Buteo buteo (common buzzard): 142030327
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Entry
142030327 CDS
T11399
Symbol
PDCD11
Name
(RefSeq) protein RRP5 homolog isoform X1
KO
K14792
rRNA biogenesis protein RRP5
Organism
bbut Buteo buteo (common buzzard)
Brite
KEGG Orthology (KO) [BR:
bbut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bbut03009
]
142030327 (PDCD11)
Ribosome biogenesis [BR:
bbut03009
]
Eukaryotic type
90S particles
Other 90S particles
142030327 (PDCD11)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
142030327
NCBI-ProteinID:
XP_074882410
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Position
4:55671002..55700292
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AA seq
1838 aa
AA seq
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MASLEENFPRGGIQKKPTEGKTPNPKLERDNLFDVHHEEQSQKRKRSQSVQGKQKKFKAD
NIATAKDSVVNIEPLTIEALCEGMLLLGCIKEVSDYELVISLPSGLSGFVPVTQISDAYS
KLLSKEVAQGELLEDLNSLSDMYSPGMLVRCIVTSVEKSADGRRSIKLSIDPKKVNKGLN
ASALASGMLLSGFVSSVEDHGYLIDIGVSGTHAFLPRQKAQNYIKAVKRGPDLKIGQNLN
CIIVEVKNEGRVVRLSVDRSEVAASLATERQNWTLSNLLPGLVVKARVQKVVPLGMKLSF
LSSFTGIVDFMHMDPEKSMNYSPDQVVKACILSIHPTSKVVRLTLRQAFLCPGGSPNQLS
NDRMGAVVEESTVKAFYKQFGAVFELDDGTLAFARLKHLSKTRKSFKPGAFKTGCKHKCR
IIDYSLMDEMCIVSLKYQIIEARFLQYQDIHTGDVVQGKVFALKPIGMQVKVTDGIKGLV
PSMHLADVILKQPEKKYNIGDEVRCRVLECNPAGRKLILTLKKSLIQSKLPVLSNYEDAK
AGLITHGFVVCAREFGCIVKFYNDVKGLVPKNELSSEPISSPDKVFHEGQVVKVMVLKCE
PQQERLLLSFRLSNKPAPEDKKECTPKKKQEVKYQIGEMVDVKVLKKKDSGLEVSILEDE
GNVIASIPTVHLSDFVATCKLLWHCLQEGDVLPRVMCLSDKGDHIILSRKSAVISAVQEE
QIVRSFSEIQPGMLLTGYVRNVMPFGVFVEFPFGVTGLAPKVSMSDKFVTDTKDHFVVGQ
TVIAKVMSIDEEKQRVLLNLKVSECSSGDSAAESFALLNQYFKEMKEIRNLLRRRGEPST
TQGLCELVPGKELQLVVQDVKEDGSALFSGSCVTGLTVTATRYHLGDKNIVPGEKTKALV
LHVDALTSKVYVSLREELLKQRAKQRLTENSQHSAIVQHIAEDFAVVSLLDTGQLAAIPI
ASHFNDTFRFDSEKLKVGQTIIATLKVVKVNDHGVLLAVQDPAKKKVFVRVRNESETALE
EMLPAVKHSLSLGDTVTGTVKSVKPTHVTVAIDDKLTGSIHASRILDEVPIGSFPTYTLK
AGQKVTARVIGGRDVNTHRYLPITHPHFTRSIPELSIRPSEIEGKVTAMLNLKEDSALKK
LGLYNAGQTVTCFVKKYNILKNWLEVEVAPDIRGRVPHLLLSLNTKVLKHPEKSFKNGQA
ISATVTGTDVTETNLCLSLTGIQSLEQGTITVGMVTKVTPHVGLTIALPGGKTGKVSIFH
LNDTYTENPLGDFKVGKIVRCCILSNENGKIQLSLRQSRLNPKSNSKVEDVEITCIKDVK
KGQLVRGYVKSISPSGVFFGLSTSLLGRILFQNVSPYFVQKQSLYEKYLPEGKLLTAKVL
GVNGKEKHIELSLLPEDTGMPSVLPESLGLPRYDAEEEKREADDREKREELKLKTKRTRE
NSESEQEAKPKKRKVCPADENDSGIEIYYREEDDDDQEEEAVKKKSKIRKPDEAPRLQVS
MGFTWDEDMNAMDIPVLNQKEESSESEEEEDLQSKLKKQTKKEKELEKQKKEKELCKLEA
ALMDPSRQPQSADDFDRLVLSSPNSSILWLQYMAFHLQATEIEKARAVAERALKTICFRE
EQEKLNVWVALLNLENMYGTEETLMKVFERAVQYNEPLKVFQHLCDIYANSEKYKQAEEL
YHTMLKRFRQEKSVWLKYASFLLKQGQTEATHRLLERALKALPTKEHVDVISRFAQLEFR
FGDPEHAKALFESTLSSYPKRTDIWSIYMDIMIKHGSQKEVRDIFERVIHLSLAPKKMKF
FFKRYLDYEKKFGTAESVLAVKRAALEYVETKSSLADP
NT seq
5517 nt
NT seq
+upstream
nt +downstream
nt
atggcatccctggaagaaaactttcctcgagggggcatccagaaaaaacccacagaggga
aaaacacccaacccaaagttagagcgggacaacttgtttgatgttcaccatgaagaacaa
tcccagaaaagaaaaaggagccagagtgttcaaggaaagcagaaaaagttcaaggcagac
aacatagccactgctaaagacagtgttgtaaatattgaaccactcacaattgaggcgctc
tgtgaggggatgctgctccttggttgtataaaagaggtcagtgactacgagctagtcatc
agcttgcccagtggactttcaggatttgtgccggtcacacagatcagcgatgcctacagc
aaactgctgagcaaagaggtggcccaaggagaactcctggaggacttgaattcgctctcg
gacatgtattctccagggatgctggtcaggtgcattgtgaccagtgttgagaaaagtgct
gatggacgtcggagtatcaaattatcaattgaccccaagaaggtcaataagggtctgaac
gcttcagctctagcatcgggcatgctgctctctggttttgtgtctagtgtggaggaccat
ggctacctcattgatattggagtcagtgggactcatgctttcctgcctcgtcagaaagcc
caaaattacatcaaagcagtcaagagagggcctgacttgaaaataggccagaacctgaac
tgtatcattgtggaagtaaagaacgagggaagagtggtccgtttgtctgttgatcgatca
gaggttgctgcatcccttgcaacagagcgacagaactggacgctctccaatttattgcca
gggctggtggtgaaagctcgagtgcaaaaggtggtcccacttgggatgaaactgagcttt
ctgtcttcctttactggcattgtagatttcatgcacatggacccagagaaatccatgaac
tattctccagatcaagtggtgaaagcatgcatcctctctatccaccccacctccaaggtg
gtgcggcttactctacgacaggccttcctctgccctgggggatcgccaaaccagctctcc
aatgatcgcatgggggcagtggtggaggagtcaacagtgaaagctttctacaagcagttt
ggtgctgtctttgagcttgatgatggcactcttgcatttgcacggttgaaacatctttca
aaaaccagaaaatcctttaaacctggggcatttaagacaggatgcaaacataaatgtcgg
atcattgactacagcctgatggatgagatgtgtattgtatctctgaaatatcagattatt
gaagcacggtttctgcaataccaagatatccacacaggagatgtcgtgcagggcaaagtg
tttgccctgaaacccattgggatgcaggtgaaagtgactgatgggattaaagggctcgtg
ccgtccatgcatctcgctgatgtgatcctgaagcagcctgagaagaagtacaacatagga
gatgaagtcaggtgtcgggtgctagagtgcaatcctgcaggaaggaagctgatccttact
ctgaagaaaagtcttatccagtcaaagcttccagtcctctccaattatgaagatgcaaaa
gcaggtctgatcacacatggctttgtggtgtgtgcaagggagtttggctgcattgtgaag
ttctacaatgatgttaaaggtctggtacccaagaatgagctgagctcagaacccatatct
tctccagataaagtcttccatgaaggccaggttgttaaagtaatggtcttaaaatgtgag
ccccagcaggaaagactcttattgtccttcaggttatcaaacaagcctgccccggaggac
aaaaaggaatgtactccaaagaagaaacaggaagtgaaatatcaaataggagagatggtt
gatgtgaaagtcttgaagaagaaagatagtgggctagaggtttctatcttggaagatgaa
ggcaatgtgatagcctcaattcccacagtgcacctctctgacttcgttgctacctgcaag
ctcctgtggcattgtcttcaagagggagatgtcctgcccagagttatgtgcctaagtgat
aagggagaccatatcatcttaagcagaaagtctgcagtgatttctgctgtacaagaggag
caaattgtgagaagtttctctgaaatccagcctgggatgctgttgactggttatgtgagg
aatgtgatgccctttggagtgtttgtggagtttccttttggtgtgacaggactggcgccc
aaagtgagcatgagtgacaagtttgtgactgacaccaaggaccactttgtggtgggacag
actgtgattgcaaaggtgatgagcattgatgaggagaagcagcgtgtgctcctcaatctg
aaggtgtcagagtgcagctcaggtgattctgctgcagagagctttgccctgctgaaccaa
tatttcaaggagatgaaagaaatcaggaacttgttgagaagaagaggggagcccagcacg
acccaaggcctttgtgagttggtgcctgggaaggaactgcagctggtcgtgcaggatgtg
aaggaggatggctcagcactgttcagcggtagctgtgtcacaggcttgactgtaacagcc
actcgctaccatttgggagacaaaaatattgttcctggtgagaaaaccaaggcattggtt
ctccatgtggatgctctcacctccaaggtgtatgtttctcttcgggaagaactgttaaaa
caaagagccaagcaacggctcacagagaactcccagcactccgccattgtgcagcacata
gcagaagactttgccgttgtgtctttgttggatacaggccagctggcagctatccccata
gcgtcccacttcaatgacaccttccgctttgactcagaaaaactgaaggtgggacaaaca
atcattgcaaccttaaaagtagtgaaggtgaatgaccatggagtcttgttagcagtacaa
gacccagcaaagaagaaagtttttgtaagggtccgaaatgaatctgagacagcattagaa
gagatgcttcctgctgtgaaacactcgctttccctgggggatactgttactggtactgtt
aaatccgtcaaaccaacccatgtcacagttgctattgatgacaagctgacaggttcaatc
catgcatcccggattctggatgaagtgcccataggctcttttccaacgtatactctgaaa
gctggacagaaggtgactgcccgagtcattggaggcagagatgtgaatactcacaggtac
ctgcccatcacccatccacacttcacacggtccattccagagctcagcattcgaccaagt
gaaatagaagggaaggtcacagcaatgctgaaccttaaagaagacagtgccctcaagaaa
cttggactctacaatgctggacagacagtcacctgttttgtgaaaaagtataacatcctc
aaaaattggctggaggtagaagtcgcccctgacattcgaggaagagttccccatctgctg
ctgtctctgaacaccaaggtcttaaaacatccggaaaagagcttcaaaaatggccaggca
atatcagctacagtgactggaacagatgtcacagaaacaaacctctgcttgtcactcaca
ggaattcagtcactggagcagggcaccatcactgtaggcatggtaacaaaggtgactcca
cacgtgggtttgaccattgcgctgccaggtgggaagactggtaaagtcagcatctttcac
ctgaatgatacttacacggagaatcctctgggtgacttcaaagttggcaagattgtcagg
tgttgcatcctctccaatgagaacggcaaaatccagttatctctccggcaatcccggcta
aacccaaagagcaacagcaaagtggaggatgttgaaataacatgtattaaggatgttaaa
aaaggccagctagtgagaggctatgtcaaatcaatcagtccatcaggtgtattctttggc
ttgtccacttctcttctgggccgaatcctgttccagaatgtttccccttactttgtacag
aaacagtccttatatgaaaagtacctgcctgaaggaaagctgctcactgccaaggtgctt
ggtgtaaatgggaaagaaaaacatattgagctctctctcctgcccgaggacactgggatg
ccaagcgtcttgcctgaatccctaggcctgccacgatatgatgcagaggaagagaaaaga
gaggcagatgacagggaaaagagagaagagcttaagctgaagacaaaacgcacaagagaa
aactctgaaagtgagcaggaggcgaagccaaaaaaaagaaaggtctgcccagcagatgaa
aatgacagtggaattgagatatattaccgggaggaggatgatgatgaccaggaggaagag
gcagttaaaaagaaatctaagataaggaaacctgatgaagctcccaggctgcaggtttcc
atgggcttcacctgggatgaagacatgaatgcaatggatatacctgtgctgaatcagaag
gaagagagctcggagagcgaggaggaggaggatctgcagtcgaagctgaagaaacaaaca
aagaaggagaaggagctagagaagcagaagaaggagaaggagctctgcaaattagaggca
gctttgatggacccaagtcgacagccccagtcagcagatgactttgaccgcctggtgctg
agcagtcccaacagctccatcctctggctacagtacatggctttccacctccaggctacc
gagattgagaaggccagagctgtggcagagagagcgcttaaaacaatctgcttcagggaa
gaacaggagaagctgaatgtctgggtagctctgctgaacttggagaacatgtatggtact
gaggagacactgatgaaggtctttgagagagctgttcaatacaatgaacctctgaaagtc
ttccagcatctgtgtgacatctatgccaattctgagaagtacaagcaagcagaagaattg
taccacacaatgctgaagcgtttccgtcaggagaaatccgtgtggctgaaatacgcctcc
ttcctcctgaagcaaggccagactgaggctacacacaggcttttggagcgtgctctcaag
gctttgcccaccaaagaacatgtggatgtcatttcaaggtttgcacagctggagttccgt
tttggggacccagaacatgccaaagccctctttgagagcaccctcagcagctatcccaag
cggacagacatctggtccatctacatggacatcatgatcaaacatggcagccagaaggaa
gtgcgggacatctttgagagggtcatacacctgagcttggcaccgaagaagatgaagttc
ttctttaaacgctacctggattatgagaagaaatttggtacagcagaaagtgtccttgct
gtcaaaagagcagcacttgagtatgtggagaccaagagttcccttgctgatccctaa
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