Buteo buteo (common buzzard): 142044018
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Entry
142044018 CDS
T11399
Name
(RefSeq) uncharacterized protein LOC142044018
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
bbut Buteo buteo (common buzzard)
Pathway
bbut04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bbut00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
142044018
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
bbut00536
]
142044018
Glycosaminoglycan binding proteins [BR:
bbut00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
142044018
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Laminin_G_2
ConA_2nd_BAM2
Motif
Other DBs
NCBI-GeneID:
142044018
NCBI-ProteinID:
XP_074912066
LinkDB
All DBs
Position
23:13469878..13568347
Genome browser
AA seq
1791 aa
AA seq
DB search
MRCGALALALLCALPLYPEGLEPPEPGSGLQADEVNLLDKITSHAQDLSNISFGYDEANC
SILEIGQYATLNIPTREAFGDRFADELSVLMKLRYSLKEDTSLVTILSHRSHVLFQIRIN
PYALVFVTARRRHYEFPVSFLGDGHWHQVALGISLERLELHVDCRLVDRVSWSNYFGMGV
NTEGLIIVGGLIESFEIPFKGALQQLTFMMGDPAAASEHCHSYNSTCMHSFNLNRFSSPR
ELSPAWPEDSRLTNSDLTPGPPWTWEDAQETLHLQPDGSALTSLSATEMPSAEEEEEGSL
SIEDEGFELLNSTYNKITGPGRPGLGRSSPWVAGSSGEAAKKERASNPQEENVTTEKLTG
DAGTRRHLSPGKPSNAITDLDAPATFTKVSPLARQAAAPKGNVPKGPLGTGSAANVPEHP
LVAASPTVPGLGDSAARPEHPISPVAHRQQGHMKPGPPGLPGPPGLPGCPGRRGLVGPKG
DKGYPGAMGRTGPPGDPGPVGIPGVPTIVLWRNSREDWQTFTQSSFYQLLHAGWPRKPGA
PGPPGHPGKTGAPGPCGDPGEPGEKGQRGYMGEPGLQGLPGRPGYPGSDGFPGLDGKPGP
WGLPGEQGLQGFQGDRGLAGEKGEEGFLGDPGPAGEKGEKGVKGVKGENGLPGPAGLHGM
SGLKGVTGFQGPVGPEGECGSVGPPGPAGPTGEPGQPGSVGCQGINGSQGEMGPPGLPGP
RGPKGPQGLQGRRGPPGPRGVQGPAGMEGSAGPKGDTGADGVPGLRGQPGQEGPGGFIGL
PGSKGTQGEWGCRGPDGAKGDLGTKGDKGPRGARGAKGPPGTRGQVGLQGFPGPRGAAGP
RGPDGEEGQIGPAGLNSSEGPKGGRGPDGLKGTPGPRGARGRVGQRGLVGVPGLPGSRGI
PGAEGAEGKPGTQGSPGTMGSPGRRGPPGFAGLQGGRGHTGPPGSIGSLGKPGPDGDPGS
LGPKGLPGKPGSEGPQGPVGTYGYPGPAGDRGRPGRRGDKGEMGAQGPPGFPGKAGPKAL
PGPPGPRGAPGSQGRVGDPGPRGLPGLPGIPGMRGLDGIPGKPGSAGERGAPGAAGAAGP
SGYPGREGPNGPEGPPGMRGEKGDVGDPGEAGISGLDGEQGPPGRPGAEGQLGPKGEQGE
AGTCGAPGIRGDPGEPGDDGPEGLLGRPGEQGKEGDAGDAGDPGEPGLQGQKGDAGPRGL
PGAPGPGAATGEIGEKGHKGEKGQEGLLGQVGVTGAAGPAGARGRFGGTGLRGPPGLDGP
EGAKGDPGPRGMDGPTGAAGLEGLAGDDGVKGDRGKPGPAGAAGARGLVGAPGLWGYAGH
EGARGAAGAKGEPGRQGPLGPPGEAGAMGLSGTEGLAGAKGEPGKPGKPGQTGSPGQAGP
KGRKGHKGEKGDVGHEGEEGVPGEAGRRGKRGKVGHRPPRGPRGPKGYPGDEGLEGPQGP
QGPYGIPGLKGMKGDPGPKGHKGEKGSVGDLGQQGDDGFKGKPGPHGVPGRPGPKGQQGD
AGPPGPRGHPGIPGTPGLSGPKGLKGFPGLPGPRGTPGLPGLVGPPGPSGPALMLSREEL
RHLIYPSNHLNYTAVWGLLDTLSQELQALVEHPNGTKTNPAATCKELLLAHPSLPDGQYY
IDPNQGSPQDALVAFCNFTAGGETCIAPVHNQVPIKAWLSAYTSEDTFEWFSALPGGFLL
EYAGASPVQLRFLRLHSRLATQKISYSCRPAPEQDQPQPEKEIRFLADSREQSYAASLQG
CVLDNESSITDTIFQFTTQELSLLPLRDLAVFHNGDALHQFGFTVGPVCFS
NT seq
5376 nt
NT seq
+upstream
nt +downstream
nt
atgcgctgcggggcgctggcgctggcgctgctctgcgccctgcccctgtacccggagggg
ctggagccccccgagccgggctccgggctgcaggcagatgaagtgaacttgctggacaaa
attacttcccacgcgcaggacctcagcaatatttcctttggctatgatgaagccaactgc
agcatcctggagattgggcagtatgctacgctcaacatccctacaagggaggcgtttggg
gacaggtttgcagatgagctgagtgtgctgatgaagctcaggtactcgctgaaggaggac
accagcctagtgaccatccttagccatcggagccacgtgctcttccagatcaggattaac
ccatacgccttggtctttgtcactgcaaggaggagacactatgagttcccagtttccttt
ctcggcgatgggcactggcatcaagttgctctcggcatctccttggagaggctggagttg
catgtggactgccggctggtggacagagtgagctggtccaattattttgggatgggagtg
aacactgaggggctgatcatcgttggaggcctgatcgagtcctttgagatcccctttaag
ggtgctctacagcaactgaccttcatgatgggagacccagcagcagccagcgagcactgc
cacagctacaactcaacgtgcatgcactccttcaacctcaaccgcttcagttccccacgg
gagctctcaccagcctggccagaggactccagactcaccaattcagatttgacaccgggg
ccaccttggacgtgggaagatgcccaggagaccctccacctccagcctgatgggagcgcc
ctgacttcactctctgctactgagatgccatcggctgaggaggaggaggagggcagcctt
tctattgaggatgaaggctttgagctgttgaactccacctataataaaattactggccct
ggcaggccagggctcggcaggagcagcccgtgggtcgctggtagctccggtgaagcagcc
aagaaggagcgtgcctccaacccccaggaggagaacgtcaccacggagaagctgacgggt
gatgcaggcacccggcggcacctctcgcctggcaaacccagcaatgccatcactgacctg
gacgcgcctgccaccttcaccaaggtctccccattggcacgtcaggcagctgcccccaaa
ggaaatgtgcccaaaggtcccctggggacagggtcagcggcgaatgtcccagagcatcct
ctggtagcagccagccccaccgtcccagggctcggggacagtgctgcccgcccggagcac
cccatctcgccggtggcacacagacagcagggtcacatgaagccgggaccaccggggctg
ccgggaccaccggggctgccgggctgtcctgggagacgtggactggtaggacccaaagga
gacaaagggtaccctggagccatggggcggacaggccccccaggtgacccaggccctgtg
ggcatccctggtgtccccaccatcgttctctggaggaactccagggaggactggcagacg
ttcacgcaatcatctttttaccagcttctacatgcaggctggccgagaaaacccggagcc
cccggccctccagggcatccagggaaaacaggagcacctggaccctgcggagatccgggg
gagccgggtgagaaaggccagcgggggtacatgggtgaacccgggctccagggcttgccg
ggacgtccaggctaccccgggtcggatggtttccctggcctggatggcaaacctgggcca
tgggggctgccgggagagcagggactgcagggcttccagggtgaccgggggctggctggc
gagaagggagaagagggtttcttgggtgaccctggaccagctggggagaaaggagagaag
ggagtgaagggggtgaagggagaaaatggcctgccaggtcctgctgggcttcacgggatg
tcgggtctgaagggtgtgacaggcttccagggtcccgtggggccggagggagaatgtggc
tcagtgggtcccccaggccctgccggccctacgggagagccaggccagccgggatctgtc
ggatgccaaggcatcaacggctcgcagggagaaatgggccctcctggcttgcccgggccc
cggggccccaagggaccgcagggcttgcaggggagacgcggcccccctggccccaggggc
gtgcagggtccagctgggatggagggatctgctggtcccaaaggagacaccggtgcagac
ggtgtccccgggctgaggggacagccaggacaggagggccctggggggtttattggcctg
ccaggttcaaaaggcacccaaggagagtggggctgtcgaggtccagatggagccaaggga
gacctgggaaccaaaggagacaagggtccacgtggagcacgaggagcaaaagggccccca
gggactcggggccaggtcggcttgcagggctttcccggcccccgaggagcagcggggccc
cgaggaccagacggggaagaaggccagatcggcccagcagggctgaacagcagtgaggga
cccaagggaggccgaggacctgatggcctgaagggaaccccaggaccacggggagcccgg
ggccgcgtgggtcagcgtgggctggtcggagtccctgggctgcctggctcacggggcatc
ccaggagcagaaggtgcagaaggaaagcctggtacacagggttccccagggaccatgggc
agcccgggcaggaggggaccaccgggttttgctggcttgcaggggggccgcgggcacaca
ggacctcctggatcgatagggtctctgggaaaacctggacctgacggagacccgggttcc
ctgggcccaaaggggctgcctgggaagcctggctcggaggggccgcaaggacctgttggc
acctatggctacccaggacctgccggtgaccgcgggaggccggggcgcaggggagacaag
ggagaaatgggagcccaaggcccaccgggatttccaggaaaagctggtcccaaggccctg
ccaggtccccctggtccacgaggtgctcccggctcccagggcagagtgggagacccaggt
cctcgagggcttccagggctgcctggcattcccggcatgcgagggctggatggcatcccc
gggaagcctgggtcggcaggagaaagaggggctcctggagcggccggtgctgctggccca
tcggggtacccgggccgggaaggtccaaacggacctgaagggcctccagggatgagagga
gagaagggtgatgtgggtgatcctggggaagctggcatcagcgggctggatggtgagcag
ggaccaccgggacgaccgggagcagagggtcagctggggcctaaaggcgagcagggagag
gcaggaacctgtggagctccgggcatcagaggggatcctggggagccaggggacgatggg
ccagaggggctgctggggaggcccggggagcaaggaaaggagggtgatgctggtgatgct
ggagacccaggcgagccaggattgcagggacagaagggtgacgctggccccaggggcctt
cctggagcgcctggcccgggagctgctacaggagaaattggagaaaaaggccataaagga
gagaagggccaagaaggtttgctgggtcaggttggtgtcactggagctgcgggacctgct
ggagccagaggacggtttggtgggacgggtctccgaggtcctcctgggctcgatggtcct
gagggagcgaagggagatccagggccacgaggcatggacggacccactggtgctgctgga
ttagagggacttgctggagatgacggagtcaagggagatcgtggcaagcccggtccagcg
ggcgcagcgggtgcccgggggctggtgggtgcccctgggctctggggctacgccgggcac
gaaggagccagaggagcggcgggtgccaagggagagccaggccggcagggtcctctcggg
ccaccgggcgaagctggagccatggggctgagcggcaccgagggcctggcaggtgcaaaa
ggggagccaggcaagccaggaaaaccagggcaaacggggtctccaggacaagccggtcct
aaagggcggaagggtcacaaaggagaaaagggcgatgtggggcatgaaggagaagaaggg
gtccccggagaagctggcagacggggcaagcgaggcaaggtgggccaccggcccccgaga
ggtccccggggacccaagggctacccaggtgatgaggggttggaaggaccccagggcccc
caaggaccctacggcatcccagggctgaagggcatgaaaggagaccctggaccaaaagga
cacaagggcgagaagggcagcgtgggtgacctgggccagcaaggggacgatggcttcaag
ggcaagccaggaccccatggtgtccctgggaggccgggacccaagggacagcagggtgac
gctggcccccctggcccgcggggacaccctggcatccccggaacgccgggcttgtcagga
cccaaagggctgaaaggcttcccagggctgccaggacccaggggcacgccgggcctgccg
ggtctcgttggcccccctggccccagcggacccgcgctgatgctgtccagggaggagctg
cggcacctcatttatccctccaaccacctgaattacacagcggtctggggtttgctagac
accctgagccaggagctgcaagccctcgtcgagcatcccaacggcaccaaaaccaaccca
gcagccacctgcaaggagctgctgctggctcaccccagcctgcccgatgggcaatactac
attgaccccaaccagggcagcccccaggacgcactggtggccttctgcaacttcacggcg
gggggtgagacctgcatagcccccgtccacaaccaggtccccatcaaggcttggctgagt
gcctacacctccgaggacacctttgagtggttcagtgccctgcctgggggcttcctgctg
gagtacgcgggggccagcccggtgcagctccgcttcctccgcctgcacagccgcctggcc
acccagaagatctcctactcctgcagaccggcccccgagcaggaccagccccagccagag
aaggaaatccgcttcctggctgactcccgggagcagagctatgcagccagcctgcaaggc
tgcgtgctggacaatgagtcttccatcaccgacaccatcttccagttcaccacacaggag
ctctccctgctgcccctgcgggacctggctgtctttcacaatggtgacgccttgcaccag
tttggtttcacagtcggaccagtttgcttcagctga
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