Buteo buteo (common buzzard): 142041796
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Entry
142041796 CDS
T11399
Symbol
RTCB
Name
(RefSeq) RNA-splicing ligase RtcB homolog
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
bbut Buteo buteo (common buzzard)
Brite
KEGG Orthology (KO) [BR:
bbut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bbut03016
]
142041796 (RTCB)
Enzymes [BR:
bbut01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
142041796 (RTCB)
Transfer RNA biogenesis [BR:
bbut03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
142041796 (RTCB)
Prokaryotic type
tRNA splicing ligases
142041796 (RTCB)
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GFIT
Other DBs
NCBI-GeneID:
142041796
NCBI-ProteinID:
XP_074907039
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Position
19:4797014..4809616
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AA seq
505 aa
AA seq
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MSRSYNDELQYLDKIDKNCWRIKKGFVPNMHVEGVFYVNDPLEKLMFEELRNACRGGGAG
GFLPAMKQIGNVAALPGIVHRSIGLPDVHSGYGFAIGNMAAFDMNDPEAVVSPGGVGFDI
NCGVRLLRTNLDESDVQPVKEQLAQAMFDHIPVGVGSKGVIPMNAKDLEEALEMGVDWSL
REGYAWAEDKEHCEEYGRMLQADPNKVSSRAKKRGLPQLGTLGAGNHYAEIQVVDDIYNE
YAARKMGIDHKGQVCVMIHSGSRGLGHQVATDALVAMEKAMKRDKIIVNDRQLACARIAS
TEGQDYLKGMAAAGNYAWVNRSSMTFLTRQAFAKVFNTTPDDLDMHVIYDVSHNIAKVEQ
HVVDGKERTLLVHRKGSTRAFPPHHPLIAVDYQLTGQPVLIGGTMGTCSYVLTGTEQGMT
ETFGTTCHGAGRALSRAKSRRNLDFQDVLDKLADMGIAIRVASPKLVMEEAPESYKNVTD
VVNTCHAAGISKKAIKLRPIAVIKG
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcagctacaacgatgagctgcagtacctggacaagatcgataagaactgctgg
aggatcaagaagggcttcgtgccgaacatgcatgtggagggcgttttctacgtgaacgac
cccctggagaagctgatgttcgaggagctgcgcaacgcctgccgcggcggaggtgcaggt
ggttttttgcctgcaatgaaacagattgggaatgtggctgcattacccggcattgttcat
agatcaataggccttccagatgtccattctggctatgggtttgccattggcaacatggcc
gcctttgatatgaatgatcctgaagcagtggtttcaccaggtggtgtcggttttgacatc
aactgtggtgtccgcttactacgtacaaatttggatgaaagtgatgtgcagcctgtgaag
gaacagctcgcccaggctatgtttgaccacattccagttggtgtcggctccaaaggtgtc
atccccatgaatgccaaggatttggaagaggcactagagatgggtgtggactggtctctc
cgggaaggctatgcctgggcagaggacaaggagcactgtgaggaatatggaagaatgctt
caggctgaccccaacaaggtttcctcaagagcaaagaagaggggcctgcctcagctgggg
accctgggagcaggaaatcattacgccgagatccaggttgtggatgacatttacaacgaa
tatgctgccaggaagatgggcatcgaccacaaagggcaggtgtgcgtgatgatccacagt
ggcagcagaggtctgggccaccaggttgccacagatgcgttggtggctatggaaaaagct
atgaagcgggacaaaatcatagtgaatgatcgccagctggcatgtgccaggattgcctcc
acagagggacaggattacttgaagggaatggcagctgctggaaactatgcatgggtcaac
cgctcttctatgacttttctaacaagacaggcctttgccaaagtcttcaacacaacccca
gatgaccttgatatgcatgttatctatgatgtgtctcacaacattgccaaagtggagcaa
catgtagtggatggaaaggagcggactctgctggtgcacagaaaaggatcaaccagggcc
ttccctcctcaccatcctcttattgctgtcgattatcaactgactggacagcctgttttg
atcggcgggactatgggcacctgtagctatgttcttactggcacagagcaaggcatgacc
gagacctttggaactacttgccatggagctggtcgtgcactgtctcgagccaaatctcga
cgtaacttggacttccaggatgtattggacaagctggctgacatgggcattgccatccgt
gttgcttctcccaaactggtcatggaagaagcaccagagtcttataagaacgtgacagat
gtggttaacacctgccatgcagctggcatcagcaagaaagccattaaactgagacctatt
gctgttataaaaggctag
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