Buteo buteo (common buzzard): 142035923
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Entry
142035923 CDS
T11399
Symbol
RC3H1
Name
(RefSeq) roquin-1 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
bbut Buteo buteo (common buzzard)
Brite
KEGG Orthology (KO) [BR:
bbut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bbut03000
]
142035923 (RC3H1)
04121 Ubiquitin system [BR:
bbut04121
]
142035923 (RC3H1)
Transcription factors [BR:
bbut03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
142035923 (RC3H1)
Ubiquitin system [BR:
bbut04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
142035923 (RC3H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
Prok-RING_4
zf-CCCH
zf-C3HC4_3
zf-C3HC4
zf-CCCH_UNK
zf-C3HC4_2
zf_CCCH_4
FYVE
zf-CCCH_4
Vesi_VP2
PaaA_PaaC
Baculo_IE-1
zf-RING_4
zf-RING_10
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
142035923
NCBI-ProteinID:
XP_074894728
LinkDB
All DBs
Position
10:11546038..11627825
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AA seq
1124 aa
AA seq
DB search
MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD
IELLPVNSALLQLVGAQVPEQQPITLCSGAEDTKHYEEGKKCVEELALYLKPLSSARGVG
LNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLS
SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT
SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAP
DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL
ANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGTDQQQPPQHSKYKTYMCR
DMKQRGGCPRGASCTFAHSQEELEKFRKMNKRLVPRRPLSASLGQLNEVGLPSGAILSEE
GGVDLPNRKTSALPNGIVSTGSTVTQLISRGTDSGYETALKPGKMDHLSSSAPGSPPDLL
ESGPKSSISALPVNPHSMPTRAPTDLPSVSVTKQLQMVPRGSQLYNTQQADMFYQDPRGA
APPFEPAPYQQGVYYPTQSMSRFVRPPPSAPEPGPPYLDHYPPYLQDRVVSPQYTQPQQY
PPMGQPIYPPHYDSRRVYTPVQPYQRDEIVRGSPVPIEIPQAAVPSYVPESRDRYQQTEG
YCPVAPHLSQIRPSCHRPHPSLDELHRRRKEIMAQLEERKVISPPPFAPSPTLPHPFHSE
EYLDEDLKVAGKYKGNDYSQYSPWSCDTIGSYIGTKDAKPKDVVAARSVEMANVDSKAMR
DQRLDMQRRAAETGDDDLIPFGDRPTVSRFGAISRTSKAMYQNSGPMQAMAVQGATTKSI
ISDYNPYGTHGGWGGSPYTPHQNIPSQGRFNDRERLSMSDVAGHGKQLPSAEREQQLRME
LQQVDHQISQQTQMRGLEAVSNRLLLQREATTLAGQPQPPPPPPKWPGMISSEQLSLELH
QVEREIGKRTRELSMESQSSLDIKTKLGTTKQTENGQLEPQSKVPAEDLALTFSSDVPNG
SALTQENIGLLSNKAASLSLSEDPEGGGDNHDSQRAGVTPTSAP
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtacaagctccacaatggacggattttctctcctgcccgatttgcacgcagact
ttcgacgaaacaatccggaagccaatcagcttgggttgcggccacactgtctgcaagatg
tgcctcaacaagctccaccgtaaggcatgcccttttgaccagaccactatcaatacagac
attgaactccttcctgtgaactcagccttgctgcaactagtgggtgctcaggttcctgag
cagcagccaattactttatgtagtggagctgaagataccaagcattatgaggagggcaag
aaatgtgtggaagaattagcattgtacctcaaaccactcagcagcgcgagaggtgtgggt
cttaacagtaccactcagagtgtgctaagtcgtcccatgcaaaggaaacttgtgacatta
gttcattgccagctagtggaggaagaagggcggatcagagccatgcgtgcagcacggtca
cttggtgaaagaacagtcacagagctcattcttcagcatcaaaatcctcagcagctctct
tccaacctctgggctgcagtgagagctagagggtgccagttccttggaccagcaatgcaa
gaggaggctttaaagctggttctactggcgctggaagatggatcggctttgtcacgaaag
gttttggttctctttgtggttcagaggctggagccgcgatttcctcaggcttccaaaact
agcattgggcatgttgtccagcttctttacagagcctcatgcttcaaggtgacaaagcga
gatgaggattcctccctgatgcaactgaaggaggagtttcggacttacgaagctttgaga
agggaacatgattcccagatagttcaaatagctatggaagcaggtttacgcattgcacca
gatcagtggtcctcactgttatatggagaccagtctcacaaatcccacatgcagtctatc
attgacaagttgcagaccccagcctcatttgcacagagtgttcaggaattaactattgct
cttcagaggactggagatccagctaacctgaatcgtcttcgacctcacttagagctgctg
gcaaatattgatcccagtccagatgctccacctccaacatgggaacaactggaaaatgga
ctagttgctgtgaggactgtggttcatggcttagttgattatatccagaatcacagcaag
aagggaacagatcagcaacagcctcctcagcacagcaagtacaagacatacatgtgccga
gacatgaaacagagaggaggatgcccccgaggggccagctgcacctttgcacattcacag
gaggagctagaaaaattccgtaaaatgaacaagcgtctagttcccagaagacccctgagt
gcctccctgggccagctaaatgaggtgggcctgccttcgggagctatcctctcggaggaa
gggggagtggacttgcccaataggaagacgtctgctctgccaaatggaattgtgtcaacg
ggcagcacagtgacgcaacttatttctcgagggactgactctggttatgaaactgctctg
aagccagggaagatggaccatctgagtagcagtgcccctggatcccctcctgacttgctg
gaatctggccccaagagctctatttctgccttacccgtgaaccctcattccatgcccact
cgggcaccaacagatctgccttcagtgtctgtcaccaagcagttgcaaatggtaccacga
gggtctcagttgtataatactcagcaagcagatatgttttatcaagatcctagaggagct
gccccaccatttgagccagcaccctaccaacaaggagtttactatcccactcagtccatg
tctcggtttgtccgacctcctccatcagctcctgaacctggtccaccttatttagaccat
tacccaccctaccttcaggatcgtgtggtgagcccacagtacacgcagccacagcagtac
cctcctatgggacaacccatatacccaccacactatgacagccgtcgtgtatatacccct
gtccagccctatcagcgagatgagattgtccgaggaagccctgtacccattgaaattcca
caagctgctgtaccttcctacgtacctgaatccagagacagataccagcaaacagaaggt
tattgcccagtggctccacatctcagtcagatcagaccttcatgccacaggcctcatccc
agcctggatgaacttcaccgacgaaggaaagagatcatggcccagctagaagagaggaag
gtgatttctccacctccttttgcaccatcaccaaccttgcctcatccatttcattcagag
gagtacttggatgaagacctgaaggtagctgggaaatacaaaggaaatgactacagccag
tactctccctggtcctgtgacaccatcggctcctacattggaaccaaagatgcaaaaccc
aaagatgttgtggcagcaaggagtgtggagatggcgaacgtagatagtaaagccatgcgt
gaccagcgattagacatgcagcgaagagcagcagagactggtgatgatgacctcattcca
tttggagaccgaccaactgtgtcaagatttggggctatctcccgtacttccaaagcgatg
taccagaattctggtcccatgcaggccatggcggttcagggagctaccaccaaatcaatc
atttcagactacaatccttatggaactcacggtggctggggaggctctccatatactcct
catcaaaatataccttctcagggacgtttcaatgacagggagagactgtccatgtcagat
gtggctggtcatgggaaacagttgccctcagctgaacgagagcagcaactgcgcatggag
ctgcagcaagtagaccatcagattagccagcagacacaaatgcgaggactagaggctgtt
agtaacaggctgctgttgcagagggaggcgactaccctggcaggccaaccacagccccca
cccccacctcccaagtggcctgggatgatctcaagtgaacagctgagcttggagctacac
caggtggaaagggaaattgggaagagaacccgtgagctgagcatggagagccagtcttca
ctggatataaaaaccaaactgggcaccactaaacagacagaaaatggacaattagaacca
caaagcaaggttccagctgaggacctcgcactgacgttcagcagtgatgttccaaatgga
tcagccttgacacaagagaacattggcctcctgtcaaacaaggcggcatctctcagcctg
tcagaggacccagagggaggaggagacaaccacgactcccagagagcgggagttacgccc
acatctgctccatga
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integrated database retrieval system
