Buteo buteo (common buzzard): 142035447
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Entry
142035447 CDS
T11399
Symbol
TNR
Name
(RefSeq) tenascin-R
KO
K06252
tenascin
Organism
bbut Buteo buteo (common buzzard)
Pathway
bbut04510
Focal adhesion
bbut04512
ECM-receptor interaction
bbut04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
bbut00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
142035447 (TNR)
04518 Integrin signaling
142035447 (TNR)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
142035447 (TNR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
bbut00536
]
142035447 (TNR)
Glycosaminoglycan binding proteins [BR:
bbut00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
142035447 (TNR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_TEN
EGF_Teneurin
FN3_DSCAM-DSCAML_C
EGF_Tenascin
Fn3_PBP1
Fn3_Dep-1_3rd
Pur_ac_phosph_N
Fn3_Dep-1_2nd
Fn3_VIN3
Fn3_ROS1
Interfer-bind
EGF_2
FN3_Tor_3rd
Lzipper-MIP1
DUF1192
Motif
Other DBs
NCBI-GeneID:
142035447
NCBI-ProteinID:
XP_074893646
LinkDB
All DBs
Position
10:11158837..11187903
Genome browser
AA seq
1354 aa
AA seq
DB search
MGTDSENPVLRNILISFNLLLLGAVLKPFECRLEVTELAERPAVDEEGGLANCSPPIKEQ
PMVFHHIYNINIPVDSCCSSMFKSSDEEVSSEDDRLAEYTEQTSDSESQVTFTHRINLPK
QACKCSTSLPSLQELLSRIEMLEREVSMLRDQCTSNCCQENAATGQLDYTPQCSGHGNFS
LESCSCVCMEGWAGSNCSEPRCPRGCSSRGVCLEGQCICDNDYGGEDCSQLRCPAGCGSR
GLCVDGECVCEEGFTGEDCSQLRCPRDCSGKGHCANGTCICWEGYVGEDCGWLHCPNTCS
GRGVCQDGLCICEEGYEGQDCSAVAPPENLRVTGISDSSIELTWDSPGAATEYVVSYQPV
GPGGTQLQQRVPGDWSSITITELEPGIAYNVSVYAVISDVLSIPVTSKVMTNLATPQGLK
FKTITETTVEVQWEPFSFPFDGWEISFIPKNNEGGVIAQLPSTVTTFNQTGLKPGEEYTV
TVVALKEQARSPPTSDSISTLIDGPTQILVRDVSDTVAFVEWTPPRAKVDAILLKYGLVD
GEGGRTTFRLQPPLSQYSLQALRPGARYHLAVSALRGANESRPALAQFTTEIDAPKNLRV
GSRTPASLELAWDNSEAEAHSYRVVYSTLAGEHYHEVLVPRDTGPTTRATLADLVPGTEY
GIGISAVMDSQQSVPATMNARTELDSPRDLLVTASTETSISLAWTKATGPIDHYRVTFTP
ASGMASEVTVPWDKSQLTLSELEPGTEYTISIIAERGRQQSLEATVDAFTGVRPITQLHF
SQLTSSSVNVTWSDPSPPADRLILTYSPRDKEEAQQVTLDGTRRHASLTGLQPSTEYLVS
LVAMHGAISSEPVVGSITTGIDAPKDLRVGNVTQESMMIYWSPPIAAFDHYRMSYRAAEG
RTDSTAITSDATEYALRHLQPATKYEIRVKSVRGREESEVASITVHTAMDAPLGVTATNV
TPTEALLQWNPPLSEVESYVLILTRHAVAAETILVDGVNQEYQLTNLLPSTTYTVFMYAT
NGPLTSQTISTNFTTLLDPPTNLTASEVTRRSALLSWVPPVGAIENYVMTYRSTDGSRKE
LIVDADDTWIRLEGLSETTEYTVRLQAAQNAMRSGFVSTTFTTGGRVFANPQDCAQHLMN
GDTLSGVYTISINGDLSQRVQVYCDMTTDGGGWIVFQRRQNGLTDFFRKWADYRVGFGNL
EDEFWLGLDNIHKITSQGRYELRIDMRDGQEAAYAYYDKFSIGDSRSLYKLRVGDYNGTS
GDSLTYHQGRPFSTKDRDNDVAVTNCAMSYKGAWWYKNCHRTNLNGKYGESRHSQGINWY
HWKGHEFSIPFVEMKMRPYNHRNISGRKRRSLQL
NT seq
4065 nt
NT seq
+upstream
nt +downstream
nt
atggggactgacagtgaaaacccagtcctgaggaacatactcatcagcttcaacttgctt
ctgctgggagctgtcctcaagccttttgagtgccgactggaggtgacagagctggctgag
aggccagcagtggatgaggagggtggccttgccaactgcagcccacccatcaaagagcag
cccatggtcttccaccacatctacaacatcaacatccctgtggacagctgctgctcatcc
atgttcaagtcttcagacgaggaggtgagttcagaagacgaccggctggcagagtacacg
gagcagacctccgacagcgagagccaggtcaccttcacccacaggataaacttgcccaag
caggcctgcaagtgctccacctcccttccgtccctgcaggagctgctgagcaggattgag
atgctggagagggaggtctccatgctccgggaccaatgcacctccaattgctgccaagaa
aatgcagccacagggcagctggactacaccccacagtgcagcggccacgggaacttcagc
ctggagtcgtgcagctgcgtgtgcatggagggctgggcaggcagcaactgctccgagccc
cgctgccctcggggctgctccagccgtggtgtctgcctggagggccagtgcatctgtgac
aacgactacgggggcgaggactgctcccagctccgctgccccgccggctgtggctcccgc
gggctctgcgtggatggcgagtgcgtctgcgaggagggtttcaccggggaggattgctcc
cagctgcggtgcccccgcgactgctcggggaagggccactgcgctaacggcacgtgcatc
tgctgggagggctacgtcggggaggactgcgggtggctgcactgccccaacacctgcagc
ggccgtggggtctgccaggacggtctctgcatctgcgaggaaggctacgaagggcaggac
tgctcggcagtggctcctcctgaaaacctgcgagtgacagggatcagcgacagctccatc
gagctgacatgggacagccccggggcagctaccgagtacgtcgtctcataccagccagtg
gggccagggggcacccagctccagcagcgggtgcccggggactggagcagcatcaccatc
actgagctggagcccggcattgcctacaatgtcagcgtctatgcagtcatcagcgatgtc
ttgagcatccctgttacctccaaagtgatgaccaacctcgccacaccacaggggctgaag
ttcaagaccatcacagagacaacggtggaggtgcagtgggagcccttctccttccccttc
gacggctgggagatcagcttcatccccaagaataacgagggcggtgtgatcgcccagctc
cctagcaccgtcaccaccttcaaccagacggggctgaagccaggcgaagagtacaccgtc
actgtggtggccctgaaggaacaagccaggagccctcccacctccgacagcatctcaacc
ctcatcgatggcccaacacagatcctggtgcgggacgtctccgacacagtagccttcgtg
gagtggacaccgccgcgcgccaaggtggacgccatcctgctgaagtacgggctggtggac
ggggagggcgggaggaccaccttccgcctgcagccccccctcagccagtactccctgcag
gccctgcgccccggcgcccgctaccacctcgctgtcagcgccctccggggtgccaacgag
agccggccagccctcgcccagttcaccacagagatcgatgcccccaagaacctgcgggtg
ggctcgcggacgcccgccagccttgagctcgcctgggacaacagcgaggccgaggcgcac
agctacagggtggtctacagcaccctggccggggagcactaccacgaagtcctggtgcca
cgcgacaccggtcccaccacccgggccaccctcgcagatctggtgccgggaacagagtac
ggcatcgggatttcggccgtgatggacagccagcagagcgtgccggcgaccatgaatgcc
agaaccgagcttgacagcccccgggacctcctggtgacagcctccacagagacatctatc
tcgctggcctggaccaaagccacgggtcccattgaccactaccgtgtcaccttcactcct
gcctctgggatggcctccgaagttacggtgccctgggacaagtcacagctcaccctctcg
gagctggagcccggaacggagtacaccatctccatcattgccgagaggggacgccagcag
agcctggaggccactgtggatgccttcacaggggtccggcccatcacgcagctccacttc
tcccaactgacatcctccagtgtgaatgtcacgtggagtgacccatccccaccagcagac
cgcctcatcctcacctacagcccccgggacaaggaagaggcacagcaggtcacactcgat
ggcacccgcaggcatgccagcctgacgggcttgcagccatccaccgagtacctggtgtca
ctggtggccatgcatggtgccatcagctccgagcctgtcgtgggctccatcacgacaggg
attgatgcgccaaaggacctcagggtgggcaacgtcacccaggagtccatgatgatctac
tggagccctcccattgctgccttcgaccactatagaatgtcctatcgtgccgccgaagga
aggacagacagcaccgccatcaccagcgatgccaccgagtacgccctccgccacctgcag
cctgccaccaagtacgagatcagggtgaagagcgtgcggggccgggaggagagcgaggtg
gcctccatcaccgtgcacacagccatggatgcccccttgggggtcacagccaccaatgtc
acccccaccgaggcactgctgcagtggaacccaccactgtcggaagtggagagctacgtc
ctcatcctcacccgccacgcagttgcagcagaaacaattctcgtggatggagtcaaccag
gagtaccagctgaccaacctcctgcccagtaccacctacacagtctttatgtatgccacc
aatgggcctctcaccagccagaccatcagcaccaacttcacaactcttttggatcctcca
acaaatctgactgccagtgaagtcactcgacggagcgccctgctttcctgggtgcctcct
gtgggagcgatcgagaactatgtcatgacctacagatccactgatggcagccggaaggag
ctgattgtggatgctgatgacacatggatccgcctggagggactttctgagaccacagag
tacactgtgcgcctacaagctgcccaaaatgccatgcggagcggcttcgtctccactacc
ttcactacaggtggacgtgtctttgctaaccctcaggactgcgcccagcacctgatgaat
ggagacacactgagcggcgtctacaccatctccatcaacggggacctcagccagcgggtt
caggtctactgtgacatgaccaccgatggaggcggctggattgtcttccagaggcggcag
aacgggctgactgatttcttccggaaatgggcagattaccgggttggcttcggaaacttg
gaggatgagttttggctgggcttggacaacatccacaagatcacgtcccaagggcgctac
gagttgcgaatagacatgagggatggccaggaagcggcgtatgcctactacgacaagttc
tccatcggcgactcccggagcctgtacaagctacgggttggggactacaatggcacttca
ggggactccctcacctatcaccagggccgccccttctccaccaaggacagggacaacgat
gtcgctgtgaccaattgcgccatgtcctacaaaggggcctggtggtataagaactgccac
cgcaccaacctcaatggcaagtacggagagtcccggcacagtcaggggattaactggtac
cattggaaaggccacgagttctccatccccttcgtggaaatgaagatgcgaccttacaac
caccgtaacatctctgggaggaagcgacggtccctacagctctga
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