Buteo buteo (common buzzard): 142040928
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Entry
142040928 CDS
T11399
Symbol
VPS50
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
bbut Buteo buteo (common buzzard)
Brite
KEGG Orthology (KO) [BR:
bbut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bbut04131
]
142040928 (VPS50)
Membrane trafficking [BR:
bbut04131
]
Protein recycling
Others
EARP complex
142040928 (VPS50)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
142040928
NCBI-ProteinID:
XP_074905465
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Position
2:26882014..26983561
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AA seq
965 aa
AA seq
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MQKIKSLMTRQGLRSPQESVHDLSPIESFRIPSKEELRELREEPTDPQAQQEIINSIEEV
YFSNDSFDIVKYELERLPPVLSLQELEEYRDKLKQQQAAVSKKVADLILEKQPAYVQELE
RVTSLQTGLQLAAVICTNGRRHLNIAKEGFTQTSLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDISHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLQYKDLCTHITSDSYIPCLADLCKALWEVMLSYYRTMQWHENHDQDEAVAVSSD
GSNVIGTEENSFDRSYVKKKLEHGLSRIWQDVQLKVKTYLLGTDLSNFKYDDFIFVLDVT
SRLMQVGEEFCGSKSEVLQESIRKQSVNYFKTYHRTRLEELRMFLENETWELCPVKSSFN
ILQLHEFKFMEQSRSPSVSPSKQPASAISTTVTLFEQYCNGGNPFEIQADSKDDETEDVL
ASNGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPVKSVSRETLRSRKRSDYNL
NKVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAVYTFFGRNDT
FESTGLGLSSSRLRTTLNRIQESLIDLEVSADPTGTLTAAEERKEKVPSPHLSHLVVLTS
GNSLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAAKKPFLQQFYSQTVSTASELRKP
VYWIVAAKAIDYEQMLLLMANVKWDVKEIMSQHNIYVDALLKEFEEFNRRLNEVSKRVRI
PLPVSNILWEHCIRLANRTLVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPIPD
KEFVETYIKAYYLTENDMERWIKEHREYSTKQLTNLVNVCLGSHINKKARQKLLAAIDDI
DRPKR
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagatcaagtcgctgatgacccgccagggtctaagaagtcctcaggagagtgtt
catgacctcagtcctattgaaagctttcggattcctagtaaggaggagctcagagaacta
cgtgaagaaccaactgatcctcaagctcagcaagaaataattaacagcattgaagaagtt
tatttttccaatgattcctttgatattgtgaaatatgagttagagaggcttcctccagta
cttagtcttcaagaactggaagagtacagagacaaattaaaacaacagcaagctgctgta
tctaagaaagttgcagacttgattcttgaaaaacagcctgcatatgttcaggaacttgaa
cgtgttacatcattgcagactggccttcagttagcagctgttatttgcacaaatggaaga
agacacctgaatatagcaaaggaaggctttacacaaactagtttggggcttcttgcaaat
caaaggaaacgacagttgcttattggactgctaaagtctctgagaacaataaaaacactg
caaagaactgacgtgcgtttgagtgagatgttggaggaagaggactatccaggagctatt
cagctgtgcttggaatgccagaaagctgccagcactttcaaacactacagttgtataagt
gagttgaattcaaaactgcaagacaccttggaacaaatagaggaacaattggatgtagcg
ctctccaaaatatgtaagaactttgatatcagtcattatacaaaagttcagcaggcttac
aggctgcttggaaaaacacagacagcaatggaccagttacatatgcacttcactcaagcc
attcacaacactgtgtttcaagtagtccttggatatgtggagctgtgtgcaggaaacaca
gacaccaagtttcagaagttacagtataaagacctctgtacacatattacatcagacagc
tacattccgtgccttgctgatctctgcaaagccctctgggaagtcatgctcagttactac
cgaacgatgcagtggcatgagaatcatgaccaagatgaggcggtagctgtgtcttctgat
ggcagcaatgtgattggaactgaagagaacagttttgaccgcagctatgtaaaaaagaaa
ttggaacatgggctttcacgaatatggcaggatgttcaactgaaagtgaaaacatatctt
ctgggaacagatctgtctaacttcaaatatgacgacttcatatttgtacttgatgttacc
agcagactgatgcaagttggagaagaattttgtggcagtaagtctgaagttttgcaagaa
tctatacgaaaacaaagtgttaactatttcaaaacataccacagaacccgtcttgaagaa
ttaagaatgtttttggagaatgagacctgggaactgtgtcctgttaaatcaagctttaac
attctgcagcttcatgaatttaagttcatggagcagtcacgttccccatctgtgtcacct
agtaaacagcctgcttcagcaatttcaacaacagtaacgttatttgagcagtactgtaat
ggaggaaacccatttgaaattcaggccgacagcaaagatgatgagacagaagatgtgcta
gcttccaatgggtatgaatcggatgaacaagaaaaaagtgcatatcaagagtatgatagc
gacagtgatgttcctgaagagttgaaaagagattatgtggatgagcagacaggagatgcc
cctgtgaaaagtgtttctcgagaaactctgaggagcagaaagagatcagattataacctc
aacaaagtgaatgcacctatcctaacaaacactacgctgaatgtaataaggcttgttggg
aaatacatgcagatgatgaatattctgaaaccaattgcgtttgatgtgatccactttatg
tcccagctcttcgattactatctgtatgcagtctatacattttttggccgaaatgacacg
tttgaatcaacaggactgggcctcagcagcagcagattacgtaccacactgaacagaatc
caggagagtctgattgatctggaggtctctgctgatcccacaggaaccctcacagctgct
gaagagagaaaggagaaggtgccaagcccacatctcagtcatctcgtagttctgacatct
ggcaattcgctgtacggtttggcagagagagtggtggccacagaatccttggtatttctg
gctgagcagtttgagtttcttcagcctcatcttgatgcagtgatgccagctgccaagaaa
ccttttcttcagcagttctattctcagacagtgtcaactgccagtgaactacgtaaacca
gtttattggattgttgctgctaaagccattgattatgaacaaatgctgcttctcatggct
aatgtgaaatgggatgtgaaggaaatcatgtcacaacacaatatatatgtagatgctctt
ttaaaggaatttgaagaatttaacagaaggttgaacgaggtgtctaagagagtccgtatt
ccactgcctgtctccaacatcctttgggagcactgcatacgcttggccaatagaactctt
gtggaaggttatgccaatgtaaagaagtgcagcaatgaaggacgtgccttgatgcaactg
gactttcaacaattcttaatgaaactagaaaagttaacagacattaggcctattccagat
aaagaatttgtggagacctacattaaagcatactacctaacagaaaatgacatggaacgc
tggataaaagaacatagggaatattccactaagcagttgaccaatctggtgaatgtttgt
ctgggctcccatatcaacaaaaaggcaagacaaaagctgctagctgctattgatgacata
gacaggcctaaaagataa
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