Buteo buteo (common buzzard): 142026188
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Entry
142026188 CDS
T11399
Symbol
COL11A2
Name
(RefSeq) collagen alpha-2(XI) chain isoform X1
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
bbut Buteo buteo (common buzzard)
Pathway
bbut04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bbut00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
142026188 (COL11A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
bbut00536
]
142026188 (COL11A2)
Glycosaminoglycan binding proteins [BR:
bbut00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
142026188 (COL11A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Laminin_G_2
Laminin_G_1
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
142026188
NCBI-ProteinID:
XP_074875140
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All DBs
Position
32:complement(1013921..1035777)
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AA seq
1752 aa
AA seq
DB search
MARPCPVLPLVLLGLGIASVRPAAAAPGEPVDVLKILQLHSLPEGVKKVPGFCSQRGAGS
DVAYRINRQAQLSAPTRQLFAGKFPEDFSIMALVKAKPGIQAFLLSVYNQDGIQQLGVEL
GRSPVFLYEDQHGRPAPEDYPLFRGVDLADGKWHRVALSVSRRSVTLLVDCRQRETRPLP
RSARPVLDTRGITVFGTRILDEEVFQGDIQQLLVAPDPQAAFDYCEHYGPSCAATAAGGP
QAQEPPRQRQEYSEEAVEYYEYPYYYTNSEDGPPPGGVPEEDGGLPPTEEPWGATAYPDY
APVPPRDPDGASWEETGPTQEEEEEEEDEDGGPSRAYEYVYTDHPEELGAARGVRGYKGE
KGEPAVLEPGMLVEGPPGPEGPAGMSGPPGTQGPPGAPGEPGERGPPGRAGLPGSDGTPG
PPGTSMMLPFRFGSSGGDKGPVVAAQEAQAQAILQQARLALRGPPGPMGYTGRPGPMGQP
GSTGMKGESGDFGPQGPRGPQGLTGPPGKPGRRGRPGADGARGMPGDPGVKGDRGFDGLP
GLPGDKGHRGETGSQGMPGPPGEDGERGDDGEVGPRGLPGEAGPRGLLGPKGPPGIPGPP
GVRGMDGPVGPKGNLGPQGEPGPPGQQGTPGTQGLPGPQGAMGPPGEKGPQGKPGLPGMP
GSDGPPGHPGKEGPPGTKGNQGPSGPQGPIGYPGPRGVKGVDGIRGLKGHKGEKGEEGFP
GFKGDMGVKGDRGEVGVPGSRGEDGPEGPKGRTGPTGDPGPIGLVGEKGKLGVPGLPGYP
GRQGPKGSQGFPGFPGSNGEKGARGLSGKSGPRGERGPTGPRGQRGPRGATGKSGAKGTS
GSDGPHGPPGERGLPGPQGPNGFPGPKGPPGPPGKDGLPGHPGQRGEVGFQGKTGPPGPP
GVVGPQGAAGESGPMGERGHPGPPGPPGEQGLPGPSGKEGTKGDPGPTGSPGKDGPAGLR
GFPGERGLPGTPGGPGLKGNEGPAGPPGPAGSPGERGGPGQGGPVGPPGRPGPQGPPGPA
GEKGVPGEKGPMGPAGRDGVQGPVGLPGPAGPPGGPGEDGDKGEVGEPGQKGSKGNKGEH
GPPGPPGPIGSVGQPGAAGADGEPGARGPQGHFGAKGDEGTRGFNGPPGPIGLQGLPGPA
GEKGETGDVGPMGPPGPPGPRGPAGPSGADGPQGPPGGVGNLGPPGEKGDPGESGAPGIQ
GEPGVKGPRGERGEKGEAGAAGAAGPPGGKGPPGDDGPKGNPGPVGFPGDPGPPGEMGPR
GQDGAKGERGEDGEPGEPGSPGPTGENGPPGPLGKRGPAGSPGPEGRQGEKGAKGEPGAV
GAPGKTGPVGPQGLAGKQGPDGLRGLPGSVGEQGKPGTTGQAGPPGPVGPPGLPGLKGDT
GAKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGSTGQKGETGIPGATGPIGPAGPPGLP
GPAGPKGAKGAMGQAGPKGERGPPGPPGHPGPPGEVIQPLPIQLPKKSKRSIDASKLVDE
EEGEDGERAAADQAARDYADGMEEIFGSLNSLKQEIEGLRRPTGTRDNPARTCQDLQLSH
PGLPDGEYWIDPNQGCARDSFKVYCNFTAGGETCVFPSKDVQEVKMSAWEEEVPQRWFSQ
FQEGSRFSYMDSESQPLGVVQLTFLRLLSISARQNFTFHCHRSVAWHSTISRDHQHALRF
LAANEEEISYDTSPYIKAVMDGCSARKGSSRTVLEVSTPRLEQLPLLDVRVMDFGEPGQR
FGFEVGPVCFLG
NT seq
5259 nt
NT seq
+upstream
nt +downstream
nt
atggcccgaccctgcccggtgctgcccctcgtcctgctcgggctcggcatcgcctcggtc
cggccggcggcggcggctccaggagaacccgtggacgtgctgaagatcctccagctccac
tccctgcccgaaggcgtcaagaaggtgccgggtttctgctcccaacgcggcgctggctcc
gacgtcgcctaccggataaatcggcaggcgcagctcagcgctcccacccgacagctcttt
gccggtaaattcccggaggatttctccatcatggccttggtgaaagccaaacccggcatc
caggcgttcctcctctccgtctacaaccaggatggcatccagcagctgggcgtcgagctc
ggccgctcgcccgtcttcctctacgaagaccaacacggccgcccggcccccgaggattat
ccccttttccggggcgtcgatttggccgacggcaagtggcaccgggtggccctgagcgtc
agccggcggtcggtgacgctgctggtggattgtcggcagcgggagacgcgaccccttccc
cgcagcgcccggcccgtccttgacacccgcggcatcaccgttttcggcacccgtatcctc
gacgaggaggttttccagggtgacatccagcagctgctcgtcgcccccgacccgcaagcg
gcgttcgactactgcgagcactacggtcccagctgcgccgcgacggcggccggcggcccc
caggcgcaggaacccccccggcagcggcaggagtactccgaggaggctgtggagtactac
gagtacccctactactacactaatagtgaggatgggccccccccggggggggtccctgaa
gaggatggggggctaccccccacggaggagccttggggggccaccgcgtatccggattac
gccccggtgcccccccgggaccccgacggtgcctcctgggaggagacggggccgacgcag
gaggaggaggaggaggaggaggatgaggatgggggtccaagccgggcgtatgagtacgtc
tatacggaccaccctgaggagctgggcgctgcgcgcggcgtcaggggctacaagggcgag
aagggcgagcctgccgtcctcgaaccgggcatgttggtggagggaccccccggtcccgag
ggacctgcgggcatgtcgggaccaccggggacgcagggacccccaggagccccgggagag
cccggtgagaggggtccccctggccgtgctggcctccccggctccgacggtacccccgga
ccccccggcacctccatgatgctgccgttccgcttcgggagcagtggcggggacaagggt
ccggtggtggccgcgcaggaggcgcaggctcaggccatcctgcagcaagcccggctggcc
ctgcggggcccccctggacccatggggtacaccggccgtcccggacccatggggcagccc
ggcagcaccggcatgaagggggagtctggagactttggccctcagggtccccgaggtcct
cagggcctgactggacccccgggaaagcctggccggaggggccgaccgggagctgatggc
gcacggggaatgcccggtgatcccggcgttaagggcgaccgcggcttcgatggactgccg
gggctaccgggtgacaaaggccaccggggtgaaactggttcgcaggggatgccgggaccc
cccggtgaggatggcgagaggggtgacgacggagaggtgggaccccgaggactccccgga
gaagcgggacccagagggctgctcggccccaaaggccccccaggaatccccggccccccg
ggtgtgcgtggcatggacggtcccgtcggtcccaaggggaacctggggcctcaaggggag
cccggaccccctggtcagcaggggaccccaggaacgcagggtctcccaggaccacagggt
gccatgggacctcctggagagaagggtccccaagggaaaccgggtttgcccggcatgcct
ggctccgacggaccccctggccaccccgggaaggagggaccccctggcaccaagggcaac
cagggcccctcgggtccccagggacccatcggctacccaggcccacgcggtgtgaaggga
gtggacggcatccgggggctgaaaggacacaagggtgagaagggcgaggaaggcttccct
ggcttcaagggggacatgggcgtcaaaggagaccggggtgaagtcggcgtgccgggctcc
cggggtgaggacggacccgaaggtcccaaggggcggacgggacccaccggtgaccccggt
cccatcgggctggtcggagagaaggggaagctgggagtgccaggcctgcctggctacccg
ggccgtcagggtcccaagggatcgcaaggtttccccggattcccaggcagcaacggcgag
aagggcgcacggggtctgtctggcaaatcggggcccaggggcgagcgtggccccacgggt
cccaggggccagcgaggaccacgaggagccactggaaagtcaggggcgaagggcacgtct
ggcagcgacggcccccacggccccccgggtgaacggggtctgccaggaccgcagggtccc
aacggcttcccgggacccaaaggaccccccggcccccccggcaaggacgggctccccggg
caccccggccagcgaggagaagtcggcttccaaggcaagaccggcccccctggccccccc
ggggtggtgggaccccagggtgctgctggtgagtctggccccatgggggagagaggccac
ccgggcccccccggccccccaggagaacaagggttaccgggaccatccggcaaggagggc
accaagggagaccccggccccactggctcccctgggaaggacggtcctgccggcttacgg
ggtttccccggtgagcggggtctgcctggcaccccgggtggcccggggctgaagggcaac
gagggaccggcgggacccccaggacccgcagggtctcctggggagagaggtggtccggga
caaggtggtcccgttggccccccaggacgaccgggaccgcaaggaccaccaggccccgcc
ggagagaaaggagttcccggtgagaagggccccatgggtcctgctggccgcgatggcgtt
cagggtcctgtgggtttacctggcccagccggcccccccggcggtcctggggaggacggt
gacaagggtgaggtgggcgagccaggacaaaagggcagcaaaggcaataagggcgagcac
ggtcctcctggtccccctgggcccatcgggtcggtcgggcagcccggagcagccggtgcc
gacggggaaccgggtgccagaggtccccagggacacttcggggccaagggcgacgagggg
acgcggggcttcaatggcccccccggccccatcgggctccaggggttgccgggtccggct
ggtgagaagggtgaaacgggtgacgtgggccccatgggcccacctggccccccaggtccc
cgtggcccagctggaccctctggagctgatggaccccagggaccccccggaggcgttggg
aacctgggacctcctggtgagaagggggaccccggtgaatcgggagccccgggaatccaa
ggggagccaggagtcaagggcccgcgaggagagcgaggggagaaaggagaagccggagct
gccggtgctgcaggaccacctggagggaaagggccccccggcgatgatggacccaagggc
aaccccggtcccgttggctttccaggtgaccccggacccccaggtgaaatgggtcctagg
ggccaggatggtgccaagggcgagcgtggggaggacggagagcccggagagccgggctca
ccgggtccgacaggcgagaacggtcctcccggtcccctggggaagaggggcccagccggt
tcccccggccctgaagggcgtcagggtgagaagggcgcaaagggagaaccgggtgcagtg
ggtgctcctggcaagacgggtcccgtgggtccccagggccttgctggaaagcagggcccc
gatggcctcagaggtctgcctggctcagtgggagaacaaggcaaaccggggaccacaggc
caagctggacccccaggaccagtgggtcccccgggtctccccggcctcaaaggtgacacc
ggtgctaaaggagagaagggccaccctggtctcatcggcctgatcggacccccaggggag
cagggggagaagggagaccgaggtctccctggcccccagggctccacagggcagaaagga
gaaactgggatccctggtgctactggacccatcggccccgctggcccccctggacttccc
ggcccagctggtcccaaaggtgccaagggagccatgggccaagcaggacccaaaggtgaa
cgtggacccccaggaccccctggacacccgggcccccccggggaggtgatccagcccctg
ccgatccagctgcccaagaagagcaagcgctccatagacgccagcaagctggtggatgag
gaggagggcgaggatggagagagagcggccgccgaccaggcggctcgcgattacgccgac
ggcatggaggagatcttcggctccctcaactccctcaagcaggagatcgaggggctgcgg
cgcccgacgggcacccgggacaaccctgcccgcacctgccaggacctgcagctcagccac
ccaggcctgcctgacggtgagtactggattgaccccaaccagggctgcgctcgagactct
ttcaaggtttactgcaacttcacagcaggcggggagacctgcgtctttcccagcaaggat
gtacaggaggtgaagatgtcggcgtgggaagaggaggtgccccagcggtggttcagtcag
ttccaggagggcagcaggttctcctacatggactcggagagccagccccttggcgtggtg
cagctgaccttcctacggctcctcagcatctctgcccgccagaacttcaccttccactgc
caccgctcggtggcctggcacagcaccatctccagggaccaccagcatgccctccgcttc
ctggctgccaacgaggaggagatcagctatgacaccagcccctacatcaaagctgtgatg
gacggctgctcggcacgaaagggctccagccggacggtgctagaagtgagcacgccccgc
ctggagcagctcccgctgctggatgtacgcgtcatggacttcggcgagcccggccagagg
ttcgggttcgaggtgggcccagtctgtttcctcggctag
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integrated database retrieval system
