Buteo buteo (common buzzard): 142027112
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Entry
142027112 CDS
T11399
Symbol
CHD1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
bbut Buteo buteo (common buzzard)
Brite
KEGG Orthology (KO) [BR:
bbut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbut03021
]
142027112 (CHD1)
03036 Chromosome and associated proteins [BR:
bbut03036
]
142027112 (CHD1)
Transcription machinery [BR:
bbut03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
142027112 (CHD1)
Chromosome and associated proteins [BR:
bbut03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
142027112 (CHD1)
SLIK complex
142027112 (CHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
Motif
Other DBs
NCBI-GeneID:
142027112
NCBI-ProteinID:
XP_074876878
LinkDB
All DBs
Position
Z:complement(58611519..58668185)
Genome browser
AA seq
1809 aa
AA seq
DB search
MNGHSDEDSIRNSSGESSRSDDDSGSASGSGSGSSSGSSSDGSSSQSGSSDSDSGSESGT
QSESESDTSREKKQIQAKPPKVDGSEFWKSSPSILAVQRSAVLKKQQQQQKAASSDSGSE
EDSSSSEDSADDSSSETKKKKHKDEDWQMSGSGSVSGTGSDSESEEDREKSTCEESESDY
EPKNKVKSRKPPSRIKPKSGKKSAGLKKRQLDSSDDDEEEEEDDDDYDKRGSRRQATVNI
SYKEAEETKTDSDDLLEVCGEDVPQTEEDEFETIEKFMDSRVGRKGATGAATTIYAVEAD
GDPNAGFEKSKEAGEIQYLIKWKGWSHIHNTWETEETLKQQNVKGMKKLDNYKKKDQETK
RWLKNASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSE
CSWEDGALIAKKFQARIDEYFSRNQSKTTPFKDCKVLKQRPRFVALKKQPSYIGGHESLE
LRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLS
TLTSWQREIQTWAPQMNAVVYLGDITSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDK
SFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFI
MPEKFSSWEDFEEEHGKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSA
LQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDDNEFYNKQEAL
QHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKG
ELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHR
IGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSTPSSSTPF
NKEELSAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETRENEPGPLTVGDELLSQFK
VANFSNMDEDDIELEPERNSRNWEEIIPEVQRRRIEEEERQKELEEIYMLPRMRNCAKQI
SFNGSEGRRSRSRRYSGSDSDSISERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKK
FGGPLERLDAVARDAELVDKSETDLRRLGELVHNGCIKALKDNSSGQERAGGRLGKVKGP
TFRISGVQVNAKLVISHEEELAPLHKSIPSDPEERKRYVIPCHTKAAHFDIDWGKEDDSN
LLIGIYEYGYGSWEMIKMDPDLSLTQKILPDDPDKKPQAKQLQTRADYLIKLLNKDLARK
EAQRLAGAGNSKRRKTRTKKNKVIKAAKIKEEIKSDSSPQPSEKSDEDDDEDSKDEIVSM
KQPHKKIKAENEEKSEPDTGIKKEPEEKREIKEKENKRDLKREKKEKEDKKELKEKDTKE
KRENKVKESTQKEKEVKEEKINEIKSENKEKTKKIPLLDTPVHITATSEPVPISEESEEL
DQKTFSVCKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKEYTNPE
QIKQWRKNLWIFVSKFTEFDARKLHKLYKHAIKKRQESQQHNDQNISSNVNTHVIRNPDV
ERLKENTNHDDSSRDSYSSDRHLSQYHDHHKDRHQGDTYKKSDSRKRPYSAFSNGKDHRD
WDHYKQDSRYYSDSKHRKLDDYRSRDHRSNLEASLKDSRAHSDHRSHSDHRVHSDHRSTS
EYSHHKSSRDYRYHSDWQMDHRASGSGPRSPLDQRSPYGSRSPLGHRSPFEHSSDHKSTP
EHTWSSRKT
NT seq
5430 nt
NT seq
+upstream
nt +downstream
nt
atgaatgggcacagtgatgaagacagcataagaaacagtagtggagagtcaagccgatca
gatgacgattctgggtcagcatcaggttctggatctggttcaagctctggaagcagtagt
gatggaagcagcagccagtcaggcagcagtgactctgactctggttcagagtcaggcact
cagtcagaatcagagtctgacacatctagagagaagaaacaaattcaagctaagccacca
aaagttgatgggtctgagttttggaagtctagtccaagtatacttgctgtgcaaagatca
gcagtgctcaagaagcaacagcaacaacaaaaggcagcctcatcagacagtggctcagaa
gaggactcatcaagtagtgaagattctgcagatgactcatctagtgaaaccaagaagaaa
aaacataaagatgaagactggcaaatgtcgggatcagggtcagtatcaggaactggttcc
gattctgaatcggaggaagatagggagaaaagcacttgtgaagagagtgaatctgactat
gagccaaaaaacaaggtcaaaagccggaaacctccaagcagaattaagccaaaaagtggg
aaaaagagtgcaggactgaaaaagaggcaacttgattcatcagatgatgatgaagaggaa
gaggaggatgatgatgattatgataagagaggatctcgtcgccaggcaacagtcaacatt
agttacaaagaagctgaagaaaccaagacagattctgatgatttgctggaagtttgtgga
gaagatgtcccacaaactgaagaagatgaatttgaaaccatagagaagttcatggatagt
cgagttggccgaaaaggagccacaggtgctgcaaccaccatctatgcagttgaggcagat
ggtgacccaaatgctgggtttgaaaagtcaaaggaggcaggagaaatacagtatcttatt
aaatggaaaggttggtcacacatccataacacgtgggaaactgaggaaacactgaagcaa
caaaatgttaaaggaatgaagaaactggacaactataagaagaaggatcaggaaacaaaa
cgatggctgaaaaatgcttctccagaagatgtggaatattacaactgccagcaggagctt
acagatgatctacataaacaatatcagatagtggaaagaataattgctcattcaaatcag
aaatcagcagctggttatccagactattattgtaaatggcagggtctgccttattcagaa
tgtagctgggaagatggtgctctcattgccaagaagtttcaggcacgcattgatgagtac
tttagcagaaatcaatccaagaccactccatttaaggactgcaaggttctgaaacagagg
ccaaggtttgttgcactaaagaagcaaccatcttacattggaggacatgaaagtttagaa
ttaagagattatcagttaaatgggttgaattggcttgctcactcatggtgcaaagggaat
agctgtattctggcagatgaaatgggtctgggtaaaacaatacaaacaatttcttttctg
aactacctgtttcatgaacatcaattgtatgggcctttcttgctggttgtgccactttct
accttgacatcttggcaaagagagattcaaacttgggctcctcagatgaatgctgtagtt
tacttgggagatataactagcagaaatatgataagaactcatgaatggatgcatccacag
accaaacgattaaaatttaacatacttctaacaacatacgaaattttgctgaaggataag
tcgttccttggtggtctgaattgggcattcataggagttgatgaagctcatcgtttaaaa
aatgacgactctcttctgtacaagactttaatagactttaagtctaaccatcgtcttctt
attactggaacccctctgcaaaactccctcaaagagctttggtctttgttgcacttcatc
atgccagaaaagttttcttcctgggaggattttgaagaggaacatggcaaagggagagag
tatggttatgcaagtcttcacaaagaacttgaaccatttctgctgagaagagttaaaaaa
gatgtagaaaagtctttacctgctaaagttgaacaaattctgaggatggaaatgagtgca
ttgcagaagcagtattacaagtggattttaaccaggaattacaaagccctcagtaaaggt
tcaaaaggcagtacctcaggctttttgaacatcatgatggaactcaagaagtgttgtaac
cattgctacctcattaaaccaccagacgacaatgaattctataataagcaggaggcctta
cagcatttaatacgtagcagtgggaaactaatccttcttgacaagctactgattcgtctg
cgagaacgtggcaacagagttctgattttctcacagatggtgagaatgctggacatccta
gcagaatatctgaagtatcgtcagtttccctttcagagacttgatggatcaataaaaggg
gaattgaggaaacaagcactggatcattttaatgcagaaggatcagaggacttctgcttt
ttactgtctaccagagctggaggattaggtatcaacttggcatctgctgacactgtagtt
atatttgattctgactggaatccacagaatgatctgcaagcacaggctagagcgcatagg
attggacagaagaaacaggttaatatctatcggctagtcacaaaaggatcagtagaagaa
gatattcttgaaagagccaagaaaaagatggtgttagatcatttggtaattcagagaatg
gacactacagggaaaaccgtactacatacaggctctactccttcaagctcaacacctttt
aataaggaggagttatcagcaattttgaagtttggtgctgaggaactttttaaagaacct
gaaggggaagaacaggagccccaggaaatggatatagatgaaatcttgaagagggctgaa
actcgggaaaatgagccaggtccactaactgtgggagatgagttgctttcacagttcaag
gtggccaacttttccaatatggatgaagatgatattgaattggaaccagaaagaaattca
agaaattgggaagaaatcattccagaagtccagcggcgaagaatagaagaggaggaaaga
caaaaagaacttgaagaaatatacatgcttccaaggatgagaaactgtgcaaaacagatc
agctttaatggaagtgaagggagacgcagtaggagcagaagatactctggatcagatagt
gactccatctcagaaagaaaacggcctaaaaaacgtggaagaccacgaactattcctcga
gaaaatattaaaggatttagtgatgcagagatcaggcggtttatcaagagttacaagaaa
tttggtggccctcttgaaaggttagatgctgtagctagagatgctgagctagttgataaa
tcagagacagatcttagacgtttgggagagcttgtacataatggatgcattaaagcttta
aaggacaattcatctggacaagaaagagcaggaggtagacttgggaaagttaaaggccca
acattccgaatctcaggagtgcaggtgaatgcaaagctagtcatctctcatgaagaagag
ttggcaccattgcacaaatccattccttcagatccagaagaaagaaaaagatatgtcatc
ccatgccacaccaaggctgctcattttgatatagattggggtaaggaagatgactccaat
ttgttaataggcatctatgaatatggttatggcagctgggaaatgataaaaatggatcct
gatctcagtttgacacagaagattttgcctgatgatccagataagaaaccccaggcaaag
cagttacagacccgtgcagactacctcattaaattactgaataaagaccttgcaaggaag
gaagcacaaaggcttgctggtgcaggcaattcaaagaggaggaaaacaagaactaagaag
aataaggtgataaaggctgcaaaaataaaagaagaaataaaaagtgattcttcaccacaa
ccctcagaaaaatctgatgaagatgatgatgaggatagcaaggatgagattgtttcaatg
aaacagccacataaaaaaattaaagcagaaaatgaagaaaagtctgagccagatactggt
ataaagaaggaacctgaagaaaaaagagagataaaagaaaaggaaaataagagggatttg
aaaagagagaaaaaagaaaaagaggataagaaagaattaaaagaaaaagatactaaagaa
aagagagaaaacaaagtgaaagaatccacacagaaagaaaaagaagtaaaggaagagaag
ataaatgaaatcaaatctgagaataaagaaaaaactaaaaaaattccattgctggatacc
ccagttcatattactgcaactagtgaaccagttcctatatcagaagaatctgaagaactg
gatcagaaaacttttagtgtgtgcaaagaaagaatgaggcctgtcaaagcagcattaaaa
cagctggatcgaccagagaagggcctttctgaaagagagcagctggaacatactagacaa
tgtctaatcaaaattggggatcacattactgaatgtctaaaggagtacacaaatcctgaa
caaattaaacagtggagaaaaaatttgtggatttttgtctctaagtttacagaatttgat
gccagaaaactgcacaaactgtataaacatgcaattaaaaaacgccaagagtctcagcaa
cacaatgaccagaatattagcagcaatgtgaatacacatgtaattagaaatccagatgtg
gaaagactgaaggagaatacaaaccatgatgacagtagcagggacagttactcttctgat
aggcatttgtcacaataccacgatcatcataaagacaggcaccagggagatacttacaag
aaaagtgactctaggaaaaggccctattcagccttcagcaatggaaaagatcacagagac
tgggatcactacaaacaagacagcagatactacagtgatagtaaacatagaaagttagat
gactacaggagcagagaccacaggtcaaacctggaagcaagtttaaaagacagccgggct
cattcagatcaccgttcccattcagaccacagggtacattcagatcaccgctccacttca
gagtacagccatcataaatcttctagagattataggtaccactcagactggcaaatggac
cacagagcttcgggtagtggcccaaggtcaccattagatcagaggtctccttatggttca
agatctcccctaggacacagatctccatttgagcactcatcagatcacaaaagtacacct
gaacatacatggagtagccggaaaacataa
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integrated database retrieval system
