Buteo buteo (common buzzard): 142034835
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Entry
142034835 CDS
T11399
Symbol
DHX8
Name
(RefSeq) ATP-dependent RNA helicase DHX8 isoform X1
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
bbut Buteo buteo (common buzzard)
Pathway
bbut03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bbut00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
142034835 (DHX8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bbut03041
]
142034835 (DHX8)
Enzymes [BR:
bbut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
142034835 (DHX8)
Spliceosome [BR:
bbut03041
]
Complex C
Other components
Step II factors
142034835 (DHX8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
WHD_HA2
DEAD
AAA_22
GIPC1_GH2
AAA_19
PRP38_assoc
nSTAND3
Flavi_DEAD
T2SSE
AAA_16
nSTAND_NTPase5
PhoH
TsaE
Sigma54_activ_2
OB_RRP5_4th
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
142034835
NCBI-ProteinID:
XP_074892747
LinkDB
All DBs
Position
9:46570097..46592649
Genome browser
AA seq
1192 aa
AA seq
DB search
MADLVAAEELAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKNTTFDTFKAVLLK
NGAEFTDSLISNLLRLIQTMRPPPKPSTSKETVVKPKSEKEKLKELFPALCRPDNPNIRN
MLDEDDVKVAADALKELEALMPSADRQGKQRSSDHRVKKKRKSRSRSRDRKRRHRSRSRS
RSRTRDKNRGKSRYRSRSRSQSPSRDRKDREKYIEKSNERWRDKHIDRPPPEEPSIGDIY
NGKVTSIMQFGCFVQLEGLRKRWEGLVHISELRREGRVANVADVVSKGQRVKVKVLSFTG
SKTSLSMKDVDQDTGEDLNPNRRRNLVGETNEETSMRNPDRPSHLSLVNAPEVEDDSLER
KRLTRISDPEKWEIKQMIAANVLSKEEFPDFDEETGILPKVDDEEDEDLEIELVEEEPPF
LRGHTKQSMDMSPIKIVKNPDGSLSQAAMMQSALAKERRELKQAQREAEMDSIPMGLNTH
WVDPLPDVDGRQIAANMRGIGMMPNDIPEWKKHAFGGNKASYGKKTQLSIIEQRESLPIF
RLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAK
RVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAH
ERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILY
TKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELI
ILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSK
TGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLAST
VLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPM
LCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAV
YNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKATVRVQKAIC
SGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTI
DPRWLVEFAPAFFKVSDPTKLSKQKKQQRLEPLYNRYEEPNAWRISRAFRRR
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atggcggacctggtggccgcggaggagctggcgaagctcgagtatttgtcgctggtctct
aaggtctgcactgagctggacaaccacctgggcatcaacgacaaggacctggccgagttt
gtgataagtcttgctgagaaaaatactacgtttgacacgtttaaggcagttcttctaaag
aatggcgccgagttcactgattcgcttattagtaatttactacgtctcatacagacaatg
cgacctccaccaaaaccatctacgagcaaagagacagttgtcaaacccaaatcggagaag
gaaaagttgaaagaattgtttccagctctttgcaggccagacaatcccaacatcaggaac
atgctggatgaagatgacgtgaaggtggcagctgatgcacttaaagaacttgaagctctg
atgcctagtgcagacaggcaaggcaagcaaaggagcagtgaccaccgggtgaagaaaaag
aggaagagtcgaagtcgtagcagggacaggaagcgaaggcacagatctcgctctaggtct
cgttctaggactcgggataagaacaggggaaaatccagataccgatcaaggagcaggagt
cagagtcccagtagggaccgtaaggatcgagagaagtacatcgagaagagcaatgagaga
tggagagacaagcacatcgaccgtccgccacctgaggagccttccattggagacatttac
aatggcaaagtcaccagtataatgcaatttggatgctttgtgcagctggaaggactaagg
aagcgttgggagggcttagtccacatctcagagcttcgaagagaaggacgggttgccaat
gttgccgatgttgtgagcaaaggacaaagagtaaaagtcaaagtgttatcctttactgga
tccaaaaccagcctgagcatgaaggatgttgatcaagacactggggaagacttgaaccca
aaccggaggagaaacctggttggagaaaccaatgaagaaacctctatgagaaacccggac
agacccagtcacctgtctctggtgaatgccccagaggtggaggatgatagccttgaacgg
aaacgcctcacccgaatttcagacccagagaaatgggaaataaaacagatgattgcagct
aatgtgctttccaaggaagagtttcctgactttgatgaggagactggcattcttcctaaa
gttgatgatgaagaagatgaggaccttgagattgagctagttgaagaagagccaccgttc
cttcgaggtcatactaaacagagcatggatatgagtcctattaaaatagtaaagaatcca
gatggttccttgtcccaggctgcaatgatgcagagtgctttagctaaagaaagacgagaa
cttaaacaagcccagagagaagcagagatggattctatccctatgggactcaacacacac
tgggtggatcctctccctgatgtggatggaagacaaatagctgcaaacatgcgaggtatt
gggatgatgcccaatgacattccagagtggaagaaacatgcatttggtggcaacaaagct
tcttatggtaagaagacccagctttccattattgagcagagagagagtctcccaatcttc
agactgaaggagcagctgatacaggctgtgcatgacaaccagattctgattgttattgga
gagacaggatctgggaaaacaacacagattacccaatacctggctgaggcggggtatacg
tcaagaggaaagattggatgtactcagcctcgcagagtggctgcaatgtctgttgcgaag
agggtgtcagaggaatttggttgctgcttgggacaagaggttggctacaccattcgattt
gaagactgcactagccctgaaactgttatcaaatacatgacagatggtatgttactgagg
gagtgcttgatagatcctgatctgacccagtatgccattatcatgctggatgaagcccat
gagaggaccatacatacagatgtgctctttggactcctgaagaagacagtgcagaaacgg
caggatatgaagctgatagtgacatcagcaacactggatgctgtgaaattctctcagtat
ttctacgaagctccgatcttcacaattcctggcagaacatacccagtagaaattctgtac
acaaaagagccggagacagattatttggatgccagtctgattacagtaatgcagatccac
ttaacagagccaccaggtgacattttggtgtttctaactggtcaggaagagattgacact
gcctgtgaaatcctctatgagaggatgaaatctctaggacctgatgttccagagttaatt
atcctaccagtatattcggctttacccagtgaaatgcaaaccaggatcttcgacccagcc
ccaccaggaagcagaaaggttgtcatcgccactaacattgctgagacatctttgactatt
gatggaatatattatgtagttgatcctggctttgtgaagcagaaggtttataactccaag
actggaattgaccagctggttgttacaccaatttcacaagctcaagcaaagcagcgagca
ggaagggctgggagaacaggaccaggaaaatgctataggttgtatacagagcgtgcttat
cgagatgaaatgctaaccaccaatgtgcctgaaatccagagaacaaatttggccagtaca
gtactttccctgaaggctatgggcatcaatgatttgctctcctttgactttatggatgct
cctccaatggaaactctcataactgccatggagcagctgtacaccctgggagctctggat
gatgagggactgctcactcgacttgggcgcaggatggcagaattccccttggagcctatg
ttgtgtaagatgttgatcatgtctgtacatctgggatgcagtgaggaaatgttgacaata
gtctccatgctttctgtacagaatgtgttctacaggccaaaggataaacaagcacttgct
gaccaaaagaaagccaaattccatcagacagaaggtgaccacctcactctgctggctgtg
tacaattcctggaagaataataagttttcaaatccctggtgctatgaaaattttatccag
gcccggtccttacgcagggcacaggacatccgcaagcagatgttgggcattatggacagg
cacaagctggatgtggtatcctgtgggaaggcaacagttcgagtccagaaggccatctgt
agtggcttcttccgaaatgcagcaaagaaggatccccaggaaggttatcggacactcatt
gatcaacaagtagtctatatccacccatcgagtgctctcttcaacaggcagccagaatgg
gtggtatatcacgaactggtgctaaccaccaaggaatatatgcgtgaagtgacgactatt
gatcctcgctggctggtggagtttgcaccagctttcttcaaggtttctgatccaaccaag
ctcagcaaacagaaaaagcagcagcgactggaacccctgtacaatcgctatgaggagccc
aatgcttggaggatatcacgtgcattcagacggcgatga
DBGET
integrated database retrieval system
