Buteo buteo (common buzzard): 142035936
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Entry
142035936 CDS
T11399
Symbol
SMG7
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG7 isoform X1
KO
K14409
protein SMG7
Organism
bbut Buteo buteo (common buzzard)
Pathway
bbut03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bbut00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
142035936 (SMG7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbut03019
]
142035936 (SMG7)
Messenger RNA biogenesis [BR:
bbut03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
142035936 (SMG7)
mRNA cycle factors
Common to processing body (P body) and stress granule
142035936 (SMG7)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_2
Motif
Other DBs
NCBI-GeneID:
142035936
NCBI-ProteinID:
XP_074894767
LinkDB
All DBs
Position
10:11902311..11957975
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AA seq
1228 aa
AA seq
DB search
MGLKSEIPLRVSCSQQGTFDSLQLQFLLQSVLILAVPLTVCALNLRQAEVLKADMTDSKL
GPAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKNRANPNR
SEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQTHTSAIVKPQS
SSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLT
TIFYYCRSIAVKFPFPAASTNLQKALSKALESRDEVKTRWSVSDFIKAFIKFHGHVYLSK
SLEKLSPLREKLEEQFKRLLFQKAFNSQQLVHITVINLFQLHHLRDFSNETEQHSYSQDE
QLCWTQLLALFMSFLGVLCKCPLQNDYQEDSGAAYPLPAVKVSMDWLKLRPSVFQEAVVD
ERRYIWPWLISLLNSFQPHEEDLSNNNATPLPEEFELQGFLALRPSFRNLDFSKGHQAIT
GDKEGQQRRIRQQRLIFTGKWIADNQPRLIQCENEVGKLLFLTEIPELLLEDPSEAKESL
ALQETSVADPLSTDGSPGLKSVLSSGRSLNNNCDAGEKPMVTFKENIKPREINREQGRIY
PPKDVGRERRDYSKGIVANKNDGKKDNNKRKNETKKCGLDKMQEAGKQNVAVQVKSQTEM
RKTPVSEARKTPVTQTPSQASSSQFIPIHHPGAFPPLPSRPGFPPPTYVVPPPVAFSMST
GYTFPGGVSVPGTFLQPTAHSPAGNQVQGGKQSHIPYSQQRPSGPGPMTQGPQQTPPPSQ
QPLSSLPAQATAQSASQLQVQALAQQQQQQSPTKAVQGLGKSPPHHSGFQQYPQTDSSKQ
LWNPPQVQGSLGKIIPVKQSYYLQAQDPLKLFEQSLQPPVMQQQPLEKKMKPFPMEPYNQ
NPSEVKVPEYYWDSSYGMADNRVMAQQSNMDRRGKRQGVFRPEQDAVSRMTFEDPKSSPL
LPPDLLKSLAALEDEEELIFSNPPDLYPALLGPLASLPGRSLFKSLLEKPSELMSQSSSF
LSLSGFSLNQERYPNNSMFNEVYGKNMNTSTKTEVTPSVAHQETSLYSLFEGTPWSPSLP
ASSDHSTPASQSPHSSNPSSLPSSPPTHNHNSVPFSNFGPIGTPDNRDRRVADRWKTDKP
AIGGFGLDYLPATSSSSESSWHQSSAPSGTWAAQGPPAMEDSSAVLMESLKSIWSSSMMH
PGPSALEQLLMQQKQKQQRGQGTMNPPH
NT seq
3687 nt
NT seq
+upstream
nt +downstream
nt
atgggactcaaatcagagatacccttgagggtttcctgcagccagcaaggaacctttgac
agcctccagcttcagttccttctgcagtcagtactgattttggcagtgccattgaccgtt
tgtgctcttaatttgaggcaggcagaagtcctgaaggctgacatgacagattcaaagctg
ggtccagcagaagtctggacgtccagacaggctctacaggacttatatcagaaaatgcta
gtgaccgatttggaatatgctttagataaaaaagtggagcaggacctttggaatcatgcc
tttaaaaatcagatcacaacgctacagggtcaggcgaaaaatagagcaaatccaaatcgg
agcgaagttcaggcgaacctttctctgttcttagaggcagctagtggcttctacacacag
ttattacaggaattgtgcacagtttttaatgtagacttgccatgtcgtgtaaagtcttcc
cagctgggaatcattagcaataaacagacgcacaccagcgccatagtgaagccgcaatct
agctcctgctcttacatctgccagcactgccttgtccaccttggagatattgctcgctat
aggaatcagaccagccaggcagagtcttactacagacatgcagctcagcttgtcccttct
aatggtcagccttataatcaattggctattctagcttcctccaaaggagaccacttgacc
acaattttctactactgcagaagcattgctgtgaagtttcctttcccagctgcctccact
aacctacagaaagcactttctaaagcactggaaagtcgtgatgaggtgaagactcgatgg
agtgtgtctgacttcatcaaggcatttattaaattccatggccatgtgtacctgagtaag
agcttggagaagctgagcccacttcgagaaaagctggaagaacagttcaagaggttgtta
ttccaaaaggccttcaattctcagcagttagtacatattactgttatcaatctgtttcaa
ctacaccacctgcgagacttcagcaatgaaacagagcagcacagctacagccaggatgag
cagctctgctggacacagttactggctctcttcatgtcctttcttggagttctgtgcaag
tgtcctttacaaaatgactaccaggaggactctggggctgcatatcctcttccagctgtg
aaggtttcaatggactggctgaaacttaggcccagtgttttccaggaggcagtggttgat
gaaagacggtacatatggccctggctgatttctcttctaaacagcttccagcctcatgag
gaagatctatccaataataatgcaaccccccttccagaagaatttgagttgcaaggattc
ttggctctgaggccttcattcaggaacttggatttttccaaaggccaccaggcaattaca
ggagataaggaagggcaacaacgtcggatacggcaacagcgcctgatcttcacaggcaaa
tggatcgctgataaccagccgaggttgattcagtgtgaaaatgaggtaggaaagctgttg
tttttgacagaaatcccagaactattactagaggaccctagtgaagccaaagagagtctc
gccttgcaggaaacatctgttgcagacccactatctacagatgggagccctggactcaaa
tcagttctgtcctctggcagaagcctgaacaacaactgtgatgcaggagaaaaaccaatg
gtcacattcaaagagaacatcaaaccacgggaaattaacagagagcaagggcgaatctat
ccccctaaagatgtaggtagggaaagacgggactatagcaaaggaatagtagccaataag
aatgatggaaagaaggacaacaataaaagaaagaatgagaccaagaagtgcggcttggat
aaaatgcaggaagcaggaaaacagaacgtggcagttcaggtgaaatcccagacagagatg
aggaagactccggtgtctgaagccaggaaaacacctgtaactcagactccaagtcaggcc
agcagttctcagttcatccccattcatcacccaggagccttccctccccttcctagccgg
ccagggtttccacctccaacctacgttgtcccccctcctgtggctttctccatgagcacg
gggtacaccttcccaggtggcgtttctgtcccaggaaccttcctccagcccacagctcac
tcgcctgcaggaaaccaggtgcaaggtgggaaacagtcccacattccttacagccagcaa
cggccctctggaccagggccaatgacccagggacctcagcaaacaccacctccttcccag
caacccctctcatctttaccagctcaggcaacagcacagtctgcaagccagttacaggtc
caagctctggcccagcaacagcagcaacagtcccctacgaaagctgtgcagggcctgggg
aagagcccgccacaccactccggattccagcagtatccgcagacagactcatcaaagcag
ctctggaacccacctcaagtccaaggctcactggggaagatcatacccgtaaagcagtcc
tactacctgcaggcccaggaccctctaaaattatttgaacagtcattacagcctcccgtg
atgcaacagcaacctctggagaaaaaaatgaagcctttcccaatggagccatataaccag
aacccctcagaagtcaaggtgccagaatattactgggactcttcctatggcatggctgac
aatagggtgatggcacagcaatctaacatggaccgcaggggaaaacggcaaggagtcttc
cgcccagagcaggatgctgtctccaggatgacctttgaggaccccaagagctcccctctg
cttcctccggacctgttaaagagtctggctgccttggaggatgaggaagagctgattttc
tctaatcctcctgatctttacccagctctgctggggcctctcgcctctcttcctggacga
agcctatttaagtccctgctggaaaaaccatcagaattgatgtctcagtcgtcgtctttc
ctgtccctcagtggcttctctcttaatcaggaaagatatccaaataacagcatgttcaat
gaggtatatgggaaaaacatgaataccagcacaaaaacagaggtcaccccttcagttgct
catcaggagacttcactatattctctctttgaggggactccatggtctccatcccttcca
gccagctcagatcattcgacaccagccagccagtctcctcactcctccaaccctagcagc
ttgccaagctcccctccaacccataaccacaattctgttcccttctccaactttggacct
attgggactccagacaacagagacaggagagtcgcagaccgctggaaaacagataagcca
gcgataggagggtttggtctggactatctcccagcaacatcgtcatcttcagagagcagc
tggcaccagtccagtgctcccagtggcacctgggcagcccaaggccctcctgctatggag
gactcctcagctgtgcttatggagagcctgaagtccatctggtccagttccatgatgcat
cctggaccctcagccctggagcagctgttaatgcagcagaagcagaagcagcaacgcgga
caaggcaccatgaacccgccgcattga
DBGET
integrated database retrieval system
