Buteo buteo (common buzzard): 142043022
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Entry
142043022 CDS
T11399
Symbol
COL4A6
Name
(RefSeq) collagen alpha-6(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
bbut Buteo buteo (common buzzard)
Pathway
bbut04382
Cornified envelope formation
bbut04510
Focal adhesion
bbut04512
ECM-receptor interaction
bbut04518
Integrin signaling
bbut04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bbut00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
142043022 (COL4A6)
04518 Integrin signaling
142043022 (COL4A6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
142043022 (COL4A6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
142043022 (COL4A6)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
142043022 (COL4A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bbut04147
]
142043022 (COL4A6)
00536 Glycosaminoglycan binding proteins [BR:
bbut00536
]
142043022 (COL4A6)
Exosome [BR:
bbut04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
142043022 (COL4A6)
Glycosaminoglycan binding proteins [BR:
bbut00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
142043022 (COL4A6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
142043022
NCBI-ProteinID:
XP_074909772
LinkDB
All DBs
Position
22
Genome browser
AA seq
1703 aa
AA seq
DB search
MGRGCAPAPPAVGRAGVLVLVLLCLGAELASGGGKKSYSGPCGGRDCSAGCKCFPEKGAR
GRPGPIGLQGPIGAPGFTGPEGLPGAKGERGAVGPPGPSGQKGDKGPMGVPGFQGINGIP
GHPGQSGPRGLPGLDGCNGTIGSPGVSGSDGFPGLPGLPGRPGPKGLKGEPVFAQGSLKG
MKGENGLPGLDGISGPKGFPGPIGSAGPIGLPGLQGPMGPPGPPGPKGNMGLGFQGEKGE
KGDVGLPGPPGPPPSTGILEFMGFPKGKQGEKGEPGPQGFPGDKGLPGMPGFGGVGEKGE
KGVPGLPGGRGLLGLDGSDGIPGRKGHPGIPGYPGLDGVEGMKGELGDIGPPGPPIVIDR
EGVVISGAPGDPGNPGIPGPPGDEGISGLPGLPGAPGFPGLERDGMGPGGSPGIPGVKGE
VGEPGRATIGLPGTRGRDGLPGLPGAPGLPGSPRPSFPPDTILDGRPGAPGEPGQRGLPG
ALGPKGYKGEAGDCACDGGVTRAGLKGISGPPGPSGSPGVPGIKGIGGDPGTVGAPGLRG
PPASAGQQGLPGLKGEKGDSSYATGKGARGDRGATAPRGPSGIPGTPGRDGLPGLPGPPG
PPGDGGLGFPGEKGLPGLPGSKGHRGETGSPGVGYPGPSGVRGPPGDPGMDGFPGQAGLP
GPPGITLPCIVPGAYGPPGTPGFPGLPGSKGSKGFPGFPGQPGLHGSKGQPGSPGIIGLQ
GEPGFPGPRGEQGSQGLPGLDGTDGLPGKMGASGLAGAKGTPGDVFGAESGALGERGRPG
LPGDKGLTGDLGFPGPKGLDGRPGLLGIKGEQGNPGYSGVPGLRGPPGPGGPFGIKGKPG
PLGSVGLAGAPGLPGVKGLAGDVGPQGPAGMKGFPGLDGAPGSPGERGFLGPPGPFGQDG
RPGFSGPKGEKGSSGLLGFPGMPGLPGVPGVNGFKGTPGTAGGKGNPGAVGLQGQKGDRG
DVGPPGLPVLGLPEQALEFKGDKGDPGLAGLGGFPGPRGDKGIPGSRGQPGLPGPIGSAS
KERGLHGDPGFPGPPGQPGLPGQKGTHGIIGFPGMPGERGSDGITGTLGFPGHIGLPGPK
GEQGESVGIPGIAGTKGERGDPGFPGERGREGLKGEPGYPGNTGVNGLKGSPGDLGQEGP
AGIPGNAGLRGIPGPSGPPGQPGPVGFPGARGTAGPKGFHGFPGLNGLNGLPGTKGSPGT
PGLSEAGLKGPAGLPGPKGEEGSPGLGRGALGFPGPKGSSGDMGPPGPVGLPGLPGTPGA
SLPSDIRGRPGDAGHPGTDGSSGIPGPPGSRGPPGPASDQGDTGSPGFPGVLGLRGIKGD
VGPTGPIGLPGASGFKGIRGEPGLMGMPGKDGPPGDPGHPGLKGETGHRGLPGRQGAPGI
TPQPEEVTAPAGLPGLPGIDGVPGFDGDPGFQGPAGKPGTKGLPGRSGLKGRDGLPGSPG
IVGDPGPLGAPGPQGFEGVAGKPGSLGLPGMPGRSVGVGYTLVKHSQSDQIPPCPIGMNK
LWDGYSLLYVEGQEKSHNQDLGFAGSCLPRFSTMPFIYCNINEVCYYASRNDKSYWLSTT
APIPMMPVDSVQIPQYISRCSVCEAPSQAVAVHSQDITIPQCPLGWRSLWIGYSFLMHTA
AGAEGGGQSLVSPGSCLEDFRATPFIECNGARGTCHYFANKYSFWLTTVEQSQQFVSAPP
SETLKAGQLRTRVSRCQVCMKNL
NT seq
5112 nt
NT seq
+upstream
nt +downstream
nt
atgggccgcggctgcgcccctgctccgccggccgtggggcgcgcaggggtgctggtgctg
gtgctcctctgcctgggcgcggagctggcgagcgggggtggaaagaagtcttacagtgga
ccgtgtggaggccgtgattgcagtgctggatgcaaatgttttccagagaagggtgcacgg
ggtcgaccaggaccgattgggcttcaaggaccgataggtgcacctggatttactggcccg
gaaggtttgccaggagcaaaaggtgagagaggagcagtgggcccccctggaccatctgga
cagaaaggtgacaagggcccaatgggagttccagggtttcaaggcatcaacgggatccca
ggtcaccctgggcagtctggacctagaggtctgcctggcctcgatggctgcaatggtacc
attggaagtcctggtgtttctggatcagatggatttcctggcctacctgggctgcctggt
cgtcctggcccaaaaggccttaagggagaacctgtttttgctcaaggcagtcttaaagga
atgaagggagaaaatggtcttcctggattggatggaatttctggcccaaaaggttttcca
ggtccgataggttcagcaggccctataggattaccaggtttgcagggtccaatgggtccc
cctgggccaccaggtccaaaaggtaacatgggattaggctttcaaggagaaaaaggagaa
aagggtgatgtagggctgcctggccctccaggtcccccaccatccactggaatactggaa
ttcatgggatttccaaaagggaagcaaggagaaaagggtgagccgggccctcaaggattc
cctggagacaagggtttgcctggcatgccgggctttggaggtgttggagaaaaaggagaa
aaaggtgttcctggcttaccgggtggcaggggtcttttgggactggatggatctgatggg
attccagggagaaagggtcatccaggtattccaggctatccaggactggatggagttgaa
ggcatgaagggtgaactaggtgacatcggtcccccaggccctcctatcgttattgacagg
gaaggtgtagtcatttcaggtgccccgggtgaccctggaaacccaggaatacctggtcct
ccaggagatgaagggatcagtggtttaccaggccttccaggagctccagggtttccaggc
ctggagagagatggaatgggccctggagggtctccaggtattccaggtgtgaagggtgaa
gttggagaaccaggaagagcaacgattggattaccaggcactcgcggcagagatggttta
ccgggtctgccaggagcaccaggattgcctggttcaccacgcccttcattccccccagac
accatcctggatggaaggcctggggccccaggggagcctggacagagagggctgccagga
gctttgggtccaaaggggtacaaaggagaggcaggtgattgtgcttgtgatggaggagtt
acaagagctggtctaaaaggcatctcaggtccaccaggtccatcgggaagccccggtgtg
cctgggattaagggcattggtggagacccaggcactgtgggtgcaccaggactgcgaggc
cctccggcttcagctggtcagcaaggtcttccaggccttaagggagaaaaaggggattcg
tcctatgcaacaggcaaaggtgctcgtggggaccgtggtgcgacagcacccagaggacct
tcaggcatcccaggaacccctggcagggatggacttccaggcttgccaggcccaccaggc
cctccaggtgatggtgggctaggtttcccaggtgaaaaaggactgccaggattacctggc
tccaagggccatcgtggagaaactggttctcctggtgttggatatccaggtcctagtgga
gttcgtgggccgccaggtgacccaggaatggatgggtttccaggacaagcaggtcttcca
ggccctccaggtatcaccttgccctgcatagttcctggagcatatgggcccccagggact
cccggctttccaggattgccaggttctaaaggcagcaaaggctttcctggctttccaggc
caacctggattacatgggtcaaaaggacagccagggtctccaggaataataggcttgcaa
ggggaacctggcttccctgggcctcgaggagagcaagggtcacaaggacttccaggactg
gatggaacagatggtttgcctgggaaaatgggtgcttcaggcttagctggagcaaaagga
actcctggagatgtatttggtgctgagagtggagccctgggagagcgtggccgacctgga
ctcccaggtgataaagggcttacaggtgatcttggatttccaggaccaaaagggttagat
ggaagaccaggcctcctaggtattaaaggtgaacagggtaatccaggatattcgggtgtc
cctggattgcggggacctcctggtcctggaggtccttttggcattaagggaaaaccagga
cccttggggtcagttggccttgcaggagcaccaggacttcctggagtcaaaggcttggct
ggggatgtaggtccacaaggccctgctggtatgaaaggctttccaggtcttgatggtgct
ccaggatctcctggggaaagaggattcttagggccacctgggccttttggtcaagatgga
cgtccgggtttttctgggccaaaaggcgagaaagggtcttctggcctgcttggtttccct
ggcatgccaggcctgcctggtgtccctggggtgaatgggtttaaaggaactcctggcaca
gctggaggaaaagggaaccctggagctgtgggactccaaggtcaaaaaggtgacagaggt
gatgtaggtccacctggtcttcctgttcttgggcttccagaacaggcattggaattcaaa
ggagacaaaggagatcctggattagctggacttggaggattccctggacctagaggtgat
aaaggaatcccaggaagccgtgggcagcctggtctccctggtccaattgggtcagcaagc
aaagagagaggtcttcatggtgacccaggcttccctggtccacctggacagcctgggctg
ccaggacagaagggtacacatggtatcataggatttccaggaatgccaggagagaggggt
tcagatggtatcacaggaacacttggattcccaggacatattggcctccctggtccaaag
ggtgagcagggagaatctgttggcattcctggcattgctggaacaaaaggagagcgaggg
gacccagggttcccaggagagagagggagagaaggactcaagggtgaaccaggctaccca
ggaaacactggggtgaatggactcaaaggcagcccaggagatcttggccaagaaggacca
gcaggaatccctggaaatgctgggctgagaggaatccctgggccatcaggacctccaggg
cagccaggacctgttggattccctggagctcgtggaacagcaggacctaaagggtttcat
ggattcccaggtttaaatggtctgaatggcttgccaggcacaaaagggtctcctggaaca
ccaggtctgagtgaagctggactgaaaggccctgcaggtctcccaggtccgaagggtgaa
gaaggttctccaggcttgggtagaggagctctaggattccctggaccaaaaggctcatca
ggagacatgggtccccctggtcctgtgggactgcctggcttgccaggaacacctggagct
tctcttccttctgatatacgtgggagacctggggatgctggccatccaggaactgatggg
agttcaggtattccaggtcctccaggatcacgagggccccctggcccagcttctgaccaa
ggtgacacaggcagtccaggtttccctggtgttcttggcttgcgaggcattaagggtgat
gtgggacccactggtccaattggactccctggagcctctggattcaaaggtataagaggt
gagcctggccttatggggatgccaggtaaagatgggcctccgggggatcctggtcaccct
gggctgaaaggtgaaacgggccatcgaggtctccctggccgacaaggagctccaggtata
accccacagccagaagaagtcacagcccctgcaggcttacctggtctgccaggaattgat
ggtgtccctggctttgatggagatcctggattccagggcccagctggaaaaccaggtaca
aaaggtctgccaggaagatctggtttgaaaggacgtgatggtttacctggatcacctggc
atagttggggatccaggacctttgggtgccccaggaccacaaggatttgaaggtgttgct
ggaaagccgggctcgcttggtttgccgggaatgcctggtcggagtgtgggtgttggatac
actttagtgaagcacagtcagtcagaccaaatcccaccttgtcccataggaatgaataag
ctctgggatggctacagtttattgtacgtggaggggcaggaaaagtcacacaaccaggat
cttggttttgctggctcatgtttgcctcgcttcagcaccatgccttttatttactgcaac
atcaatgaagtgtgctactacgccagccgaaatgacaagtcctactggctctccaccact
gctcctatccccatgatgccagtggacagtgttcagatcccacagtacatcagtcgttgc
tcagtatgcgaagcaccttcccaggctgtggctgtgcacagccaggacatcaccatccca
cagtgtccccttggttggcgcagcctgtggatcggatactccttccttatgcatactgcg
gctggtgcagaaggtggaggtcagtcccttgtctcacctggttcttgcctggaggatttc
cgtgccactccgttcattgaatgcaacggtgctaggggaacatgccattactttgcaaac
aagtacagcttctggctgacgaccgttgaacagtcgcagcagtttgtcagtgctcctccc
tcagaaactctgaaagcagggcagcttcgaacaagggtcagccgttgccaagtgtgcatg
aagaacttgtag
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integrated database retrieval system
