Brevundimonas bullata: U0030_06490
Help
Entry
U0030_06490 CDS
T10190
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bbul Brevundimonas bullata
Brite
KEGG Orthology (KO) [BR:
bbul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbul03032
]
U0030_06490 (topA)
03400 DNA repair and recombination proteins [BR:
bbul03400
]
U0030_06490 (topA)
Enzymes [BR:
bbul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
U0030_06490 (topA)
DNA replication proteins [BR:
bbul03032
]
Prokaryotic type
DNA Topoisomerases
U0030_06490 (topA)
DNA repair and recombination proteins [BR:
bbul03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
U0030_06490 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
KARI_N
Motif
Other DBs
NCBI-ProteinID:
WQE38111
LinkDB
All DBs
Position
complement(1316121..1318781)
Genome browser
AA seq
886 aa
AA seq
DB search
MNLVIVESPAKAKTINKYLGSGYEVLASYGHIRDLPSKDGSVLPDDDFAMVWEVDAKASK
RLSEIAEAAKRADRVILATDPDREGEAISWHVLEVLNKKKALKDTEVQRVTFNAITKAAV
LEAMANPRQLDMELVEAYLARRALDYLVGFNLSPVLWRKLPGARSAGRVQSVALRIVVDR
EMEIEKFKAQEYWSVEADLVADSPPFTTRLVKHAGKRIQRLDIPTEEMAFAARDAIKAGD
FTIKSVEKKPAKRSPAPPFTTSTLQQEASRKLGFTAQRTMQAAQKLYEGVDDTGGLITYM
RTDGLFVSPEGIAQAREVIADRFGPAYVPAEPRYYKTKAKNAQEAHEAIRPTNLTRHPDS
LRIDSDLQRLYELIWKRMIASQMESARLDRTTVEIETPDGQTGLRATGQVVAFDGFIAAY
EEGRDEKQKGSEDEEDDGGRLPALKEGAKAKVEAVRTDQHFTEPPPRFSEATLVKKLEEL
GIGRPSTYASILTTLRDREYVRMDKNRFYPEDKGRLVTAFLEQFFSRWVEYDFTAALETQ
LDEVSAGELDWKALLRSFWTDFHAATQAAGELRTTAILDHLNDALGAHIFPDKGDGSDPR
ECPLCHQGQLSLKTSRFGAFIGCSRYPDCKYTRPVASPDGAEGGADGGDRELGVDPATGQ
PVQLKIGRFGPYVETTPPGEEKPKRSSLPKGWSPASLTLEQALRLLALPREVGPHPEDGK
MITAGLGRYGPFVLHAGTYANVSDIDEVFEVGINRAVALLAEKRAGRPGRGSATAPLKEL
GTHPEDEAPVQVMAGRFGPYVKWGKVNATLPKGMAPEDLTLEDALPLLAAKAGATPKKKA
AAAKKPAAKKAPAKTAAEKKPATAKKSAAKKPAAKKAAPKKAADVE
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcgtcatcgtcgagagccccgccaaggccaagaccatcaataaatacctgggt
tctggctacgaggtgctggcttcctacggccacatccgcgacctgccgtccaaggacggc
tccgtcctgcccgacgacgatttcgccatggtctgggaggtcgacgccaaggcgtccaag
cgcctgtccgagattgcggaggcggccaagcgcgccgaccgcgtcatcctcgcgaccgac
cccgaccgtgagggagaggcgatcagctggcacgttctggaagtcctgaacaagaagaag
gcgctgaaggacaccgaggtccagcgcgtcaccttcaacgccatcaccaaggccgccgtg
ctggaagccatggccaatccgcgtcagctggatatggagctggtcgaggcctatctggcc
cgccgcgcgctggactatctggtgggcttcaacctgtcgcccgtcctgtggcgcaagctg
cccggcgcccgttcggcgggccgggtgcaatcggtcgccctgcgcatcgtcgtcgatcgc
gagatggagatcgagaagttcaaggcccaggaatactggtcggtcgaagccgacctcgtc
gccgacagcccccccttcaccacgcgcctggtcaagcacgccggcaagcgcatccagcgt
ctggacatcccgaccgaggaaatggccttcgccgcgcgcgacgccatcaaggccggcgac
ttcaccatcaagtcggtcgagaagaagccggccaagcgctcgccggctccgcccttcacc
acctcgaccctgcaacaggaagcctcgcgcaaactgggcttcaccgcccagcgcaccatg
caggcggcgcaaaaattgtatgagggcgtcgacgacaccggcgggttgatcacctacatg
cggaccgacggcctgttcgtcagccccgagggcatcgcccaggcgcgcgaggtcatcgcc
gaccgcttcggccccgcctatgtcccggctgagccgcgctactacaagaccaaggccaag
aacgcccaggaagcgcacgaagccatccgtccgaccaatctgacgcgccatcctgacagc
ctgcgcatcgattccgacctgcaacgcctctatgagctgatctggaaacggatgatcgcc
tcgcagatggagagcgcccgtctggaccgcaccacggtcgagatcgagacgcccgacggc
cagaccggcctgcgcgccacgggccaggtcgtcgccttcgacggcttcatcgccgcctac
gaagaaggccgcgacgagaagcagaagggctccgaagacgaggaggacgacggcggtcgc
ctgcccgccctgaaggaaggcgccaaggccaaggtcgaagccgtccgcaccgaccagcac
ttcaccgagccgccgccgcgcttctcggaagccaccctggtcaagaagctggaagagctg
ggcatcggccgtccctcgacttacgcctcgatcctgacgaccctgcgcgaccgtgaatac
gtccgcatggacaagaaccgcttctatcccgaggacaagggacggctggtcacggccttc
ctggagcagttcttcagccgctgggtcgagtacgacttcaccgccgcgcttgagacccag
ctcgacgaggtctccgccggcgaactggactggaaggcgctgctgcgcagcttctggacc
gacttccacgccgcgacgcaagccgccggcgaactgcgcaccacggccatcctggatcac
ctgaacgacgccctgggcgcccacatcttcccggacaagggcgatgggtctgatccgcgc
gaatgccccctgtgtcatcagggccagctcagcctgaagaccagccgcttcggcgccttc
atcggctgctcgcgctatcccgactgcaaatacacccgcccggtcgcctcgcctgacggc
gccgaaggcggcgcggacggcggcgaccgcgaactgggcgtcgatccggcgaccggccag
ccggtgcagctcaagatcggccgcttcggtccctatgtcgaaaccacgccgcccggcgag
gaaaagcccaagcgctcgtccctgcccaagggctggagcccggcgtccctgacgctggag
caggccctgcgtctgctggccctgccgcgcgaagtcggtcctcaccccgaggacggcaag
atgatcacggcgggtctgggtcgttacggcccgttcgtcctgcacgccggcacctacgcc
aatgtctcggacatcgacgaggtgttcgaggtcgggatcaaccgcgcggtcgccctattg
gctgaaaagcgcgccggtcgacccggtcgcggctcggccacggccccgctcaaggaactg
ggcacccaccccgaagacgaagcccccgttcaggtcatggctggtcgcttcggcccctac
gtcaaatggggcaaggtcaacgccaccctgcccaagggcatggcgcccgaagacctgacg
ctggaagacgccctgcccctattggccgccaaggccggcgcgacgccgaagaagaaggcg
gctgcggccaagaagcctgcggcgaagaaggctccggccaagaccgctgctgagaagaag
cctgcaacggccaagaagtccgccgccaagaagccggcggcaaagaaggccgcgcccaag
aaggcggctgacgtcgagtag
DBGET
integrated database retrieval system
