Buteo buteo (common buzzard): 142037843
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Entry
142037843 CDS
T11399
Symbol
MSH6
Name
(RefSeq) DNA mismatch repair protein Msh6 isoform X1
KO
K08737
DNA mismatch repair protein MSH6
Organism
bbut Buteo buteo (common buzzard)
Pathway
bbut03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bbut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
142037843 (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbut03400
]
142037843 (MSH6)
DNA repair and recombination proteins [BR:
bbut03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
142037843 (MSH6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
MUM1-like_PWWP
nSTAND_NTPase5
WPP
Motif
Other DBs
NCBI-GeneID:
142037843
NCBI-ProteinID:
XP_074898548
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All DBs
Position
12
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AA seq
1374 aa
AA seq
DB search
MSRQSTLLRFFPKASPAPPRPAAPPPAPAPAPAPVPPQAGAGTRRRVSGEQNGRQATATS
PTAAASNGAPGGAAARRKEAGEKGGGDGAAAKAPSVSCEYSPGDLVWAKMEGYPWWPCLI
YNHPTERTIVRGKGKSTRVHVQFFDDSPTRGWVSIKYLRPYKGSSDGETQKGGMFYSTKP
EIKRAMVLADDAMSKDKTKRLELAVCSEPSDTEEEEEEEEEMEQMSESASGNSDDCNSEE
DVKSNKRVMSRESAIKAKRRRVLDSDSDHDGSDVEFKPDVKEVASSEEGSSGVDENESTD
TETDAESVAESPIKVPSKRKRREINRPAKRSSLENERSETPKRAATVSLEAKSKLTSFAA
PETFESQANACSGGTSGFAVWEHEKLDWLEEGKKKDAHRRRQSDPGYDPCTLYVPEDYLN
KCTPGMRRWWQLKSQNFDAVIFYKVGKFYELYHMDAVTGVNELGLIFMKGTWAHSGFPET
AFGRFSDVLVQKGYKVARVEQTETPEMMETRYKSMAHPTKFDKVVRREICRIITKGTQTY
SVLDCDPSENHNKYLLCVKEKEDSSGQRVYGVCFVDTSVGKFYVGQFSDDRHCSRFRTLV
AHYTPVQVLYEKGNLSVDTQKILKGSLVSCIQEGLISGSQFWNASKTLKVLLEEGYFKEK
QSSENGCSLPPVIKSLTSESDSLGLTPGENSELALSALGGCVFYLKKCLIDQELLSLANF
EEYVPVDIDTAKTTSPSSFFAKTDQRMVLDGVTLMNLEVLQNGTNGTTEGTLLERIDSCC
TPFGKRLLKQWLCAPLCNPKSINDRLDAVEDLLAVPDKMSEVSEHLKKLPDLERLLSKIH
SIGSPLKSQNHPDSRAIFYEEIKYSKKKIADFLSALEGFKVMNEIVDVMEEIASDFKSKI
LKQLVTRKAKNPDGRFPDLSAELRRWDTAFDHNQARKTGVITPKAGFDPDYDKALQDIKA
VEEDLHKYLDKQRKLLGFKSMLYWGAGKNRYQMEIPESVVSRNLPEEYELKSTRKGYKRY
WTKEIEKMLAAMVNAEERRDAALKDCMRRLFYNFDKNSKDWQTAVECIAVLDVLMSLANY
SQDGGGPLCRPVILLPVDSAPPFLELKNSRHPCITKTFFGDDFIPNDIVIGSKDEDSSSE
ASCVLVTGPNMGGKSTLMRQAGLLVIMAQLGCYVPAEVCRLTPIDRVFTRLGASDRIMAG
ESTFFVELSETSSILQHATEHSLVLVDELGRGTATFDGTAIASAVVKELAEKIKCRTLFS
THYHSLVEDHSHNTAVRLGHMACMVENESEDPSQETITFLYKFIEGACPKSYGFNAARLA
NIPEEVIQKGHRKAKEFEKMTLSLRVFRYLCLVVDGATSDANAVQKLTAMINHL
NT seq
4125 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggcagagcaccctgctccgcttcttccccaaggcctccccggcaccgcctcgg
ccggctgcaccgccacccgcaccggcacccgcacccgctcccgtccctccgcaggccggc
gccgggacccgccgccgcgtttcaggggagcagaatggccgccaggccaccgccaccagc
cccaccgccgcggcgagcaacggtgcaccgggcggagcggcggcccggcgtaaggaggcg
ggggagaagggcggaggggacggcgccgccgccaaggcccccagtgtctcctgtgagtat
tcacctggtgacttggtctgggccaagatggaaggttatccttggtggccgtgtctcata
tacaaccatccgactgaaagaacaatagtcagaggaaaagggaaatccactcgtgtccac
gtacagttttttgatgacagccctacaaggggctgggtcagtattaaatatctgaggcca
tataaaggttcatcagatggggagacacagaagggaggtatgttttatagtacaaagcct
gaaattaagagagcaatggtgctagcggacgatgcaatgagtaaagataaaactaagcgg
cttgaactggcagtatgcagtgaaccttcagacacagaggaggaggaggaggaagaggag
gaaatggagcagatgagtgaaagtgcatcaggcaacagtgatgactgcaatagtgaggag
gatgtgaagagtaataagcgagtaatgagcagggaaagtgccataaaagccaaaagaaga
agagtgttggattctgacagtgatcatgatggttctgacgtagagttcaagcctgatgtg
aaagaagtggcaagcagcgaggaaggtagtagtggggtggatgaaaatgaatctactgac
acagagacagatgcagagagtgtcgcagaaagccccataaaagtcccttctaaacgaaag
agaagagagataaacaggcctgctaaaaggagtagcttagaaaatgaacgttctgaaacg
cccaaaagagcagcaacggtttctttagaagccaagtctaagctgacatcatttgcagca
cctgaaacttttgaatctcaagcaaatgcttgcagtggaggcaccagtggctttgcagta
tgggaacatgaaaagcttgattggctggaggaagggaaaaagaaagatgcgcacaggaga
cggcagagtgaccctggttatgacccatgtactctgtatgtacctgaggactatctcaac
aagtgtacgccaggaatgcggaggtggtggcagctgaaaagtcaaaacttcgatgctgtg
attttctacaaagttggaaaattctatgagttgtatcatatggatgcagtcactggtgta
aatgagttgggcctgatctttatgaaaggtacttgggcccattcaggttttccagaaact
gcatttggcagattctctgatgttctagtgcagaaaggctacaaggtagcccgtgttgag
caaacagaaactcctgaaatgatggaaacgcgctacaagtcaatggcccacccaacaaaa
tttgacaaggttgtacgccgagaaatatgcagaatcatcactaaaggaactcagacttac
agcgttctggactgtgatccctccgagaaccataacaaatatcttctgtgcgttaaggaa
aaagaagactcctctggacaacgtgtttatggggtctgctttgttgacacgtcggtgggg
aagttttatgtaggccagttctcagatgaccggcactgttcgaggtttaggactttagta
gcgcattacactcccgtgcaggtactgtatgagaaggggaacctgtctgtggacacgcaa
aagatactgaagggctcacttgtttcttgcattcaggaagggctgatttctggttcccag
ttctggaatgcctctaaaacactaaaagtccttcttgaagaaggatatttcaaggagaaa
cagagctctgaaaatggatgttctctgccccctgtaatcaaatctttgacttcagagagc
gactcgctgggattgactcctggtgaaaacagtgaattagctttgtcagctcttggggga
tgtgtcttctatctcaaaaaatgcttgattgatcaggagctgttatcgctggcaaacttt
gaggagtacgtccccgtggatattgatactgcaaaaactacgagcccaagtagtttcttt
gccaaaactgaccagcggatggtgctggatggagtcaccctgatgaacttggaagtcctg
cagaatggaaccaacggaaccacagaaggtactttgttggaaaggattgattcttgttgt
acgccatttgggaagcgactcctgaaacagtggctctgtgctccgctttgtaatcctaaa
tccatcaatgatcgattagatgctgttgaggaccttctggcagtaccagataaaatgtct
gaagttagcgagcacctgaagaaactgcctgaccttgaaaggctgctcagcaaaattcac
agtattggatcgccacttaaaagtcagaaccatcctgacagcagggccatcttttatgaa
gaaatcaaatacagcaaaaaaaaaattgctgactttttgtctgcactggaggggtttaaa
gtaatgaatgaaattgttgatgtcatggaagaaattgccagcgacttcaaatctaaaatc
cttaagcagctggtcacccgcaaagccaaaaatccagatggccgcttcccagacttgagt
gcagagcttagaagatgggatactgcttttgatcataaccaagctcgaaagacaggagtg
attactccaaaggcaggttttgaccctgactacgataaagcactacaggatattaaagct
gtcgaggaagatcttcacaagtacctggataagcaacgcaaactgcttggattcaaatcc
atgctctactggggggcaggcaaaaaccgataccaaatggaaataccggaaagtgtagta
tcacgtaatttacctgaggaatacgagttgaagtcaaccaggaagggatataagcgttac
tggaccaaggagatagagaagatgctggctgccatggttaatgctgaagagcgcagagat
gcagcactaaaagactgtatgaggcgtttgttttacaactttgataaaaatagcaaagac
tggcagacagctgtggaatgcattgctgtgttagatgtcttgatgtcccttgctaactac
agtcaagatggtggtggaccactgtgccgacctgtaattctactgcctgtggatagtgct
cctcccttcctggaacttaaaaattcacgccatccgtgtattacaaaaactttctttggg
gatgattttattcctaatgacattgtgataggcagcaaagatgaagatagcagtagtgaa
gcttcctgtgtgttagtaactggcccgaatatgggtggcaaatctacgctcatgagacag
gctggtctcctggttataatggctcagctgggatgctacgtacctgctgaagtctgcagg
cttacaccgattgacagagtatttacgaggcttggcgcctcagacagaattatggcaggt
gaaagtaccttcttcgttgaattgagtgagacttccagcattctccagcatgcaacagag
cactcccttgtccttgtggatgaactgggcagaggcacagctacttttgatggaacagct
atagcgagtgcagttgtgaaagaacttgcagagaaaatcaagtgtcggacgctgttctcc
acacactaccattcgctggtagaggatcattcacacaacacggctgtgcggcttggccac
atggcatgtatggttgaaaatgagagtgaggatccaagccaggaaacaattacgttcctg
tataagttcatcgaaggagcatgtccgaagagctatggcttcaatgcagcaagacttgct
aatattccagaggaagttattcagaaggggcatagaaaagcaaaagagtttgaaaaaatg
accctttcactgagagtatttaggtatctctgcctggtggtggatggtgcaacaagcgat
gcaaatgctgttcagaaacttaccgctatgatcaatcatctttaa
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