Bufo bufo (common toad): 121009609
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Entry
121009609 CDS
T07950
Symbol
SAMD4B
Name
(RefSeq) protein Smaug homolog 2 isoform X1
KO
K27396
protein Smaug
Organism
bbuf
Bufo bufo (common toad)
Brite
KEGG Orthology (KO) [BR:
bbuf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbuf03019
]
121009609 (SAMD4B)
Messenger RNA biogenesis [BR:
bbuf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
121009609 (SAMD4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
PHAT
Motif
Other DBs
NCBI-GeneID:
121009609
NCBI-ProteinID:
XP_040298769
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All DBs
Position
8:193834930..193864267
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AA seq
677 aa
AA seq
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MKFRDQVSTLSEWFKGWNECEQTVALLSLLKRITRTQARFLQLCLEHSLSDCSEIHILET
EANSAALISQWHQESNKKVISLLLSHLPLLQPRNSEAKCEYMKLLQKVLAYTTESNLYIE
ESRQLLSYALIHPATTLDDRNSLALWLNHLEERLSTGYSRHGTHLRQGSDEWQAPGEPSM
GESGHSWHEKPMRENGLMPFPSSSSVPSAIQNVGGSSVLSCQMHPSPLKRSMSLIPTSQQ
TSNEWGGAEEAAGRSVFLTPDHAPLSPQSSVASSGSEQTEEYGSGRNTFSEDGSGMKDVP
TWLKSLRLHKYASLFSQMSYEEMMMLTEQHLESQNVTKGARHKIALSIQKLRERQIVLRS
LEKDILDGGNVRNALQELQQIIITPIKYYRPNQTESVGSEQTSQHRPNQDSASKGSNENE
PPTGLTADGFQQQSTPTGDLETSVPPIADGDIPGQLTRVLGKVCTQLLVSRPDEENITCY
LQLLEKCLTHEAFTETQKKRILSWKQQVLKLLRTFPRKALLEMQGYRQQKGCSWAFASNS
LPIAGSVGPSLVRRGQRPFQMPPRAVPPSRIGVMSPGSIGGVSPRHALTSQSTGSQGRQN
LWFANPGGSNSMPCQSHSSVQRTHSLPVHTSPQSILKFPPDCQVPGADLEINPRLESLCL
SMTEHALEEGTDKTSTI
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgaaattccgagaccaggtgagcacattatccgagtggtttaagggctggaacgagtgc
gagcagacggtggcccttctttcgctcctgaagaggattaccaggacccaggcacgattc
ctacagctctgcttggagcactcactctcggactgctctgagatacacatccttgagacg
gaggccaacagtgctgctctgatcagtcagtggcaccaggagtctaataagaaggtgatc
tcgctgctgttgtcccacctgcctctgctgcagccccgcaactcggaagccaaatgcgag
tacatgaaactgctgcagaaagtgctggcgtacaccactgagagcaacctgtacatcgag
gagagccggcagctcctgtcctatgcactcatccatccggccaccacgctggacgatcgc
aactctctggctctgtggctcaaccatctggaagagcgactgtccacaggctacagccgg
catggcacacatctgcggcagggttctgatgagtggcaggccccaggggaacccagcatg
ggagagtctgggcatagttggcacgaaaagccaatgcgagaaaatggacttatgcccttc
ccctcttccagttcggtgccctcagccatccagaatgtgggtggtagctcagtgctctcc
tgccaaatgcacccaagtcccttgaaacgctccatgtccctgatccccacctcccagcaa
acgtctaacgagtggggcggggcagaggaggctgccgggcgatccgtcttcctcacccca
gaccacgctcccctctccccgcagagcagcgtggcttcatcgggcagtgagcagacagag
gagtatggctctggacgcaacacattttcggaggacggcagcgggatgaaagatgtcccc
acctggctgaaaagtttacgtctgcacaaatatgcatcgctgttctctcagatgagctat
gaagaaatgatgatgctgacggagcagcacctcgaatcacaaaatgttactaaaggggca
cggcataaaattgcattgagcatccagaagttacgcgagagacagatcgtgctccgttca
ctagagaaggatattctagatggcggaaatgtgcgcaacgctctgcaggagcttcagcag
atcattatcacacctatcaaatactaccgccccaatcagacggaatcagtaggcagcgag
cagacgtcccaacacaggcccaatcaggattctgccagcaagggctccaatgagaatgag
ccgcccacaggtctgacagcggatggcttccagcagcagagtaccccgactggtgaccta
gagacttctgtgccgcctatagcagatggcgacatccccggacaacttaccagagtgctg
ggtaaagtctgcactcagttgttggtctcccggccggatgaggagaatataacctgttac
ctgcagctactagaaaagtgcctgacacatgaggcatttaccgagacgcagaaaaaaaga
atcctctcctggaaacagcaagtcctgaagctgctgcgaacatttcctcgcaaggcttta
ctggaaatgcaggggtacagacaacagaaggggtgcagctgggcatttgcttcaaattcc
ctccccatagctggatctgtggggccatcattagttcgaagagggcagcgcccatttcag
atgcccccaagggctgtaccgccttcccgcattggtgtcatgagccctgggtcaattggg
ggcgtctctccaagacacgcacttaccagccaaagcactgggagccagggtcgacagaac
ctgtggttcgccaatcctggaggaagtaatagcatgccatgccagagtcacagctccgtg
cagcgcacccactcgttacccgtgcacacttcgccacagagtatcctcaagtttcctcct
gattgccaggttcctggggcggatctggagattaatccccggctggagtctttatgcctg
agtatgacggagcatgcgctggaggagggtacagacaagacatcgacaatctga
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