggacccgccggaaga
catggagagttgggactgcctggccttcctggtccacgtggacccccaggacctgcctca
aatcaaggagatacaggagattctggagtaccgggaggaccaggaagacctggattcaag
ggagattcaggaataccaggaaaccctggaagctccggagcacctggagtaaaaggtctc
aggggggatcccggtttcatgggtgttccaggaaaagaaggtcctgtcggagattctgga
ttttttggttctaaaggagaaaggggcaatgcaggttttcaaggtcctgtcggacgtcca
ggtcttcctcctgttgatgattttcagtatgcgcttgggaatcctggtctgcctggaatt
aatggctttgatggtgggcctggagatcgtggtgcacaaggaccatcaggacaacctggt
ggaaaaggctttcctggcaggcaagggcagatgggaagaaatggtccttcgggtcagcct
ggctttattggtgatcccggtgagcctggatttccaggactcccaggatttgaaggtgcc
ccaggaaagcaaggcgtggcaggattacccggtatgcctggacggagtgtgggcgttggg
tatactttggtaaaacacagccaggcagaacagattcctccatgtcctgttggcatgagc
aagctttgggatggttacagtctgctgtacgtagaaggacaggaaaaggctcacagtcaa
gacctgggtctcgccggatcttgtttacctcgatttaccaccatgccttttatttattgc
aacctcaatgaggtttgctactatgccagcaggaatgacaaatcgtactggctctctact
actgcacctattcccatgatgccagtgtccagcacacagattagaaactacatcagccgc
tgctctgtgtgcgaggctccttctcaagctgttgctgttcacagccaagacaacacaatc
cctcagtgcccagaaggttggaggagtctctggataggatactctttccttatgcacaca
gcagctggtgccgaaggaggtggtcagtccttggtatcccccgggtcatgtttagaagat
ttccgggctacacctttcattgaatgcaatggaggaagaggaacttgccattattttgca
aataagtacagtttctggcttacgactgtggaagagaggcgacagtttggtgctgctcct
ccttctgaaacactgaaatctggacagcttcgaacacgtgtgagccgctgtcaggtttgc
atgaagaacttgtag
DBGET
integrated database retrieval system
