Buteo buteo (common buzzard): 142042960
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Entry
142042960 CDS
T11399
Symbol
PDZRN3
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3 isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
bbut Buteo buteo (common buzzard)
Brite
KEGG Orthology (KO) [BR:
bbut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bbut04121
]
142042960 (PDZRN3)
Enzymes [BR:
bbut01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
142042960 (PDZRN3)
Ubiquitin system [BR:
bbut04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
142042960 (PDZRN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
Sina_ZnF
zf-C3HC4_3
zf-RING_5
zf-C3HC4_4
Prok-RING_4
zf-TRAF
PDZ_Tricorn
zf-rbx1
U-box
TRAF3_RING
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
142042960
NCBI-ProteinID:
XP_074909670
LinkDB
All DBs
Position
21:4635629..4784362
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AA seq
1061 aa
AA seq
DB search
MGFELDRFNGDVDPDFKCNLCNKVLEDPLTTPCGHVFCAGCVLPWVVQQGSCPVNCQRIS
TKELNHVLPLKSLILKLDIKCDNHARGCEAVVPLQHLGEHAETCDFSPAKCRNRGCRQVL
NLRDVEVHMRERCEARPAGLCEQGCGLMLTHGERRAGGHGCLRALRAHGAALQARAAALE
KALKKEALRAGKREQSLLSRLAAAQLELQVTALRYQKRFTQYSARLDALARARAASPGKG
EETKALTLVLHRDSGSLGFNIIGGRPCVDNQDGSSSEGIFVSKIVDTGPAAKEGGLQIHD
RIIEVNGKDLSKATHEQAVEAFKTAKEPIVVQVLRRTPRTKVFTPSHDSQLVDVGTQTDI
TFEHIMALSKMGSPTPPVSVLDPYLLPEDHPSVHEYYDPNDYMGGIHQEMDRDELELEEV
DLHRVNSQDKLGLTVCYRTDDEDDMGIYVSEIDPNSIAAKDGRLREGDRIIQINGIEVQN
REEAVALLTSEESKNISLLVARPEIQLDEGWMDDDRNDFLDDLHMDMLEEQHHQAMQFTA
SMLQQKKHEEDGGTTDTATILSNQHEKDSGVGRTDDSTRNDESSEQENNVDDHTTSSNTL
GSQKKLTYSHDTLGSGDMQFSNESFISADCTDVDFLGIPVDECERFRELLELKCQVKSAN
PYSLYYHNSTLDMSKSDQESVDRELEMLNEELRNIELECLNIVRAHKMQQLKDQYREPWM
LHNSGFRNYNTSIDVRRHELSDITELPEKSDKDSSSAYNTGESCRSTPLTLEISPDNSLR
RTAEGINCQGNEGAVAYNVSQKNLFASSESHESSTGKCHASAKDPDLGKQLESKERKASD
GSKSPTHGQKPPGSYVSPYHHSPYKHAHIPAHAQHYQSYMQLIQQKSAVEYAQSQMSLVS
MCKDFNSSQSEPRMEWKVKVRSDGTRYITKRPVRDRLLRERAIKIKEERSGMTTDDDAIS
EMKMGRYWSKEERKQHLVKAKEQRRRREFMMQSRLDCLKEQQGAEEKKEMNIIELSHKKM
MKKRNKKIFDNWMTIQELLTHGTKSPDGTRVYNSFLSVTTV
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atggggttcgagctggatcgcttcaacggggacgtagatcccgacttcaaatgcaatctg
tgcaacaaagttctggaggacccgctgaccaccccctgcggccacgtcttctgcgccggc
tgcgtgctgccctgggtggtgcagcagggcagctgccccgtcaactgccagcgcatctcc
accaaggagctcaaccacgtcctgcccctcaagagcctcatcctcaagctggacatcaag
tgcgacaaccacgcgcggggctgcgaggcggtggtgccgctccaacacctgggcgagcac
gccgagacctgcgacttctcccccgccaagtgccgcaaccgcggctgccgccaggtgctc
aacctccgcgacgtggaggttcacatgcgggagcgctgcgaggctcggcccgccggcctc
tgcgagcagggctgcggcttgatgctcacccacggcgaacgccgggccggcggacacggc
tgcctccgcgccctccgcgcccacggagccgcgctgcaggcgagggcggcggcgctggag
aaggcgctgaagaaagaggcgttgcgagccggcaagcgggagcagtcgttgctgtcgcga
ctggcggcggcgcagctggagctgcaggtgacggcgctgcgataccagaagcgcttcacg
cagtacagcgcccgcctcgacgccctggcccgcgcccgcgccgcctcacccggcaagggt
gaagaaactaaagcactgactctcgtccttcatcgtgactctggctctcttggatttaat
attattggtggccgaccatgcgtggacaatcaagatggttcatctagcgaaggaattttt
gtatcaaaaatagttgacacagggcctgctgctaaggaaggagggctacaaattcatgac
aggattattgaggtcaatgggaaggatttatctaaagcaacacacgagcaggcagtagaa
gcattcaaaacagccaaggagcccattgtggtgcaggtcctgagaagaactccacgcacc
aaggtcttcactccttctcacgactctcagctggtagatgtgggcacacagacagatatc
acttttgaacacatcatggctctaagcaagatgggctcacctactccacccgtctctgtg
ctagacccataccttctacctgaagaccatccatcagtgcatgaatactatgacccaaat
gactacatgggaggaattcatcaagaaatggaccgagatgagttggaattagaggaagta
gatttacatagagtgaacagccaggacaagcttggccttactgtgtgttacagaacggat
gatgaagatgacatgggtatttatgtgagtgagattgatcccaacagtattgctgcaaaa
gacggtcgactccgagaaggggatcgcattattcagatcaatggcatagaggtacagaac
cgagaagaagctgtggcacttctcaccagtgaagagagcaagaatatctccttacttgtt
gcaagaccagaaattcagctggatgaaggatggatggatgatgacagaaatgattttctg
gatgacttgcacatggacatgttagaggaacagcaccaccaggcaatgcaatttactgcc
agcatgcttcagcagaagaagcatgaagaggatggaggtaccacagatacagccactatt
ttatctaaccagcatgagaaggacagtggtgtggggcgcacagatgacagcactcgcaac
gatgagagctccgagcaggaaaacaacgtggatgatcacaccacctcctccaacacttta
gggagccagaagaagctgacttacagtcatgacaccctaggaagtggcgatatgcagttc
agcaacgagtcgtttatctcagctgactgcacagacgtcgacttccttggcatccctgta
gatgaatgcgagcgattccgggaactgctggaactgaagtgccaggtgaagtctgccaac
ccttacagtctgtattatcataacagcacgctggatatgagcaaaagcgaccaagaaagt
gttgacagagagctggagatgctgaatgaggagctgcgcaatattgagctagagtgcctg
aatattgtgagagctcataaaatgcagcagctgaaagatcagtaccgggagccctggatg
ctacataacagcgggttccgcaactataacacgagcattgatgttcgcaggcacgagctc
tcagacattacagagctccccgagaagtctgacaaggatagctcgagtgcatataacaca
ggggaaagctgccgaagcacaccactcacactggagatttcccctgacaattcgctgcgc
agaactgcagaaggcattaactgtcaaggtaatgagggggcagtggcatataatgtctcc
caaaagaatttatttgctagctcagaaagtcatgaatccagcactggtaaatgccatgcc
tctgctaaagatccagaccttggcaagcagctggaaagcaaggagagaaaagccagtgat
ggaagcaaaagccctactcatggtcaaaaacctcctggctcctatgtctccccgtaccat
cactctccatataagcacgctcatattcctgctcacgcacaacactatcagagctacatg
cagctgatccaacagaaatcagcagtggagtatgcacagagccaaatgagtctggtgagt
atgtgcaaagactttaattcaagccagagcgaaccgaggatggagtggaaagtcaaggtc
agaagcgatgggacccgctacattacaaagaggccagtcagggacaggctgctgagagaa
cgtgccataaagatcaaggaggagcgcagtggtatgactaccgacgatgatgccataagt
gaaatgaagatgggccgttactggagcaaggaagaacggaagcagcatttagtgaaagcg
aaggagcagaggaggcggcgtgagtttatgatgcagagcaggttggattgcttaaaggaa
cagcaaggtgcagaagaaaagaaagagatgaatatcattgaactgagccacaaaaaaatg
atgaagaagagaaataaaaaaatatttgacaattggatgacaatccaagaactgctaacc
catggaacaaagtcaccagatggtacacgggtgtacaattccttcctgtcagtgactact
gtataa
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integrated database retrieval system
