Bufo bufo (common toad): 121009318
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Entry
121009318 CDS
T07950
Symbol
RLIM
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
bbuf
Bufo bufo (common toad)
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bbuf04121
]
121009318 (RLIM)
Enzymes [BR:
bbuf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121009318 (RLIM)
Ubiquitin system [BR:
bbuf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121009318 (RLIM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
Trypan_PARP
zf-C3HC4_3
zf-RING_UBOX
DUF3199
zf-RING_16
Prok-RING_4
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
121009318
NCBI-ProteinID:
XP_040298288
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All DBs
Position
8:103557856..103601673
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AA seq
661 aa
AA seq
DB search
MESTDSPGKGSSEQSDSQRQSQMDRLDREEAFYQFVNNLNEEDYRLMRDNNLLGTPGEIT
KEELLRRLQQIKEGPPQPNAENEASTGGTPEDSSNGDSIIDWLNSVRQTGNTTRSGQRGN
QSWRAVSRTNPNSGDFRFSLEINVNRNAANQNMPSAEQSSETNGAEDMEVSSQVEGEPEP
EPEPEPEPEPEPEPEPEPEPEPEPEPEPEIIPPVMVQEQVVTEEPSPQRGQRRARSRSPD
QRRIRARTDRSRSPLNRPVEQPTRRAQHSPVQTVNAPPAVEEAEGSSRTRQLVTAYLSSS
TSEAEGSSRTRQHVTSRLQALATESQNPSVVLSNPEPGASPQPPPTETPENAEPTGTGQR
PPTIVLDLQVRRVRPGEYRQRDSIANRTRSRSQTPNNTVTYESERGGFRRTFSRSERAGV
RTYVSTIRIPIRRILNTGLSETTSVAIQTMLRQIMTGFGELSYFMYSDNDAEPGTPAAAS
QPIAVGVETQNIVTPNASPPPPPPPPPPPPPPPPPPPVPEPPVEPPIPVVEPDDANAEIV
STSGGRREVRNRRSVTFEESGSLPFLRLAQFFLLNEDDDDQPRGLTKEQIDNLSTRNYGE
NDALKTCSVCITEYAEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLVPSNRESV
V
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggaaagtaccgattcacctgggaaaggaagttctgaacagtccgattctcaacgccag
agtcagatggaccgcctggaccgagaggaagctttctatcagtttgtgaataacctgaac
gaagaggactaccggttaatgagggataataatttattaggaactccaggggaaattact
aaagaggagcttctgagaagattgcaacaaatcaaagaaggaccacctcaaccgaatgct
gaaaacgaagcttctacaggggggacacctgaggactcttccaatggagattcaataatc
gactggttgaattcggttagacagactggaaatacaacaagaagtggtcagcggggcaac
cagtcttggagggcagtgagcagaaccaatccaaatagtggtgattttaggtttagtttg
gaaataaatgtgaatcgtaatgccgctaatcagaatatgccttcagctgagcagtcatca
gaaaccaatggagctgaagatatggaagtcagtagtcaggttgagggtgaacctgagcca
gaacctgaaccagaaccagaacctgaacctgaaccagagccagagcctgaacctgaacca
gagcctgaaccagaacctgaacctgaaattataccccctgttatggtacaagagcaagta
gttactgaggagccaagtcctcagagaggtcaaaggagggcaagaagtcgaagcccagac
cagcgaaggatcagggcaaggactgatcgaagcagatcacctctaaatcgacctgtggag
caaccaactcgaagggctcaacatagtccagtacagactgttaatgctcctcctgctgtt
gaggaagcagagggtagctctagaaccaggcagcttgtaactgcatacctgagcagttct
acttctgaggcggagggaagctctagaactagacagcatgtaacttccagactacaagca
cttgctaccgaatctcagaatcccagtgtagtgctttcaaatccagagccaggagcttct
ccccagcctcctcccacagagactccagaaaatgcagaacctacaggcactggtcaaagg
ccaccaaccatagttttagatcttcaggttaggcgggtacgtccaggggagtatcgtcaa
agagatagcattgcaaacaggacacgctcgcgctctcagacccctaacaatacagtcact
tacgagagtgaacggggaggattccgtcgcacgttctcacggtcagagcgagctggtgtc
aggacatatgtcagtactatcagaatcccaatccgtaggatactaaacacaggcctgagt
gaaaccacctctgttgctatccagaccatgctacggcagataatgactggttttggggag
ctaagctactttatgtatagtgataacgatgcagagcctggcactcctgcagctgcctct
caaccaatagccgtgggggtggaaacccagaacattgttacaccaaatgccagtccacct
cctccaccaccaccgccgccaccaccaccaccaccaccaccaccgccgcctgtacctgag
cctcctgtagaaccacccatccctgttgtggaacctgacgatgccaacgcagaaattgtg
tcaacttctgggggtaggagggaagttcgtaacagaagatctgtcaccttcgaagaaagt
ggatctctgccatttcttaggctggctcagttttttttgcttaatgaagatgatgatgat
caaccaaggggactcaccaaagaacaaattgacaacctgtcaactcgtaattatggtgaa
aatgatgccctgaaaacttgtagcgtgtgcataacagagtacgcagaggggaacaagctc
cgcaagctcccttgttcacatgagtaccacgtccactgtattgatcgctggctgtctgaa
aactctacttgtccaatctgtcgccgagctgttctggtgcctagcaacagggaaagtgtg
gtgtaa
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