Brevundimonas bullata: U0030_16330
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Entry
U0030_16330 CDS
T10190
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bbul Brevundimonas bullata
Pathway
bbul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
U0030_16330 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbul03019
]
U0030_16330 (pnp)
03016 Transfer RNA biogenesis [BR:
bbul03016
]
U0030_16330 (pnp)
Enzymes [BR:
bbul01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
U0030_16330 (pnp)
Messenger RNA biogenesis [BR:
bbul03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
U0030_16330 (pnp)
Transfer RNA biogenesis [BR:
bbul03016
]
Prokaryotic type
tRNA degradation factors
U0030_16330 (pnp)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
OB_PDCD11
PHB_acc_N
Motif
Other DBs
NCBI-ProteinID:
WQE36803
LinkDB
All DBs
Position
3364641..3366875
Genome browser
AA seq
744 aa
AA seq
DB search
MFDIKRKTIEWAGRPLTLETGRIARQADGAVLATYGETVVLATVVYGRQPKPGLDFFPLT
VNYQEKTFAAGKIPGGYFKREGRPSEKETLVSRLIDRPIRPLFVKGFKNETQVVITVLQH
DMENDPDIVGMVAASAALTISGVPFMGPIGAARVGLIDGELVLNPAIDTLADSTLDLVVA
GTQDALMMVESEAKELSEEKMLEALMFAHAGMQPVIDAIIELAEHAAKEPFDFQAEDHSD
VVASIKKLVGEDIKAAYAHPGKYERRSGVDAAKKTAAAALVKSDENPEGVDSSKFSAAFK
ECEADVLRRDIIENAHRVDGRALDKVRAIVSEVGVLPRTHGSSLFTRGETQALVVATLGT
GEDEQYIDSLSGTYKESFLLHYNFPPYSVGEAGRMGSPGRREIGHGKLAWRAIRPMLPTK
EDFPYTIRLVSEITESNGSSSMATVCGSSLALMDAGVPLIRPVSGIAMGLILEPSGEFAI
LSDILGDEDHLGDMDFKVAGTSEGITSLQMDIKVAGITKEIMEQALTQASAGRLHILDEM
SKAMDAPRAELGEHAPKIETIKIPVDKIREVIGSGGKVIREIVEKTGAKIDIGDDGTIKV
AANDQEKIDAAKAWIQSIASEPELGMIYSGKVVKVVDFGAFVNFFGAKDGLVHVSQIALE
RVANPADVLSEGQEVKVKFLGFDDRGKTKLSMKVVDQETGEDITDKINAERAERGEAPLS
DDTGGRPKREGDRNGGDRGRRRRD
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgttcgatatcaaacgcaagacgatcgagtgggccggccgcccgctgacgctggaaacc
ggccgcatcgcccgtcaggctgacggcgccgtgctggcgacctacggcgagaccgtggtt
ctggccaccgtcgtctatggccgtcagcccaagccgggcctggatttcttccccctgacc
gtcaactaccaagagaagacgttcgccgccggcaagatcccgggcggttacttcaagcgt
gaaggccgtccgtcggaaaaagagaccctggtctcgcgcctgatcgaccgtccgatccgc
cccctgttcgtcaagggcttcaagaacgagacccaggtcgtcatcaccgtgctgcagcac
gacatggagaacgacccggacatcgtcggcatggtcgccgcctcggccgccctgaccatc
tcgggcgtgcccttcatgggcccgatcggcgccgcgcgcgtcggcctgatcgacggcgag
ctggtgctgaacccggccatcgacaccctggctgactccacgctggacctggtcgtcgcc
ggtacgcaagacgccctgatgatggtcgaatccgaagccaaggagctgtcggaagagaag
atgctcgaggccctgatgttcgcgcacgcgggcatgcagccggtcatcgacgccatcatc
gaactggccgaacacgccgccaaggagcccttcgacttccaggccgaagaccactccgac
gtcgtcgcctcgatcaagaagctggtcggcgaagacatcaaggccgcctacgcccacccg
ggcaagtatgagcgccgttcgggcgtcgacgcggccaagaagaccgccgccgccgccctg
gtgaagtccgacgagaaccctgagggcgtcgactcgtccaagttctcggccgccttcaag
gaatgcgaagccgacgtcctgcgtcgcgacatcatcgagaacgcccaccgcgtcgacggc
cgcgccctcgacaaggtccgggccatcgtttcggaagtcggcgtcctgccgcgcacccac
ggttcgtcgctgttcacgcgcggcgaaacccaggccctggtcgtcgccacgctcggcacc
ggcgaggacgagcagtacatcgacagcctgtcgggcacgtacaaggaatccttcctgctg
cactacaacttccccccctattcggtgggtgaagcgggccgcatgggttcgcccggccgt
cgcgaaatcggtcacggcaagctggcctggcgcgcgatccgtccgatgctgccgaccaag
gaagacttcccctacaccatccgtctggtctccgagatcaccgagtccaacggctcgtcc
tcgatggccacggtctgcggttcgtcgctggctctgatggacgccggcgtgccgctgatc
cgtccggtctcgggcatcgccatgggtctgatcctggagccgtcgggcgagttcgccatc
ctgtccgacatcctgggtgacgaagatcacctgggcgacatggacttcaaggtcgcgggc
acctcggaaggcatcaccagccttcagatggacatcaaggtcgccggcatcaccaaggag
atcatggaacaggctctgacgcaggcttcggccggtcgtctgcacatcctcgacgaaatg
tcgaaggccatggacgccccgcgcgctgagctgggcgagcacgctccgaagatcgaaacg
atcaagatcccggtcgacaagatccgtgaagtgatcggttcgggcggcaaggtcatccgc
gagatcgtcgagaagaccggcgccaagatcgacatcggcgatgacggcaccatcaaggtc
gccgccaacgaccaggagaagatcgacgccgccaaggcctggattcagtccatcgcctcg
gaacccgagctgggcatgatctactccggcaaggtcgtgaaggttgtcgacttcggcgcc
ttcgtgaacttcttcggcgccaaggacggcctggtccacgtgtcccagatcgctctggaa
cgcgtcgccaacccggccgacgtcctgtcggaaggccaggaggtcaaggtcaagttcctg
ggcttcgacgatcgcggcaagaccaagctgtcgatgaaggtcgtcgaccaggaaaccggc
gaagacatcaccgacaagatcaacgccgagcgcgctgaacgcggtgaagccccgctgtcc
gacgacaccggcggccgtcccaagcgtgaaggcgaccgcaacggcggcgaccgcggccgt
cgccgtcgcgactag
DBGET
integrated database retrieval system
