Buteo buteo (common buzzard): 142033058
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Entry
142033058 CDS
T11399
Symbol
PRPF8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
bbut Buteo buteo (common buzzard)
Pathway
bbut03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bbut00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
142033058 (PRPF8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bbut03041
]
142033058 (PRPF8)
Spliceosome [BR:
bbut03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
142033058 (PRPF8)
Complex C
U5 SnRNP specific factors
142033058 (PRPF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
142033058
NCBI-ProteinID:
XP_074888748
LinkDB
All DBs
Position
7:complement(41364682..41384940)
Genome browser
AA seq
2335 aa
AA seq
DB search
MAAVFPYRGGCAPVPSPLAPLPDYMSEEKLQEKARKWQQLQAKRYAEKRKFGFVDAQKED
MPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPVLY
HITGAISFVNEIPWVIEPVYIAQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYAD
NILDVEPLEAIQLELDPEEDAPVLDWFYDHQPLKDNRKYVNGSTYQRWQFTLPMMSTLYR
LANQLLTDLVDDNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDIN
KIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPIS
HRHSVKSQEPLPDDDEEFELPEFVEPFLKDTPLYTDNTANGIALLWAPRPFNLRSGRTRR
ALDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATK
FFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRF
GNAFHLCREVLRLTKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMR
QIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLARQF
EGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCW
KANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLT
RLYLKAEQERQHNYLKDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPPLSYKHDTKLLI
LALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMD
LYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQGIN
NLQDVWETSEGECNVMLESRFEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYK
DMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIATE
VAHPIRLFCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARM
RLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRILPKC
RTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIV
NKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPK
ELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFI
DSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRT
DFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEG
LFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGI
FMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSY
KMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYA
RAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKANPAL
YVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTT
KPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQ
IIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLY
DDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVE
VQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLT
ATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKET
GYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLP
GQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKVMADNPSWDGEKTIIITCSFTP
GSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQGSWN
YNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGEVYSADREDLYA
NT seq
7008 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgtcttcccgtaccgcggcggctgcgccccggtgcccagcccgctggcgccg
ctgcccgactacatgtctgaggagaagctgcaggagaaagcccgcaagtggcagcagctg
caggccaagcgctatgcggagaagagaaaattcggcttcgtggacgcgcagaaggaggac
atgccccccgagcacgtccggaagatcatccgcgaccacggcgacatgaccaacaggaaa
ttccgtcacgacaagcgcgtatacctgggtgctctgaagtacatgcctcatgctgttctg
aagctcttggagaacatgcccatgccctgggagcaaatcagagatgttccagtcttgtac
catatcacaggcgccatctcttttgtgaatgagattccctgggtcatagagccagtgtac
attgctcagtgggggtcgatgtggattatgatgaggcgagagaagagggataggcgtcac
ttcaagaggatgagattccccccgtttgatgatgaagaacctcccctggattatgctgat
aacatcctggatgtggagcccctggaagcgattcagcttgagctggacccagaggaggat
gctcctgtgctggactggttctatgaccaccagccgctgaaagacaataggaagtatgta
aacggttcaacgtaccagcgttggcagttcactctcccgatgatgtccacgctgtaccgg
ctggctaatcagctgctcactgaccttgtggatgataactatttctatttgtttgacctg
aaagcattctttacctccaaggcgctgaacatggctattcctggaggtcccaagttcgag
cctcttgttagagacatcaatcttcaggatgaagactggaatgaatttaatgacatcaac
aaaattatcatcaggcagccgatcaggacagagtacaaaatcgcttttccgtacctgtac
aataacctgccacaccatgtccacctgacctggtatcatactccaaacgtcgttttcatt
aaaacagaagatcccgatcttccagctttttacttcgatccactgatcaaccccatttca
cacagacattctgtcaagagtcaggaaccgttgcctgatgatgatgaagagtttgagttg
ccagagtttgtggaacctttcctgaaggatacccccctctacacagataacacagccaac
ggcattgccctgctgtgggccccgcggcccttcaacttgaggtctgggaggactcgcaga
gctcttgatatcccactggtcaagaactggtatcgtgagcactgcccagcaggccagcca
gtgaaagtgcgagtttcctatcagaaactactgaaatactatgttctgaatgcgctcaag
cacagacctcccaaggcccagaagaagaggtacctattccgctccttcaaggctacaaag
tttttccagtcgacaaagctggactgggtggaagtaggcctgcaggtgtgtcgccagggc
tacaatatgctgaacctgctgattcacagaaagaacctgaactaccttcacttggattac
aacttcaacttgaagcccgtgaagaccctcaccactaaggaaaggaaaaaatctcgtttt
ggtaatgctttccatctgtgtcgagaggttctgcggctgactaagttggtggtagacagc
catgtccaatacagacttggaaatgtggatgcatttcagttggcagatggcttgcagtac
atctttgcccatgtgggtcagctgacaggaatgtaccgatacaagtacaaactgatgagg
cagattcgtatgtgcaaggacctgaaacatcttatctactacaggtttaatacagggcct
gtgggcaaaggtcctggctgtggcttctgggctccaggctggagagtgtggctgttcttc
atgaggggcatcacgccgctgctggaacgctggctggggaatctgctggccaggcagttt
gaaggccgtcactcaaagggtgtagcaaagactgtcacaaagcagcgtgtggagtctcac
ttcgacctggagctgagggcagccgttatgcatgacattctggacatgatgccagaggga
atcaaacagaataaagccagaaccatcctgcagcatctgagcgaggcttggcggtgctgg
aaggccaatatcccctggaaggtgccaggactgccaactcctattgagaacatgatcttg
aggtatgtgaaggcaaaagctgactggtggacaaatacagctcactacaacagggagcga
atccgtcggggtgccactgtagacaaaaccgtctgtaagaagaatctgggccggctaacc
agactctacttaaaagctgagcaggagcggcagcataattacttgaaggatgggccttac
atcactgcggaggaggctgttgctgtgtacacaaccacagtgcactggctggaaagcagg
aggttctcacccattcccttccccccgctgtcctacaagcatgataccaagttgctcata
ttagctctggagaggctgaaggaagcttacagtgtgaaatcccgtctgaatcagtcgcag
agagaggagttgggcttgattgaacaggcttatgataatcctcatgaagctctgtccaga
atcaaacgacaccttttaactcagagagccttcaaggaggtgggtattgagttcatggat
ctctacagccacttagttcctgtttatgatgttgagcccttggagaaaatcacagatgct
tatctggatcagtacttgtggtatgaggctgataagcgaagactcttccctccatggatc
aaacctgctgacactgaacctcctccgctgctggtgtacaagtggtgccaaggcattaat
aatctgcaagatgtttgggaaacaagtgaaggtgaatgcaatgtcatgctggaatctcga
tttgagaagatgtatgagaagattgacctgacattgctcaacaggctgttgcgtcttatt
gttgatcacaacattgctgactacatgacagccaagaacaacgtagtgatcaactacaag
gacatgaatcacacaaactcctatgggattattcgtgggctgcagtttgcttccttcatt
gtccagtattacgggcttgtgatggacctgctggtgctgggtctgcaccgtgccagtgaa
atggctgggcctccccagatgccaaatgacttcctcagcttccaagacattgccactgag
gtggcccatcccattcgcctcttctgcagatacattgaccgtattcacatcttcttcagg
tttacagcagatgaggcaagagacttgattcagcggtacctgacagagcatccagatccc
aacaacgagaacattgtaggctacaacaacaagaagtgttggccccgggatgctcggatg
cgcctcatgaaacatgatgtgaaccttggtcgtgctgtgttctgggatatcaagaaccgt
ttgcctcgatcagtcaccacagtgcagtgggagaatagcttcgtatccgtttacagcaag
gataaccccaatttgctgtttaacatgtgcgggtttgagtgccgcatcttgcccaagtgc
cgcaccagctatgaggagttcacccacaaggatggtgtctggaacttgcagaatgaggtc
accaaggagcgcacagctcagtgcttcctgcgtgtggatgatgagtctatgcagagattc
cacaacagagtgaggcagatcctcatggcatctggctccacaactttcactaagattgtc
aacaagtggaatacagctctgattggcttgatgacatatttccgggaagctgttgtaaat
actcaggagctgcttgatttgctggtgaaatgtgagaataaaatccagactcgaatcaaa
attggtctgaattccaaaatgccaagccgttttccgccggtggtgttttacacccctaaa
gagctgggtgggctgggcatgctctccatgggccacgttctcatcccgcagtctgacctg
aggtggtccaagcagacagatgttggcatcactcacttccgctcaggaatgagtcacgag
gaggaccagcttatcccaaatttgtatcgttacatccagccatgggaaagtgaattcatt
gactctcagagggtatgggcagagtatgcccttaagcgacaagaggccatagcccagaac
aggcgtctgacactagaggatctggaggactcatgggacaggggaattcctcgtattaac
acccttttccagaaggaccggcataccctagcttatgataaaggatggagagttaggact
gacttcaaacagtatcaggtcctgaaacagaacccgttctggtggacacatcagcgccac
gatggcaaactctggaacctgaacaactaccgcacagatatgatccaggcacttggtgga
gtggaaggaatcctggagcacactctcttcaagggtacttacttccccacatgggagggt
ctcttctgggagaaggccagtggctttgaggagtccatgaagtggaagaagctgacaaat
gcccagagatcgggtttgaaccaaattccaaacagaagattcaccctgtggtggtctcct
accatcaacagagccaatgtatatgttgggtttcaggtgcagctggatttgacaggcatc
tttatgcatggcaagatccccacgctgaagatttctctcattcagattttccgagctcac
ttgtggcaaaagatccatgagagcattgtaatggatttgtgtcaggtgtttgatcaagag
ctggatgctctggagattgagacagtgcagaaggagaccatccatcccaggaagtcatac
aagatgaattcctcatgtgcagatatccttctctttgcttcttataagtggaatgtgtca
cgtccatcactgcttgcagattccaaagatgtgatggacagcaccaccacacagaagtac
tggatagatatccagctgcgctggggagattacgattcccatgatatcgagcgctatgca
agagccaagttcctggactacactacagacaacatgagtatatatccgtctcctactggt
gtgctcattgccattgatctggcctataacttgcacagtgcttatgggaactggttccct
gggagcaaacctctgatccagcaggctatggccaaaattatgaaagcaaatcctgcactg
tatgtgttgagggaacgaatccgcaaggggttgcagctgtactcatctgagcccacagaa
ccatacctttcctcccagaactatggagaactcttctccaaccagatcatctggtttgtg
gatgacacgaatgtgtacagagtgaccattcacaagacttttgaagggaatttgaccaca
aaacccatcaatggagccattttcatcttcaatcccagaactggacagctattcctgaag
atcatccatacgtctgtgtgggcgggacagaagcgtctaggacagctggccaagtggaag
actgctgaagaagtggctgccttgattcgatcacttcctgtggaggagcagcctaagcag
atcatagtgactcggaagggcatgttggacccacttgaggtgcacttgctggatttcccc
aatattgtgatcaaaggctcagagctgcagctgcccttccaggcctgtctgaaagtggaa
aagtttggtgatctcatcctgaaggctactgaaccccagatggttctctttaatctctat
gatgactggctgaaaaccatctcttcctacacggcattctctcgtctgattctgattctc
cgggcactacatgtgaataacgatcgagccaaagttattctgaaaccagacaagacaacc
ataacagagcctcaccacatctggccaaccctgacagatgaggagtggatcaaggtggag
gtgcagctgaaggatctcatccttgctgactatggcaagaagaacaatgtgaacgttgca
tccctgacacagtcagagatccgagacattatcctgggcatggagatctctgccccctct
cagcagagacagcagattgcagaaattgagaagcaaaccaaggagcagtcacaactgaca
gccacgcagacccgcacggttaacaaacacggggatgaaatcatcacctctacgaccagc
aactacgaaacccagaccttctcctccaagactgagtggcgagtcagagcgatttctgct
gccaacctccacctgcgaacgaaccacatttatgtttcatcagacgatataaaggaaacg
ggctatacgtacattcttcccaagaacgtgttgaagaagttcatctgcatatcagatctg
cgggcccagattgcgggttacctgtatggagtgagccctcccgataacccccaagtgaag
gagatccggtgcattgtgatggtgccccagtggggaactcaccagactgtgcatctccca
gggcagctgccgcagcatgaatatctcaaggaaatggaacctctggggtggattcacacc
caaccaaatgagtcccctcagctctcaccgcaggatgtcaccacccatgctaaggtcatg
gctgacaacccctcctgggatggggagaagactatcatcatcacctgcagttttacacca
ggctcctgcacgctgacagcctacaaactgacccccagcggctacgagtggggcaggcag
aacacggacaaagggaacaaccccaagggctacctgccatcccattacgagagggtgcag
atgctgctgtcggatcgcttcctcggcttcttcatggtcccagcgcaagggtcctggaac
tacaacttcatgggtgttcgccacgaccccaacatgaagtacgagctgcagctcgccaac
cccaaggagttttaccacgaggtccatcgcccttctcacttcctcaacttcgccctgctc
caggagggagaggtttactccgccgaccgggaggacctctacgcctag
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integrated database retrieval system
