Buteo buteo (common buzzard): 142040127
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Entry
142040127 CDS
T11399
Symbol
SRRM1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
bbut Buteo buteo (common buzzard)
Pathway
bbut03013
Nucleocytoplasmic transport
bbut03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bbut00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
142040127 (SRRM1)
03015 mRNA surveillance pathway
142040127 (SRRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbut03019
]
142040127 (SRRM1)
03041 Spliceosome [BR:
bbut03041
]
142040127 (SRRM1)
Messenger RNA biogenesis [BR:
bbut03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
142040127 (SRRM1)
Spliceosome [BR:
bbut03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
142040127 (SRRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
BAF1_ABF1
Motif
Other DBs
NCBI-GeneID:
142040127
NCBI-ProteinID:
XP_074903546
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All DBs
Position
16:3818174..3836624
Genome browser
AA seq
907 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
TAFLELKKEEIKQRQIEQEKLASMKKQDEDKEKRDKEDKDNREKRDRSRSPRRRKSRSPS
PRRRSSPVRRERKRSHSRSPHHRTKSRSATPAPEKKEATPEPEPSVKPKETVVQEATSNS
DIPKAPKPEPPVPETKETSPERNSKKEREKEKEKTRQRSPTRSKSRSRSRSRSPSHSRPR
RRHRSRSRSYSPRRRPSPRRRPSPRRRSPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSS
SSSSSSRSRSPPKKPPKRTVSSPPRKTRRLSPSASPPRRRHRPSPPASPPPKPRRSPTPQ
QSNRARKSRGSVSPSRTSAPKHKSTEKRESPSPAPKPRKAELSESEEDKGGKMAAADSVQ
QRRQYRRQNQQSSSDSGSSSSSEEERPKRSNVKNGEVGRRRRHSHSRSPSPSPRKRQKES
SPRMQMEKRWQSPVMKSRRRRSPSPPPARRRRSPSPAPPPRRRRSPSLPRRRSPSPPPRR
RSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPQSKRRVSHSPPPKQRSSPT
AKRRSPSISSKHRKGSPPSRSNRETRSPPQNKRHSPSPRPRASHTSASPPPPRRGASASP
QRRQSPSPSTRPIRRVSRTPEPKKTKASTPSPRSARRVSSSRSASGSPEPAPKKHQGPPS
PTRSRSPSANWSPAKKAKSPTQSPSPARNSDQEGGGKKKKKKKDKKHKKDKKHKKHKKHK
KEKAAAAAAAAAVAAADTTSVQEDQEAETEPKKETESEPEDNLDDLEKHLREKALRSMRK
AQVSPPS
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atggacgcggggttcttccgcggaacaagtgcagaacaggacaatcgcttcagcaacaag
cagaagaagctgttgaagcagttgaaatttgcagaatgcttagaaaagaaggtggacatg
agcaaagtaaatctggaagtaatcaaaccatggataacaaaacgtgtaacagaaatcctt
ggatttgaagatgatgtagtaattgaatttatattcaaccagttggaagtgaagaatcca
gattccaaaatgatgcaaatcaacctgactggttttttgaatgggaaaaatgctagggag
ttcatgggagaactgtggccactgctattaagtgcacaagaaaacattgctggtattcca
actgcatttctggaactgaagaaagaagaaataaaacagcgacagatagagcaagagaaa
ctggcttctatgaagaaacaagatgaagacaaggagaagagagataaggaagacaaagac
aacagagaaaaaagagacagatccaggagtccaagaagacgcaaatctaggtctccttcc
cctcgaaggaggtcgtcgcctgtcagaagagagcggaaacgcagccattctcgctcccct
catcacagaaccaagagccgtagtgctactcctgcaccagaaaagaaagaggcaactcct
gagccagaaccctctgtgaaaccaaaggagactgttgttcaagaggcaacttcaaacagt
gatatcccaaaagctcctaaacctgaacctcctgtaccggagacgaaggaaacttcacca
gaacgtaattcaaagaaggagagagagaaggaaaaagagaagactcgtcaaagatcccca
actcggtccaagtcaaggtcaagatctcggtcacgctctccatctcattctcgaccaaga
aggcgtcatagatcacggtcaaggtcttactcccctagaaggagaccaagcccaagacga
cgaccatctccaaggagaaggagccctccaaggcgaatgcctcccccacccagacacaga
agaagcagatcccctgtgaggcggagaagacggtcatcagcatccttatctggcagtagc
tcttcctcctcctcctcacgttcccgatcaccaccaaagaaaccacctaaaagaactgta
tccagtcctcctcgtaaaacgcgtaggctctctccttctgcgagccctcctaggcggagg
cacagaccatccccaccagcaagtccacctccaaaaccacgcaggtctccaacaccccag
cagtcgaatcgtgcaagaaaaagccgtggctctgtttcacctagcagaacatcagcaccc
aaacataagagtactgaaaaaagagaatctccttcgccagcaccaaaaccaaggaaagca
gaactgtctgaatcggaggaagataaagggggtaaaatggctgcagcagactctgttcaa
cagaggcgtcagtacagaaggcaaaatcaacagtcctcatctgattctggttcttcatct
tcatctgaagaagaaagacctaagagatccaacgtgaagaatggggaggttggtagacgc
cgacgccattcacattcgcgcagcccatcaccgtctccacgaaaacgacagaaggaatcc
tcccctcggatgcagatggaaaagaggtggcaatcaccagtgatgaaaagtaggaggagg
agaagtccatcgcccccaccagccaggcggcgacggtctccttcacctgcccctcctcct
aggcggcggcggtcaccttcattacctcgtcgaaggtctccatcaccacccccgcgcaga
cgctcaccttctccacggagatactctccaccgatacagagacgatattctccttctcca
ccacctaagagaagaacggcttctccgcctcccccgcctaaacgaagggcatcaccttct
ccacagtcgaaacgcagagtctcccattcgccaccgccaaaacaaaggagctcgccaact
gctaaaaggcgttcaccttcgatatcttccaagcacaggaagggatctcctcccagtagg
tccaatcgggaaacacgttctccaccacaaaacaaaaggcattcaccttcgccacggcct
agagcttctcatacctctgcaagcccaccaccaccacgaaggggagcttcggcttcaccc
cagagaagacagtctccatctccaagcactagacccatcaggagggtatcaagaacgcca
gaacctaagaagacaaaggcttccacaccaagtccacgatctgcgagacgggtgtcttca
tcacggtctgcatcagggtcacctgagccagcaccgaaaaagcatcaaggacctccatct
cctactcggtctcgttctccttctgcaaactggtcacctgcaaaaaaggctaaaagccca
actcagagcccatcacctgcaaggaattcagatcaagaagggggtggaaagaagaagaag
aaaaagaaggataagaagcataaaaaggataaaaagcacaagaaacacaaaaaacataag
aaggagaaggctgcggcggctgcagcagctgctgctgtggctgcagcagataccacgtca
gtacaggaagaccaggaagcagagacagaacccaaaaaggagacagaaagtgaaccagaa
gacaaccttgatgatctagaaaaacacctgcgagagaaggcactgaggtcaatgaggaag
gcgcaagtgtcaccaccatcctag
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