Buteo buteo (common buzzard): 142040361
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Entry
142040361 CDS
T11399
Symbol
CSTF3
Name
(RefSeq) cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
bbut Buteo buteo (common buzzard)
Pathway
bbut03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bbut00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
142040361 (CSTF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbut03019
]
142040361 (CSTF3)
Messenger RNA biogenesis [BR:
bbut03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
142040361 (CSTF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
NRDE-2
TPR_16
TPR_19
TPR_6
Motif
Other DBs
NCBI-GeneID:
142040361
NCBI-ProteinID:
XP_074904285
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All DBs
Position
16:22129408..22180229
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AA seq
718 aa
AA seq
DB search
MSGEGAAADQAAEYVPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVA
QFPSSGRFWKLYIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYK
EKMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNP
MINIEQLWRDYNKYEEGINIHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPP
QNTPQEAQQVDMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQ
YLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKV
HSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALME
YYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPE
KSGEIWARFLAFESNIGDLASILKVEKRRFTAFKEEYEGKETALLVDRYKFMDLYPCSAS
ELKALGYKDVSRAKLAAIIPDPVVAPSIVPVLKDEVDRKPEYPKPDTQQMIPFQPRHLAP
PGLHPVPGGVFPVPPAAVVLMKLLPPPVCFQGPFVQVDELMEIFRRCKLPDTVDEAVRII
TGGLPEIAVEGNGPVENNAMLNKAVKRPHEDSDDDEEKGSVVPPVHDIYRARQQKRIR
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgtccggagagggagcggccgccgaccaggctgctgagtatgtcccagaaaaagtgaag
aaagctgaaaagaaactagaagaaaatccatatgaccttgacgcttggagcattctcatt
cgagaggcacagaatcaacctatagacaaagcacggaagacctatgaacgccttgttgcc
cagttccccagttctggcagattctggaaactgtacattgaagcagagattaaagcaaaa
aattatgacaaagtggaaaagttatttcagcgatgccttatgaaggttttacacattgat
ttatggaaatgttacctttcctatgtacgagaaaccaaggggaagctacctagttacaaa
gaaaaaatggctcaggcatatgattttgctctggataagattggcatggaaatcatgtca
taccagatctgggtggattacatcaattttttgaaaggcgtagaagcagtaggatcttat
gcagaaaaccagaggataacagctgtccgtagggtttaccagcgtggttgcgtgaatcca
atgataaacatagaacagctctggagagattataacaaatacgaagagggcatcaatatt
cacttagctaagaagatgattgaagacaggagtagagattatatgaacgcacgacgggta
gcaaaggaatatgagacagtgatgaaaggtctggaccgcaatgctccctctgtcccccca
caaaataccccacaagaggctcagcaggtagacatgtggaagaagtacatccagtgggaa
aagagcaatcctttgcgtacagaagatcaaactctcataacaaaaagagttatgtttgcc
tatgagcaatgccttttggttctgggacatcacccagatatctggtatgaagctgcacag
tacctcgagcaatctagtaaactgctagctgaaaaaggggacatgaacaatgctaaactt
ttcagtgatgaggctgctaatatttatgaaagagcgatcagcactttattaaagaagaat
atgcttctttattttgcatatgcagattatgaagagagtcgaatgaagtatgagaaagta
cacagcatatataaccgactcctggctattgaagacattgatcccactctggtttatatc
caatatatgaaatttgcaaggcgagcagaaggcataaaatctggaagaatgatatttaag
aaagcaagagaggatgctcggacccgccatcacgtctatgttacagcagctttaatggag
tattattgtagtaaggataagtctgtggcctttaagatttttgagctagggctgaaaaaa
tacggggacattccagaatatgtactggcatatatcgactacctttctcaccttaatgag
gacaataatacaagagttttgtttgaacgtgttttaacttcagggagccttccacctgag
aaatctggggaaatctgggctcggtttttagcttttgaaagtaacattggtgatctagct
agtatactgaaagttgaaaaacggaggtttactgcattcaaggaagaatatgagggtaaa
gaaacagctctgctggtagataggtataagttcatggatttgtacccttgctctgctagc
gaactgaaggcccttggttataaggatgtctcccgtgccaaactggcagctataattcca
gaccctgtggttgcaccttccatcgtgcctgttctcaaagatgaagtagaccgaaaacct
gaatatccaaaaccggacactcaacaaatgattccatttcagccaagacacttagcacct
cccggtttacatcccgtcccaggtggtgtatttcctgttccaccagcagctgtagttctc
atgaagctcctgccacctcctgtttgttttcagggtccctttgttcaagtggatgagctc
atggagatatttagaagatgcaaactgccagacactgttgatgaagctgtacgaataatt
accggaggcctacctgaaatagctgtggagggcaatggacctgtggaaaataacgctatg
cttaataaggctgttaaaagaccacatgaagattctgacgacgatgaggagaaaggatct
gtagttccccctgtacatgacatttacagagcacgacagcaaaagagaatccggtga
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