Buteo buteo (common buzzard): 142044256
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Entry
142044256 CDS
T11399
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM62-like
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
bbut Buteo buteo (common buzzard)
Pathway
bbut04622
RIG-I-like receptor signaling pathway
bbut05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
bbut00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
142044256
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
142044256
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bbut04121
]
142044256
Enzymes [BR:
bbut01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
142044256
Ubiquitin system [BR:
bbut04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
142044256
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-B_box
zf-C3HC4
zf-RING_UBOX
ANCHR-like_BBOX
zf-C3HC4_4
zf-C3HC4_2
zf-RING_5
zf-RING_6
zf-RING_2
zf-C3HC4_3
TRIM_CC
SPRY
CCDC18_1st
U-box
Motif
Other DBs
NCBI-GeneID:
142044256
NCBI-ProteinID:
XP_074912604
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All DBs
Position
24:12811603..12818931
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AA seq
546 aa
AA seq
DB search
MAEPGAVAGLEELLTCPICLGIYRAPVSLVCGHSFCEACVQEARSRRPCPFTCPVCSAWA
DPARELQPNVQLRSIVQKFLEAPARQEEGEREGRREEEGENSGQRDKVIPCDFCLQGPQP
AVKTCLSCEASLCRAHLSKHSTKSLLKDHVLIEPCDAHLLAERRCPQHGKLLESYCRTDS
VCICVLCSVASPHRKHKIDALEEAFGQAQSVFPETLETVKEHEAALNQSIANLLKQEEEV
KAKESLLRDQLESLFKEMCLQLDNKKREVLKALSHNEEQQLSQIQMEVQKHKEEKDAASC
DIQELEALRDQKDLLLFMKSFAAIRARKRKQPTNKDGVELPRPPVILGKLTTDATLRLFR
QFLSDMQSLFEVPPVQEHLTSSVHPGTMFAYNANVVSASSCTSLYFGLLNPSDAFSHVKS
NESFSHVKSNESFSQGCHFWEVDTSNARCWRLGIVNPTLQCYLQMSRGSLHVFLGQTIIT
AKSFPTALKVVRVELDCRRNTLSFYNVSVKDRDATESLRLLETVSIPSNYPAYAIFGVLD
GSLKLL
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggccgagccgggtgctgtggccgggctggaggagttgctgacctgtcccatctgcctg
ggcatttaccgcgcccccgtgtccctggtctgcggtcacagcttctgcgaggcgtgcgtc
caggaggcccgcagccgccggccctgccccttcacctgcccggtgtgctccgcctgggca
gaccccgctagggagctgcagcccaacgtccagctccgcagcatagtgcagaagtttctg
gaggctcccgctcgtcaagaggagggagagcgcgaagggcgacgtgaagaggagggggaa
aactcaggccagagggacaaggtgatcccgtgtgatttctgccttcaggggccccagcca
gccgtgaagacctgcctgagctgcgaggcctcgctgtgccgagcccacctgagcaagcac
agcacaaagagcctcctgaaagaccacgtcctgatagagccctgtgacgctcatcttttg
gctgagaggaggtgcccccagcacggcaaactgctggagagctactgcaggacggactcg
gtctgcatctgcgtgctgtgctctgtcgctagcccccacaggaaacacaagatcgacgct
ttggaggaggcttttggccaggcgcagagtgtttttcctgaaactctggaaacagtgaaa
gaacacgaagctgcactgaatcaaagcattgcaaatctgctgaaacaagaggaggaagta
aaggctaaggagagcctcctgagggatcagctggagagcctcttcaaagagatgtgtctg
cagctagataacaaaaaaagagaggtcctgaaagctctcagtcacaatgaggagcaacag
ctttctcagattcagatggaggtacaaaaacacaaagaggagaaggatgcagccagctgc
gatatacaggagctggaggctctgagagatcagaaagacctacttcttttcatgaagagt
tttgcagcgattcgagccaggaaacgcaagcaacctactaacaaagatggtgtagaactg
ccaaggccacccgttattttgggtaaattaacaacagacgctactctaaggcttttccgg
caattcctctcagacatgcagtccttatttgaagtaccacctgttcaggaacacctgact
tcttcagtgcatccaggaactatgtttgcttataatgccaacgtagtcagtgcatcctca
tgcacttctctctactttgggctattaaatccatctgatgccttctcacacgtaaagagc
aacgagagcttctcacacgtaaagagcaacgagagcttctcacagggctgtcacttctgg
gaggtggacaccagcaatgcacgctgttggaggcttggaatcgttaatcccaccttgcag
tgctacctgcaaatgtctcgtggttccctccatgtgttcctaggtcaaacaataatcaca
gcaaagagctttcctacagccctcaaagtggtcagggtagagctagactgcagaagaaat
acactgtcattttataatgtgtctgtcaaggatagagatgctactgagagcctcaggctt
ttagagacagtaagcatcccttcgaactatcctgcctatgctatcttcggcgtgcttgac
ggctctttgaagctcctgtag
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