Buteo buteo (common buzzard): 142034759
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Entry
142034759 CDS
T11399
Symbol
CASC3
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
bbut Buteo buteo (common buzzard)
Pathway
bbut03013
Nucleocytoplasmic transport
bbut03015
mRNA surveillance pathway
bbut03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bbut00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
142034759 (CASC3)
09122 Translation
03013 Nucleocytoplasmic transport
142034759 (CASC3)
03015 mRNA surveillance pathway
142034759 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbut03019
]
142034759 (CASC3)
Messenger RNA biogenesis [BR:
bbut03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
142034759 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
142034759
NCBI-ProteinID:
XP_074892617
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Position
9:45403275..45416958
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AA seq
721 aa
AA seq
DB search
MADRRRQRASQDSEDDSDSAASDSADSAASAARSRSGSASGSGSGSPRPPHRPPRGAAGA
LSAGPRGRGAESAAGGAAKSAPESECESEDGIEGDAVLSDYESAEDSEAEEEDYSEEESA
KVELKQDSNDSCESAAKAEKGDEKPDSKGAVTGERQSGDGQESTEPVENKVGKKVPKHLD
DDEDRKNPAYIPRKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPK
TRQELIALYGYDIRSAHNPDDIKPRRMRKPRFGSPPQRDPNWSNERPNKPPRHQGADSTS
APPRTFTSRSSAGTGRMPPPRNYPRMGGYKETRPSYRASEASIQHLSRNGEQAKQDSNYR
AKRAEQTPPRDKSPEMEAAHVHGSPVKEEIALENQATAADAAQPPPDRPIEKKSYSRARR
TRIKAGDAGKLADEVPASEGLTPVPPKPVQAETSPPPAKNSNWESPVESNLDGLEQEMTQ
MNLTEQNWTPGQSQFIQPRELRGIPNHMHVGTGPPPQFNRMEEMAVQGGRVKRYSSQRQR
PPVPEPAPPMHISIMEGHYYDPLQFQGPIYTHSENPAPLPPQGMIVQPEMHLPHPGLHPH
QTPAPMANPGLYPPPVSMPPGQPPPQQLLAPTYFSPPGVMNFGNPGYPYPPGALPPPPPP
HLYSNTQAQSQVYGGVTYYNTVQQQVQPKPSPPRRTSQPVTIKPPPPEDSKGEKSKERSN
T
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccggcggcggcagcgcgcctcgcaggacagcgaggacgactcggactcggcc
gcctccgacagcgccgactcggccgccagcgccgctcgctcccgctcgggatccgcctcc
ggctccggttccggttctccccgcccgcctcaccgcccgccgaggggtgccgccggggcc
ctcagcgctgggccgcggggccgcggggccgagagcgctgccgggggggcggccaagagc
gcgcccgagtccgagtgtgaaagtgaggatggcattgaaggagatgctgtactctcagat
tacgaaagcgcagaagactcggaggcagaggaagaggattacagtgaggaagaaagtgcc
aaagtggaactgaagcaggatagtaatgattcctgtgagtcagcggcaaaagcagagaaa
ggggatgagaaacctgactccaaaggtgctgtaactggtgagaggcaaagcggggatggg
caggagagcactgaacctgttgagaataaagttggaaaaaaagttcccaagcacctggat
gatgatgaggatcggaagaacccagcttacatcccgcgcaaagggctcttctttgagcat
gacctccgagggcagacgcaggaggaagaggtcaggccgaagggtcgtcagcggaagcta
tggaaggacgagggccgctgggagcacgacaaattccgggaggacgagcaggcccccaag
accaggcaggagctgatagcgctttatggctatgacatcaggtcagctcacaaccccgat
gacatcaagccgaggaggatgcgcaaaccaagatttgggagtcctcctcagcgagaccca
aactggtccaacgagaggccaaataagcccccaaggcaccaaggtgcagacagcacttca
gctcccccgcgaaccttcaccagcaggagctctgcaggtacagggaggatgcccccaccc
agaaactacccaaggatggggggctacaaagagacccgtccaagctaccgagcttcagaa
gcaagcatccagcatctgtctcgaaacggtgagcaagcaaaacaggacagcaactataga
gcaaagcgtgcagagcaaactccaccaagagacaagtcaccagagatggaagcagcacat
gtccacggcagccctgtgaaggaggagattgctttggaaaatcaagccacggctgctgat
gctgcacagccaccaccagacagaccaattgaaaagaagtcttattcccgggcaagaagg
accagaatcaaggctggcgatgcggggaagctggcagatgaagtgcccgcttcagaaggg
ctgactcctgtgcctccaaaacctgtgcaagctgagacgtcccccccaccagccaagaac
agtaactgggagtcgccggtagaatccaacttggatggacttgagcaagagatgacccaa
atgaatctcactgagcagaactggactccggggcagtcgcagttcatacagccccgggag
ctgaggggtattcctaaccatatgcacgtgggaactgggccaccacctcagtttaacaga
atggaggaaatggcagtgcaggggggccgtgtgaaacgctactcatcgcagcggcagagg
ccgccggtgccggagcctgccccccccatgcacatcagcatcatggaagggcactactat
gacccactacaattccagggaccaatctacacccacagtgagaacccggccccgctgccg
ccccaagggatgattgtacagccagaaatgcacctccctcatccaggtttacatccccac
cagacgccagcccccatggcaaaccctgggctgtaccctccgccagtctccatgccccca
ggccagcccccgccacagcagctgctcgcaccgacttacttctcccctcctggagtcatg
aattttgggaatcctggctacccctaccccccaggagcactaccccctccgccccctcct
cacctctattccaacacgcaggcccagtcccaagtgtacggaggggtcacatactacaac
actgtccagcagcaagtgcagcccaagccttctccacctcgaaggacgtcccagcctgtg
actatcaagccaccgcctcctgaggacagcaaaggtgaaaaatcaaaggagaggagcaac
acgtag
DBGET
integrated database retrieval system