Buteo buteo (common buzzard): 142032267
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Entry
142032267 CDS
T11399
Symbol
VPS18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
bbut Buteo buteo (common buzzard)
Pathway
bbut04140
Autophagy - animal
bbut04148
Efferocytosis
bbut05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
bbut00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
142032267 (VPS18)
04148 Efferocytosis
142032267 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
142032267 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bbut04131
]
142032267 (VPS18)
Membrane trafficking [BR:
bbut04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
142032267 (VPS18)
Hops complex
142032267 (VPS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_RING_C
Clathrin
zf-C3HC4_2
zf-RING_Vps41
zf-RING_16
zf-RING_5
zf-RING_11
Lact-deh-memb
zf-RING_UBOX
zf-ANAPC11
zf-RING_2
zf_RING_Vps8
Nup54_57_C
DUF5600
LETM1_C
STX17_N
zf-rbx1
DUF1664
KNOX2
Motif
Other DBs
NCBI-GeneID:
142032267
NCBI-ProteinID:
XP_074886830
LinkDB
All DBs
Position
6:complement(43103483..43121613)
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AA seq
974 aa
AA seq
DB search
MASILDEYEDSLYRSASVQQSRASVGIPHSGYVNARLEKETPIFNKQRIDFAPPEKINSL
VVSSNQLCMSLGKDTLLRIDLGKPDEPNQVELGRKDEAKVYKMFLDHTGSHLLIALNTGE
CLYLNRSVQKVRALSRWKGHLIESVGWNKFLGSETNTGPILVGTAQGQIYEAEISVSEGS
LFSTNPDQYFRQVYTLEEESGPAPVCCLEIERGIEGKFFIIATTRKRLFQFVGKVPEGTE
QQGFSSIFAMHADHLPSFREFPANFGFSEIAFYTPKLRSNPRSFAWMMGNGVLYGTLDYS
RPDSILSDERVWVYPSDIDITVNKPISIVLTQFHFLLLLPDRVKAVCTLNGQVVFQDLFL
EKFGLLTRMIKDPTVQQIWIHTEKVVFRYHVQRESRDVWKMYMNMNKFDLAKEYCKDRPE
CLDIVLAKEAEHCFQNKRYLDSAKCYALTQNYFEEIALKFIEAKQEEALMEFLIKKLSNL
KPSEKTQTTLLTTWLTELYLNWLGILEGDPSQRNLYLDIREKFRTFLSSPKNKDCLFNNR
ASIYELLASHGDTEHMVYFAVIMQDYERVVAHHCQHDEYDEALNVLSRHRDEKLFYKFSP
VLIQHIPKKVVDAWISMGSRLDARNLIPALVNYSQSASTQQINEAIRYMEFCVYQLEETQ
QAIHNYLLSLYALCRPDSLLSYLEQAGTNPNRIHYDLKYALRLCAEHGHHHACVHIYKVM
ELYEEAVDLALQVDVDLAKSCADLPEDDEELRKKLWLKIARHVVQEEKDVKKAMACLSSC
ALLKIEDVLPFFPDFVTIDHFKEAICNSLEDYNKHIEELKREMEEATQSAKRIREDIQEM
RNKYGSVEPQEKCAACDFPLLNRPFYLFLCGHMFHYDCLLQAVFPNLPAYKQAKLEDLQK
KLAATSQPSKSHHRPKDADTISLGKGQQSREQIKADIDDIVAAECVYCGELMIRSIDKPF
IDPQKYEEEMQSWL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcctccattctggacgagtacgaagattccctgtaccgctccgcctccgtgcagcag
agccgcgccagcgtgggcatcccgcactccggatatgtgaatgcacgactggagaaggaa
acaccaatatttaacaagcaaaggattgattttgctcctccagagaaaattaacagctta
gtggtctcctctaaccagctctgtatgagccttggcaaagacacccttctcaggattgat
cttgggaagccagatgaacctaatcaggtagagctgggacgcaaagatgaagccaaagtc
tacaagatgtttttggaccacacaggctctcatctcctgattgctctgaacaccggtgaa
tgcctttacctgaacagaagtgttcagaaagtgcgagcactctcccgctggaaaggccac
ttgattgaaagcgtgggctggaacaaatttcttggttcagagaccaacactgggcctatc
ttggtggggacagcccaggggcagatctatgaggctgaaatctctgtcagcgagggaagc
cttttcagcactaaccctgaccagtacttccgacaggtctacactctggaggaggaatcg
ggacctgccccggtctgctgcttggagattgaacgtggaatagaagggaaattttttatt
atagccactactcggaagagactcttccagtttgttggtaaagtgcctgaagggacagag
cagcaaggcttcagctccatatttgctatgcatgctgaccatttgcccagcttccgggag
tttccagccaactttggtttcagtgagatagctttttacaccccaaaactgcgctccaac
ccacgctcctttgcctggatgatgggaaatggtgttttatatggtacgttggattatagc
cgtcctgattcaattttgagtgatgaacgggtctgggtttatccttctgatattgacata
actgtgaacaagccaatatccattgtacttacccagttccacttcttgttgctgctgcct
gatcgggtgaaggctgtatgcactctgaatgggcaggttgtttttcaagatctgttcctg
gagaagtttggcttactgacacgcatgatcaaagatcccacagtccagcagatatggatc
cacactgagaaagtagtgttccgctaccatgtccagcgagaatctagagatgtgtggaag
atgtatatgaatatgaacaaatttgatttagccaaagagtattgtaaagaccgtccagag
tgcctggatattgtgctggcaaaagaggcagagcactgcttccaaaacaagaggtatcta
gacagtgccaaatgttatgcgctgacccagaactactttgaggaaattgcccttaagttc
attgaagccaagcaagaagaggccctgatggagtttctgattaagaagctaagtaaccta
aagccttctgagaagacacagaccactctgctgaccacatggttaacggagctgtacctg
aactggctaggtatattggaaggagatccctcacagcgaaatctctatttggatatccgc
gagaagtttcgcactttcctgagcagtcctaaaaacaaagactgtctatttaataaccgg
gcatctatttatgagctgttggccagccatggggacacagagcacatggtctactttgca
gttatcatgcaggactacgagcgtgtagtagctcaccactgccagcatgatgagtatgat
gaagctctaaatgtgctgtccaggcacagagatgagaagctgttctacaagttctctcca
gtcctcatccagcatattcccaagaaggtagttgatgcttggatttctatgggttctaga
ctggatgctaggaacctcattccagcccttgttaactatagccagagtgccagcacccag
cagatcaatgaagccattagatatatggagttctgtgtctatcagttggaggaaacccag
caagccattcacaactacctgttgtctctttatgctttgtgtcggcccgactcattgcta
tcatacctggagcaagcaggaaccaacccaaacaggatccactatgacctgaagtatgca
ttgcgcctgtgtgcagagcatgggcaccaccatgcatgtgtccatatttacaaagtgatg
gaattatatgaggaggctgtggatcttgccttacaggtggatgttgatcttgccaagtcc
tgtgcagatctccctgaagatgatgaggaactccggaagaagctctggttgaagattgct
cgccatgttgttcaggaagagaaggatgtcaagaaagcaatggcctgcctctccagctgt
gccctactgaagattgaagatgtcctgccattctttccagactttgtcactattgaccat
ttcaaggaggcaatctgtaactccctggaggactacaacaagcacattgaggagctgaaa
agggagatggaggaagccacacagagtgccaagagaatccgagaggacattcaggaaatg
agaaataagtatggctctgtggagcctcaggaaaaatgtgctgcttgtgactttccactt
ctaaaccgccctttttaccttttcctgtgtggtcacatgtttcattatgactgtctcctc
caagctgttttcccaaaccttcctgcctataagcaggcaaaactcgaagatcttcagaag
aagctggcagctaccagtcagccttccaagagccaccatcgtcccaaagacgcagatacc
attagcttggggaaagggcagcagagccgggaacagatcaaagctgacattgatgatatt
gtggcagccgaatgtgtgtactgtggtgagctgatgatccggtctattgacaagcctttt
attgatccccaaaagtatgaagaggagatgcaaagctggctgtag
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