Buteo buteo (common buzzard): 142034294
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Entry
142034294 CDS
T11399
Symbol
XRN2
Name
(RefSeq) 5'-3' exoribonuclease 2 isoform X1
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
bbut Buteo buteo (common buzzard)
Pathway
bbut03008
Ribosome biogenesis in eukaryotes
bbut03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbut00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
142034294 (XRN2)
09123 Folding, sorting and degradation
03018 RNA degradation
142034294 (XRN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbut03021
]
142034294 (XRN2)
03019 Messenger RNA biogenesis [BR:
bbut03019
]
142034294 (XRN2)
03009 Ribosome biogenesis [BR:
bbut03009
]
142034294 (XRN2)
03016 Transfer RNA biogenesis [BR:
bbut03016
]
142034294 (XRN2)
Transcription machinery [BR:
bbut03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
142034294 (XRN2)
Messenger RNA biogenesis [BR:
bbut03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
142034294 (XRN2)
Ribosome biogenesis [BR:
bbut03009
]
Eukaryotic type
Pre-60S particles
RNases
142034294 (XRN2)
Transfer RNA biogenesis [BR:
bbut03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
142034294 (XRN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRN_M
XRN_N
Motif
Other DBs
NCBI-GeneID:
142034294
NCBI-ProteinID:
XP_074891383
LinkDB
All DBs
Position
9:9419987..9473466
Genome browser
AA seq
950 aa
AA seq
DB search
MGVPAFFRWLSRKYPSIIVNCVEEKAKECNGVKAPIDTSKPNPNEVEFDNLYLDMNGIIH
PCTHPEDKPAPKNEDEMMVAIFEYIDRIFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR
ASKEGMEAAEEKQKIRREILAKGGILPPEEVKERFDSNCITPGTEFMDNLAKCLRYYIAD
RLNSDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG
LATHEPNFTIIREEFKPNKPKPCALCNQMGHEVKDCQGLPREKQGKHDQFADSLPIAEQE
FIFIRLCVLREYLERELTMASLPFTFDFERSVDDWVFMCFFVGNDFLPHLPSLEIREGAI
DRLVNIYKNVVHKTGGYLTESGFVNLQRVQMIMLAVGEVEDSIFKKRKDDDDNFKRRQKE
KRKRMKRDQPSFIPGGQFSPQALGNRSSPQAISNPRQAAFEMRMHDRQNSTTSSSPNTSL
NSDGSPSLAGGIKRKAEDSDSEPEPEDNIRLWETGWKQRYYKNKFDVDASDEKFRRKVVQ
SYVEGLCWVLRYYYQGCASWNWYYPFHYAPFASDFEGIADMPSDFEKGSKPFKPLEQLMG
VFPAASGNFLPPTWRKLMTDPESSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRA
ALEEVYPDLTPEESRRNSLGGDVLFVGKHHPLCDFIVEQYKTKNTEPVDIPPELCHGIQG
KLTLNENAVLPDQTVESPVPMLRDLAQNSAVSISFKDPQFDEDFVFKAIVLPGAKKPAPV
LKPGDWEKTNNDGRPWRPQLNFNRDRKPVHLDQSAFRTLGHTMPRERGMPGMYANAVPLG
TYGSPYTRPLLSGQQQIPKLLSNLRPQESWRGPTPLFQQAPQRTAGAAPLLAWNRMLQSQ
NQYQPSQYQGLGGPMSYPQRPEDRMDRGRQAYGPGRPYPLPPSSGRYSWN
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgggagtcccggccttcttccgctggctcagtcgcaagtatccctccatcatcgtcaac
tgcgtggaggagaaggctaaagagtgcaatggcgtcaaggctccaattgatacaagcaaa
cctaaccctaatgaggtggagtttgataacttatatttggatatgaatggtataattcac
ccttgtacgcatccagaagacaagccagcacccaaaaatgaagatgaaatgatggttgca
atttttgagtatattgacaggatcttcaacattgtaagaccaaggcgacttctttacatg
gctatagatggagtagctccacgtgcaaaaatgaatcaacagcggtcaagaagattcaga
gcatcaaaggaaggcatggaagctgctgaagagaagcaaaaaataagacgagaaattctg
gcaaaaggtggcattcttcctccagaagaagtgaaagagaggtttgacagcaactgtatt
accccaggaactgagtttatggacaatcttgctaaatgtctccgctattacattgctgac
cgtttgaacagtgacccagggtggaagaatttgacagttattttgtctgatgctagtgct
cctggtgaaggtgaacataaaatcatggattacattagaagacaaagagctcaaccaaac
cacgacccaaacactcatcattgtctgtgtggggctgacgctgatctgatcatgcttggg
ttagctacacatgaaccaaacttcactataattagggaagagttcaaaccaaataaaccc
aagccatgtgctctttgtaaccagatgggtcatgaggttaaggattgccaaggtttgccc
agagaaaaacaaggcaagcacgatcagtttgcagacagtcttcctattgctgaacaagaa
tttatcttcatccgattatgtgttttgcgagagtatttggaaagagaactcactatggcc
agtttgcctttcacttttgattttgaaagaagtgttgatgactgggtctttatgtgcttc
tttgtgggaaatgactttcttcctcatctgccatctttggagatcagggagggagcaatt
gatcgcttggttaacatatataaaaatgtggtgcacaaaactggggggtacctcacagaa
agtggttttgtcaacctacagcgggtccagatgataatgttagctgttggagaagttgaa
gatagtattttcaaaaagaggaaagatgatgatgataactttaaaagacggcagaaagaa
aaaagaaaaagaatgaagagggatcagccttcttttattcctggtggacagttctcccct
caagctctgggaaatcgatctagtcctcaggcaatcagtaaccctagacaagccgccttt
gagatgagaatgcatgacagacagaattctacaacttcatcatctccaaataccagcctc
aattctgatggcagcccatccctggcaggaggaattaagcgaaaagctgaagatagtgac
agtgaacctgagccagaggataatatcaggttatgggaaactggttggaaacagcgctac
tataagaacaaatttgatgttgatgcatctgatgagaaattccgtcgtaaagttgtacag
tcctatgtggaagggctttgctgggttctcagatattattatcagggctgtgcatcctgg
aactggtattacccttttcactatgctccgtttgcttctgactttgagggtattgcagac
atgccttcagattttgagaaaggctcaaaaccgtttaagcctcttgaacaacttatggga
gtatttccagctgcaagtggaaattttctgccgccaacatggaggaagctcatgacagat
ccggaatcaagcataattgacttctaccctgaagattttgctattgatttaaatgggaag
aaatacgcttggcaaggtgttgcgttattgccatttgttgatgagcgacgccttagagct
gccctggaagaagtctaccctgacctcactcctgaagaaagcagaagaaatagccttggt
ggtgatgttctctttgttggaaaacaccatccactttgtgactttattgtagaacagtac
aagaccaaaaatacagagccagtggatatacccccagagctgtgccatggaatccaggga
aagcttacactgaatgaaaatgctgttcttccagatcagacagtggagtctcctgttcca
atgctgcgtgatcttgcacaaaattctgcagtcagtatctctttcaaagatccgcaattt
gatgaagactttgttttcaaggctatagtgttacctggtgcaaagaaacctgctccagtt
ctgaagccaggagactgggaaaaaaccaacaatgatggcaggccttggagaccacagctt
aattttaacagagacagaaaaccagtccatttggaccagtcagcattcagaactttgggc
catacgatgccaagggaaagagggatgccaggaatgtatgccaatgcagtacctcttgga
acttacgggagtccatacaccaggccacttctgagtgggcagcagcagattcctaaattg
ttgtcaaatcttagaccccaggagtcttggcgaggtcctacgcccttgtttcaacaggca
ccgcaaagaactgctggggctgctcctcttcttgcctggaaccgcatgctgcaatcccaa
aaccagtaccagccaagtcagtaccaggggctgggcggaccaatgagttacccacagaga
cctgaagatcggatggacaggggaaggcaggcatatggccccgggaggccctacccgcta
ccaccttcctcaggaagatacagctggaattag
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