Brevundimonas bullata: U0030_10535
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Entry
U0030_10535 CDS
T10190
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bbul Brevundimonas bullata
Brite
KEGG Orthology (KO) [BR:
bbul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbul03032
]
U0030_10535
03400 DNA repair and recombination proteins [BR:
bbul03400
]
U0030_10535
Enzymes [BR:
bbul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
U0030_10535
DNA replication proteins [BR:
bbul03032
]
Prokaryotic type
DNA Topoisomerases
U0030_10535
DNA repair and recombination proteins [BR:
bbul03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
U0030_10535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
WQE35727
LinkDB
All DBs
Position
2146379..2147401
Genome browser
AA seq
340 aa
AA seq
DB search
MPDGAARLPTAPDIPEGLSWCNDDSLGLTRRRSGKGFSYRDRDGQPIRDARTLDRIRALA
IPPAWTEVWICPRANGHIQATGRDLKGRKQYRYHPDWTRHAANAKFDRLAAFARKLPKLR
ERVEQDLARRGPCRDKVLATAVRLLEITLIRVGNAEYARQNRSFGLTTLHKRHLEVDGAA
LTFEFRGKSGKDHRISVRDQRLARTLRTLEGLPGQHLFKYRDGDGDLHAVTSDDVNAYIR
DALGEQFSAKDFRTWAGTAAAARALRDMEPPTSPTDARRKVTLCVKAVSGLLGNTPTVCR
AAYVHPRVLDLFENGGLAEALPGAEAKGFEPRLIRLLSPQ
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacggcgccgcccgccttccgaccgccccggacatccctgagggactcagctgg
tgcaatgacgacagcctgggcctcacccgtcgccgctcgggcaaggggttttcctatcgc
gaccgcgacggacagcccattcgtgacgccaggacgctggaccgcatccgcgccctggcc
atcccgcccgcctggaccgaggtctggatctgcccgcgcgccaacggccatatccaggcg
acgggccgcgacctcaagggacgcaagcaataccgctatcaccccgactggacccgccac
gccgccaacgccaagttcgaccgcctggccgccttcgcccgcaagctgccgaaactgcgc
gagcgggtggaacaggatctggcacgacgcgggccgtgccgggacaaggtgctggccacc
gccgtccgcctgctggagatcaccctgatccgcgtcggcaacgccgaatacgcccgccag
aaccgcagcttcggcctgaccaccctgcacaagcgtcatctggaggtggacggcgccgcc
ctgacctttgagttccgcggcaagagcggcaaggaccaccggatcagcgtccgcgaccag
cgcctggcccgcaccctgcgcacactggagggcctgcccggccagcatctgttcaagtat
cgcgacggcgacggcgacctgcatgccgtcacctcggacgacgtgaacgcctatattcgc
gacgccctgggcgagcagttctcagccaaggacttccgcacctgggccggaacggcagcc
gccgcccgcgccctgcgcgacatggagccgccgacctcccccaccgacgcccggcgcaaa
gtcaccctctgcgtcaaggcggtgtccggcctgctcggcaacacccccacggtctgccgc
gccgcctacgtccacccgcgcgtgctggacctgttcgaaaacggcggccttgccgaagcc
ctgcccggcgcggaggccaaaggcttcgagccccgcctgatccggctgctgtcgccccaa
tga
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