Buteo buteo (common buzzard): 142026194
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Entry
142026194 CDS
T11399
Symbol
DHX16
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 isoform X1
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
bbut Buteo buteo (common buzzard)
Pathway
bbut03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bbut00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
142026194 (DHX16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bbut03041
]
142026194 (DHX16)
Enzymes [BR:
bbut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
142026194 (DHX16)
Spliceosome [BR:
bbut03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
142026194 (DHX16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
WHD_HA2
DEAD
AAA_22
AAA_19
AAA_30
Cas3-like_C_2
nSTAND3
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
142026194
NCBI-ProteinID:
XP_074875154
LinkDB
All DBs
Position
32:complement(744478..760843)
Genome browser
AA seq
1053 aa
AA seq
DB search
MAAAAAAAALERWVSGELQALLGLSGRHVPAFLVALARRSRSVEELLERLRETEALRVEE
PRVRAFARELWDKVPREAPREPPGRAAERAARELQRRSQGYRLVDSDDEGAGPAPSSAPS
HGSTPGMADASHRRRRHLRRRRSESPEASSPSPPTPPAPEPPEEPEAEWEASERERLRDL
EERDAFAERLRRRDRDRTRTVLARPDAKAYEEAQKRLKVAEEDQKTMVPELRKKSRREYL
AKRERDKLEELEAEIADEEYLFGEEALTRAERRELEYKRRVRDLAREYKRAGEKEKLEKS
NRYYIPEETRGKKIPEREEATGGEEERMAPRDEQRRWEEERIGAASLRFGARDAARRQPS
KDYDFVLEEDEMIQFVSAVQMKGTEPDKEAPAPVPEAERRRQSAQEVRRSLPIFPYRDEL
VAAIAQHQILVIEGETGSGKTTQIPQYLHEEGYTRQGLKIGITQPRRVAAMSVAARVAVE
MGTKLGNEVGYSIRFEDCTSERTVLKYMTDGMLLREFLTEPDLGSYSVIMVDEAHERTLH
TDVLFGLIKDIARFRPQLKVLVASATLDTQRFSAFFDQAPVFRIPGRRFPVDIYYTKAPE
ADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEACVELLQERCRRLGSRLAELLVLPIY
ANLPSDMQARIFEPTPPGARKVVVATNIAETSVTIDGIVYVLDPGFCKQKSYSARTGMES
LVVTPCSRASANQRAGRAGRVAPGKCFRLYTAWAFQHELEETPVPEIQRADLGSLVLLLK
SLGINDLIHFDFLDPPPHETLVLALEQLYALGALNHLGELTTLGRRMAELPVEPMLAKMI
LASEQYGCTEEVLTVAAMLSVNNAIFYRPKDKVLHADSARLGFHVPGGDHLVLLNVYNQW
VASGHSLQWCYEHFVQARSLRRARDVREQLEGLMERVEVAPSSCAGDYGPVRKAITAGFF
YHTARLTRGGYRTVKHQQTVFIHPNSSLFEEQPRWVLYHELVFTTKEFMRQVIEIDSAWL
LEVAPHYYQAKELEDASARKMPKKVGKSRDELG
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggcggcggcggcggcgctggagcggtgggtatccggggagctacaggct
ctgctggggctgagcgggcggcacgtccccgccttcctggtggcgctggcgcggcggagc
cgtagcgtggaggagctgctggagcggctgcgggaaacggaggcgctgcgagtggaggag
ccgcgcgtgcgcgccttcgcgcgggagctgtgggacaaggtcccccgggaggcaccgcgg
gagcccccaggccgagcggccgagcgggcggcgcgggagctgcagcgccgcagccagggc
taccgattggtcgatagcgacgacgagggggcgggccccgcccccagctccgccccttcc
catggctccacccccggcatggccgacgcttcccaccgccgccgacgacacctccgacga
cgacgctccgagtcgcccgaggcctccagcccttcgccgccgacgcccccggctccggaa
ccccctgaagagccggaagcggaatgggaagcatcggagcgggaacggctgcgggacctg
gaagaacgcgacgccttcgccgagcgtctgcgccgccgcgaccgtgaccgcacgcgcacc
gtcctcgcccgccccgatgccaaggcctatgaagaagcccagaaacgcctcaaagtcgct
gaagaagatcaaaaaaccatggttccagagctacggaaaaagtcccgccgggaataccta
gctaaacgggagcgagataaattagaagaactggaagcggagatcgccgatgaggaatat
cttttcggggaagaggcgctgacgagggcggagcggcgtgagctggagtacaaacggcgc
gtgcgggatctggcccgcgagtacaaacgggctggggagaaggagaaactggagaaaagt
aaccggtattacatccccgaggaaacacggggcaagaagatcccagaacgtgaggaagca
acgggaggggaggaagagcggatggccccccgggacgagcagcggcgatgggaagaggag
cgaataggggcggcttccctgaggtttggggcgcgcgatgccgcccgccgtcagccctcc
aaagattacgacttcgtgctggaggaagatgagatgatccagttcgtcagcgccgtgcag
atgaaaggcactgagcctgataaggaggcgccggcgccggtgccagaggcggagcggcgg
cggcagtcggcgcaggaggttcgccgtagccttcccatcttcccttaccgcgacgagctg
gtggccgccatcgctcagcaccaaatcctggtcatcgagggggagaccggttccggcaag
accacccagatcccccagtacctgcacgaggagggctacacgcgccaggggctgaagatc
ggcatcacgcagccgcggcgcgtggccgccatgagcgtggccgcccgcgtggccgtcgag
atgggcaccaagctgggcaacgaggtggggtacagcatccgcttcgaggactgcacgtcg
gagcggacggtgctgaagtacatgacggacgggatgctgctgcgggagttcctgaccgag
cccgacctcggctcctacagcgtgatcatggtggacgaggcccacgagcgcaccctgcac
accgacgtcctcttcgggctgatcaaggacatcgcccggttccgtccccagctgaaggtg
ctggtggcctcggccaccctcgacacccagcgcttctccgccttcttcgaccaggccccc
gtcttccgcatccccgggcgccgcttccccgtcgacatctactacaccaaggcgcccgag
gccgactacctggaggcgtgcgtggtgtcggtgctgcagatccacgtcacccagccccct
ggggacatcctcgtcttcctcaccggccaggaggagatcgaggcgtgcgtggagctgctg
caggagcgctgccgtcgcctgggctcccgcctggccgagcttttggtgctgccgatctac
gccaacctcccctccgacatgcaagcccgtatttttgagcccaccccccccggcgcccgt
aaggtagtggtggccaccaacatcgcggagacgtcggtgaccatcgacgggatcgtctac
gtgctggaccccgggttctgcaagcagaagagctacagcgcccgcaccggcatggagtcc
ctcgtggtcaccccctgctcccgggcctcggcaaaccagcgggcaggccgggcgggacgg
gtggctcccgggaagtgcttccgcctctacacagcttgggctttccagcatgagctggag
gagacgccggtgcccgagatccaacgtgccgacctgggctccctcgtcctgctcctcaag
agcctcggcatcaacgacctcatccacttcgacttcctggacccgccaccccacgagacg
ctggtgctggcgctggagcagctctacgccctgggtgccctcaaccacctgggagagctc
accacgctgggccggcgcatggcggagctgccggtggagcccatgttggccaagatgatc
ctggcctccgagcagtacggctgcacggaggaggtgctgacggtggcggccatgctttcg
gtcaacaacgccatcttctaccgccccaaggacaaggtccttcacgccgacagcgcccgc
ctgggcttccacgtccccgggggggaccacctcgtcctgctcaacgtctacaaccagtgg
gtggccagcggacactccctgcagtggtgctacgagcactttgtccaggcgcgctccctg
cgccgggcgcgggacgtgcgggagcagctggaggggctgatggagcgcgtcgaggttgcc
ccttcctcctgcgccggcgactacggacccgtccgcaaggccatcaccgccggcttcttc
taccacacggcgcggctgacgcggggcggttaccgcacggtgaagcaccagcagacggtt
ttcatccaccccaacagctccctcttcgaggagcagccccgctgggtgctctaccacgag
ctcgtcttcaccaccaaggagttcatgcggcaggtgatcgagatcgacagcgcgtggctg
ctggaggtggccccccattactaccaggccaaggagctggaggacgccagcgcccgcaag
atgcccaagaaggtgggcaagagccgggacgagctgggctga
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