Buteo buteo (common buzzard): 142045521
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Entry
142045521 CDS
T11399
Symbol
PDZRN4
Name
(RefSeq) PDZ domain-containing RING finger protein 4 isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
bbut Buteo buteo (common buzzard)
Brite
KEGG Orthology (KO) [BR:
bbut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bbut04121
]
142045521 (PDZRN4)
Enzymes [BR:
bbut01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
142045521 (PDZRN4)
Ubiquitin system [BR:
bbut04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
142045521 (PDZRN4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_5
zf-rbx1
PDZ_Tricorn
Prok-RING_4
IBR_1
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
142045521
NCBI-ProteinID:
XP_074915216
LinkDB
All DBs
Position
28:complement(4742747..5025408)
Genome browser
AA seq
1044 aa
AA seq
DB search
MGFDPSRFAAPVAAELQCKLCGRVLEEPLSAPCGHVFCAGCLLPWAARRRLCPLRCRPLA
VADLRPVLPLRSLVQKLEVKCDYSPRGCGRTVRLRELPAHLAACRYGPPPGRPAEPQPRS
GLPGAGRSGGGGGGSAGRPAGGHRCLRGLRSGGGGGGGGGGGPEPGSEVKREAVRWSRRE
KSLLAQLSALQNEVQLTARRYQAKFGQYVSHISGITRDLAGSQPGKGGEPKPLTIMLHRE
NDTLGFNIIGGRPNQNNQEESAEGIYVSKILENGPADKAEGLQIHDKIIEVNGKDLSKAT
HEEAVEAFRNAKEPIVVQVLRRAPISKAHGSSQDVRLVDASTQTDITFEHIMALAKLRPS
TPPVPDICPFLLSDSCHSLHPVEHEFYEGNEYLSSLPADADRAEDFEYEEVELCRISSQE
KLGLTVCYRTDDEEDTGIYVSEVDPNSIAARDGRIREGDRILQINGQDVQNREEAVALLS
SEECKKIVLLVARPEMQLEEGWLDDERNEFLEELNLEMLEEQHNEAMQYTANEVEQPKKH
EEEDGTTDTATSSSNNHEKDSGVGPTDESLRNDESSEQENAPEEQNSTTLQSKRELGHSQ
DTLGSVELQCNESFVSGEYIESDFIGNPEEECERFRQLLELKCKIRNHGEYDLYYSSSMI
ECNRREQDGVEHELQLLNEELRNIELECQNIMQAHRLQKVRDQYGDIWALHDEGFRNYNT
SIDVQRGKLDDIMEHPEKSDKDSSSAYNTAESCRSTPLTVERSPDNSLQRMISITNRKNL
RSTIAANQSSSGQSNRETTSAKTKPAEQNGAAENAVLASESSKFTDQEKQSSEHIPYLSP
YHSSSYRYGNIPAHAKHYQSYMQLIQQKSAVEYAQSQLSLVSMCKDSQKCAEPKMEWKVK
IRSDGTRYITKRPVRDRILKERALKIKEERSGMTTDDDTMSEMKMGRYWSKEERKQHLVR
AKEQRRRREFMMRSRLECLKESPQSGSEGKKEINIIELSHKKMMKKRNKKILDNWMTIQE
LMTHGAKSPDGTRVHNAFLSVTTV
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgggtttcgacccgtctcgtttcgcggctccggtggcggcggagctgcagtgcaagctg
tgcgggagggtgttggaggaaccgctgtccgcaccgtgcgggcacgtcttttgcgccggt
tgcctgctgccctgggcggctcggcggcggctttgccctctgcggtgccgaccgctggca
gtcgccgacctgcgccccgtcctacccctccgcagcctcgtccagaagctggaggtcaag
tgcgattacagcccgaggggctgcggccgcaccgtccgcctgcgggagctgcccgcccac
ctggcggcgtgccgctacggtccgccgccgggccggcccgccgagccgcagccccggagc
gggctgcccggtgccggccgttcggggggaggcggtggtggttccgcggggaggccggcc
ggagggcatcgctgcctgcgggggctgcggagcggcggcggtggtggtggtggtggtggt
ggtggtccggagccgggtagcgaggtgaagagggaggccgtgcgctggagcaggagggag
aagtcgctgctggctcagctctcggcgctgcagaacgaggtgcagctgacggcgaggcgg
taccaggcgaagttcggccagtacgtgagccacatcagcggcatcacccgggacctggcg
ggcagccagcccggcaagggaggagaacccaaaccattaacgatcatgctacaccgagaa
aatgatactttgggattcaatattataggaggacgacccaatcagaacaatcaggaggaa
tctgctgagggaatttatgtgtcaaagattttggaaaatggacctgcagacaaagcagaa
ggcctgcaaattcatgacaagattattgaggtcaatggaaaggacctctccaaggccact
cacgaagaggcagtggaagcttttcgcaacgccaaggagcctatcgtagttcaggtttta
cgacgagccccaattagcaaagctcatggtagctctcaggatgttcgccttgtggatgcc
agcactcagactgacatcactttcgagcacattatggctctggccaaactaaggccttcc
acaccaccagttcctgatatctgcccttttctactttcagacagctgccattctcttcac
ccagtggagcatgaattttatgaaggtaatgagtatctttccagcctgcctgctgatgca
gatagagcagaggactttgagtatgaggaggtggagctgtgccgcattagcagccaggag
aagctggggctgactgtctgttacaggactgatgatgaggaggacacagggatctatgtc
agcgaggttgatccaaacagcattgctgccagagatggccggatccgtgaaggagaccgc
attttgcaaataaatggccaagatgtccagaatcgggaagaggcagtggcattgctctcc
agcgaagaatgcaagaaaattgtgttgctggtcgcaagaccggagatgcagctggaggaa
gggtggctggatgatgaaaggaatgaattcttagaggagttaaacttggaaatgttggaa
gagcagcataatgaagcgatgcagtacacagcgaatgaggtggagcagccaaagaaacat
gaagaggaggatggcactacagacactgcaacttcgtcatccaacaatcatgagaaggac
agtggggtgggacctacagatgaaagtctgcgtaatgacgagagctcggagcaagaaaac
gcgcctgaggagcagaacagcactaccctgcagagcaaacgggagctgggccacagccaa
gatacgttgggaagcgtcgagctccagtgcaatgaaagctttgtgtctggggaatacatt
gaatcggatttcataggaaacccagaggaggaatgtgaaaggtttcggcagctgttggaa
ctgaagtgcaagattcgaaaccacggggagtatgacctgtattactcgagcagcatgata
gagtgcaacaggagagagcaagatggggtggagcacgagctgcagctactcaatgaggaa
ctgaggaacattgaactcgaatgtcagaatattatgcaagctcatcggctccaaaaggtg
agggatcagtacggagacatttgggctttacatgacgaagggttcaggaattacaacacc
agcatagatgtacaaagaggcaaactggatgacatcatggagcaccctgagaagtctgac
aaggacagctccagcgcctacaacacggccgaaagttgcaggagcactccgctgacagtg
gagcgatcccccgataactctctccagaggatgatcagcataaccaacaggaaaaacctg
aggagcacgattgcggctaatcagtcatcctcaggacaaagcaacagggagacaacctca
gccaaaaccaaacccgctgagcaaaacggtgctgctgagaatgcggtgctggcgtcagaa
agcagcaaattcacagaccaggaaaagcagagcagcgagcacattccctacctgtctccg
tatcacagctcttcttacaggtacgggaatatacctgctcatgcaaagcattatcaaagc
tatatgcagctgatccagcagaagtctgctgtggagtacgcccagagccagctcagcctg
gtgagcatgtgcaaagactcgcagaagtgcgcggagcccaagatggaatggaaagtgaaa
ataaggagtgatgggacaaggtacatcacaaagagaccagttcgagacagaatcctgaag
gaacgtgccttaaaaattaaagaggagcgcagcgggatgacgacggatgacgatacgatg
agcgagatgaagatgggtcgctactggagcaaagaagagcggaagcagcatttggtgcga
gctaaggagcaaaggaggcggcgggagttcatgatgaggagcaggctggagtgtctgaag
gaaagtccgcagagtggcagcgagggcaaaaaggaaattaacattattgaactgagtcac
aaaaagatgatgaaaaagagaaacaagaaaatcttggacaactggatgacaatccaagaa
ctgatgacacacggtgctaaatctccagatggcacaagagtgcacaatgcctttttatca
gttactactgtatga
DBGET
integrated database retrieval system
