Buteo buteo (common buzzard): 142039679
Help
Entry
142039679 CDS
T11399
Symbol
COL9A1
Name
(RefSeq) collagen alpha-1(IX) chain isoform X1
KO
K08131
collagen type IX alpha
Organism
bbut Buteo buteo (common buzzard)
Pathway
bbut04510
Focal adhesion
bbut04512
ECM-receptor interaction
bbut04518
Integrin signaling
bbut04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bbut00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
142039679 (COL9A1)
04518 Integrin signaling
142039679 (COL9A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
142039679 (COL9A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
142039679 (COL9A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
bbut00535
]
142039679 (COL9A1)
Proteoglycans [BR:
bbut00535
]
Extracellular matrix (ECM) proteoglycans
Others
142039679 (COL9A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
142039679
NCBI-ProteinID:
XP_074902530
LinkDB
All DBs
Position
15:complement(4395174..4464867)
Genome browser
AA seq
919 aa
AA seq
DB search
MKSNWKITAFFYLCSFLWSFISATIQQQSRLPVILSASQRTDLCPTIRIGQDDLPGFDLI
SQFQIEKAASQGIIQRVVGSTSLQVAYKLGPNVDFRIPTSAIYSNGLPDEYSFLTTFRMT
GATLQKYWTIWQIQDSSGKEQVGVNLNGQMKSVEFSYKGVDGSLQTASFLHLPFLFDSQW
HKLMISVEANSITLFIDCIKIESLNIKPKGKISIDGFAVLGKLKNNPEISVPFEIQWMVI
HCDPLRPQREGCGELPARISQTVIERGLPGPPGPPGPPGPPGVPGIDGIDGERGPNGPPG
PPGPDGDAGKPGSPGLPGEPGADGFTGPDGSRGATGPKGQKGEPGLPGARGFPGKGLLGP
PGPAGAAGLPGEVGRAGPPGDPGKRGPPGPPGPPGPRGTIGLQDGDPLCPNACPPGRPGH
AGLMGMKGQKGSKGESGEPGKQGYKGEEGDQGPSGEVGAQGPPGILGIRGITGIMGPKGT
KGARGLDGEPGPQGLPGAPGDQGQRGPLGEAGPKGERGPQGTRGINGLPGPKGESGLPGV
DGREGIPGMPGAKGEPGKPGAPGDAGLQGLPGLPGSPGVKGIPGPKGNRGPPGVPGLMGN
SGKPGEQGPEGEAGPTGPRGPPGSRGEPGPVGPPGLPGKWGPQGDIGLPGLPGPPGLPGG
KGDRGSVGEPGPKGEQGAPGAEGDGGEKGDLGDMGLPGAKGAVGNPGDPGSRGPEGSRGL
PGMEGPRGSPGPRGLQGEQGAPGLPGSQGPAGKEPTDQHIKQVCMRVMQEQLAQLAASLK
RPEFGAPGLPGRPGPPGAPGPAGENGFPGQLGPRGLPGLKGPPGEIGRKGPKGEPGERGE
RGFPGRGLKGYPGPRGLPGEPGKPSYGREGRDGERGLPGVAGQPGVPGPPGPPGPPGYCE
PSSCRMQAGQRAGKNTKGP
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagcaactggaaaattacagctttcttttacctgtgtagttttctgtggtctttc
atctcagccaccatccagcaacaatcaagactaccagtcattctgagtgccagtcagaga
actgatctctgcccaacaatcaggattggccaagatgacttaccaggctttgacctgatt
tctcagttccaaatagaaaaagctgcttcccaaggaataatccagagagtagtgggctcc
acttctctccaagtggcttacaaattgggacccaacgtagacttcaggatcccaaccagt
gccatatattccaatggattgcctgatgaatattcgtttctaactacttttcggatgact
ggggccacgcttcagaaatactggactatttggcagattcaggattcttcaggaaaagaa
caagttggagtgaatcttaatggtcaaatgaaaagtgttgagttctcttataaaggagtg
gatggaagtctccagactgcatcatttttgcatttgcctttcttgtttgactcccaatgg
cacaaacttatgataagtgtggaagcaaacagcatcacactttttattgactgtattaaa
atagaatccttaaacataaaaccaaaagggaaaatcagcattgatggctttgctgtgctt
ggaaaacttaaaaataatcctgaaatttcagttccgttcgaaatccagtggatggtgatt
cactgcgaccccctgcgaccccagcgcgaaggctgtggcgagctgccggcccggataagc
cagacggtgatcgagagaggtctccctgggccaccaggccccccaggtccgccagggcca
ccaggagttcccggtattgatggcattgatggggagagaggtcctaacggcccccctggt
ccaccgggtccagatggggatgcaggcaaaccaggatccccaggcctgcctggagagcca
ggagctgatggattcacaggacctgatggctcacgtggagccacaggaccaaaaggtcag
aagggtgagccaggactgccaggtgctcgtggatttccaggcaaggggcttcttggacca
cctggtccagctggtgcagcaggacttcctggggaagtaggtcgtgctggtccacctgga
gatccaggaaaaagagggccaccagggccaccaggaccaccaggtcctcggggaacaatt
ggcctgcaagatggtgacccgttgtgtcccaatgcttgtccacctggccgcccaggacat
gctggcttaatgggaatgaagggacagaaaggttcaaaaggagagtctggtgaacccgga
aaacaaggttataagggtgaagaaggggaccaaggacccagtggtgaagtgggagctcaa
ggccctccaggcattctaggtatcagaggtataacaggtataatgggacctaaaggtacc
aaaggagctcgtgggcttgatggtgagcctgggccccaaggtcttcctggtgcacctggg
gatcaaggacagagaggtccactgggagaggcaggtccgaagggtgaaagaggccctcaa
ggtacaagaggaataaatggtctccctgggcctaaaggagagtctggcttaccaggagtt
gatggccgggaagggatccctggaatgcctggagcaaaaggtgaaccaggaaaacctgga
gctccaggtgatgcagggcttcagggactgccaggtttaccaggctctccaggtgtgaag
ggcattcctggcccaaagggtaatagaggtccccctggggtgccaggtttgatgggaaat
tctggtaaaccgggtgaacagggaccagagggagaagcaggtccaacaggaccccgagga
ccaccaggtagcagaggggagccaggtcctgtgggtcctccaggtctaccaggaaaatgg
ggtccccaaggtgatattggacttcctggactgccaggtcctccaggcctacctggtggt
aagggtgaccggggttcagtgggggaaccaggacctaagggtgaacaaggtgcacctgga
gcagaaggagatggaggagaaaagggtgacttaggtgatatgggattaccaggagcaaag
ggagctgttggtaatcctggagaccctggttcccgtgggcctgagggaagtcggggactg
cctggcatggaagggccacgaggttcacctggaccgcgaggcttgcagggtgaacagggt
gccccaggtctgcctggcagccaaggtccagctggaaaagaaccaactgatcagcacatt
aagcaggtttgcatgagagtcatgcaagaacaactagctcagctggcagccagtcttaaa
aggccggaatttggtgctccaggtcttcctggccgaccggggccaccaggtgctccaggg
cctgctggcgaaaatggcttcccaggacagcttggacctcgtggcttgcctggccttaaa
ggtccccctggtgagattggtcgtaaaggtcctaaaggtgaaccaggagaaagaggagaa
agaggatttccaggcagaggactgaaaggttaccctggaccaagaggtcttccaggtgaa
ccaggcaaacccagctacggcagggaaggccgtgatggtgaacgaggtctccctggggtg
gccggtcagcctggggttcctggtcctcccggccctcccggccctcctgggtactgcgag
ccgtcgtcttgcagaatgcaagctggacagagagctggtaagaacacgaaagggccgtga
DBGET
integrated database retrieval system
