Bifidobacterium breve ACS-071-V-Sch8b: HMPREF9228_0006
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Entry
HMPREF9228_0006 CDS
T01844
Symbol
gyrA
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
bbv
Bifidobacterium breve ACS-071-V-Sch8b
Brite
KEGG Orthology (KO) [BR:
bbv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbv03032
]
HMPREF9228_0006 (gyrA)
03400 DNA repair and recombination proteins [BR:
bbv03400
]
HMPREF9228_0006 (gyrA)
Enzymes [BR:
bbv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HMPREF9228_0006 (gyrA)
DNA replication proteins [BR:
bbv03032
]
Prokaryotic type
DNA Topoisomerases
HMPREF9228_0006 (gyrA)
DNA repair and recombination proteins [BR:
bbv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HMPREF9228_0006 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
FUSC
Motif
Other DBs
NCBI-ProteinID:
AEF27122
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All DBs
Position
7339..10029
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AA seq
896 aa
AA seq
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MADETNNTGDEQFTPDGSMEPLSPQEADTTDYGLMESGERIQRKDLQQEMRESYLAYALS
VIVERALPDVRDGMKPVHRRVIYAMYDGGYRPDRGYNKCSRVVGDVMGKYHPHGDSAIYD
TLVRMAQSWSMRNLLVDGQGNFGSPGDDPAAAMRYTECRMAPLAMEMVRDIDKDTVDFVP
NYDGKTQEPTVLPARFPNLLVNGSAGIAVGMATNIPPHNMREVAEGVHWALEHPDASREE
LLENLIRIIKGPDFPTGATILGHKGIEQAYRTGRGLITMRAVVNTEEINGRMCLVVTELP
YQVNPDRLVVSIREAVRDGKIQGIADMRDETSGRTGQRLVLVLKRDAVPKVVLNNLYKHS
QLQQTFGANMLALVDGVPRTLSLDAFIRHWVNHQLDVIARRTAYLKREAEERDHILQGYL
KALDMLDEVIALIRASEDTDTARTGLMELLDIDQVQADAILAMQLRTLTRMNRDKIVAEH
EELQRKIADYIDILAKPERQRKIIGDELDEIVGKYGDERRTKILPFSGEMNVEDLIAEEN
VVVTVTHSGFIKRTKADEYRAQHRGGKGIKGTKLREDDVVDHFFLTSTHNWLLFFTNKGR
VYRIKAYELPEGSRDSKGQHVANLLQFAPDESIQAVLSIPNYEVAKYLVLATRSGKVKKT
PLAEYDSPRQGGLIAVRLMADENGENADELIGAALCNAEDDIILVSKLGMSLKFQANDEQ
LRPMGRQTAGVQGMKFREGDELLAMDVVWGDSDKDLFVVTNEGFAKRTAISEYRLQGRNG
LGIKAVQLVEGRGSLVGALVVSEDDQVMAIMKSGKVIRSNVDEVKRTGRNTQGVTFAKPD
KGDEILSIARNEEKDDPEEEVADNGTAEAGQSPAEPVNESNETAQSGENVNNVDEA
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
gtggcagacgaaacaaacaacaccggtgacgaacagttcaccccggatggctcgatggag
ccgttgagcccgcaggaagcggacaccactgactacggtctgatggaaagcggcgaacgc
atccagcgcaaggatttgcagcaggagatgcgcgaatcctacctagcctacgccctttcc
gtcatcgtggaacgtgctctgccggacgtgcgcgacggcatgaaacccgtgcaccgccgt
gtgatctacgcgatgtacgacggcggctatcgccccgaccgcggctacaacaagtgctcc
cgcgtggtcggcgacgtcatgggtaaataccatccgcacggcgactccgccatctatgac
actttggtgcgcatggcccagtcctggtcgatgcgcaacctgctcgtcgacggtcagggt
aacttcggttcccctggcgacgaccctgccgccgccatgcgttacaccgaatgccgtatg
gccccgctggccatggaaatggtgcgcgacatcgacaaggacaccgtcgacttcgtgccc
aactacgacggcaaaacccaggaaccgactgtattgccggcccgcttcccgaacctgctg
gtcaacggctccgccggcatcgccgtgggtatggccaccaatattccgccgcacaacatg
cgcgaggtggccgaaggcgtgcactgggcgcttgagcatccggacgccagccgcgaagag
ctgctggaaaacctgattcgcatcatcaagggaccggacttccccaccggcgccaccatc
ctcggtcacaagggcatcgaacaggcctaccgcaccggccgtggcctcatcactatgcgt
gccgtggtcaacactgaggagatcaacggccgcatgtgcctggtggtcaccgagctgccg
taccaggtcaacccggatcgtctggtcgtctccattcgtgaggccgtgcgcgacggcaag
attcagggcatcgccgacatgcgcgacgaaacctccggccgtacaggccagcgcctcgta
ttggtgctgaagcgtgacgccgtgccgaaggtggtgctgaacaacctgtacaagcactcc
cagttgcagcagaccttcggtgccaacatgctggccctggtcgacggcgtgccgcgcacg
ctgagcctggacgccttcatccgccattgggtgaaccaccagctcgacgtgatcgcccgc
cgtaccgcatacctgaagcgtgaagccgaggaacgcgaccacatcctgcagggctacctc
aaggctctcgacatgctggacgaggtcatcgccctgatccgagcctccgaagacaccgat
accgcccgtaccggtttgatggagcttctggacatcgatcaggtgcaggccgatgccatc
ctagccatgcagctgcgcacgctgacccgcatgaaccgcgacaagatcgtggccgaacac
gaggaattgcagcgcaagatcgccgactacatcgacattcttgccaagccggaacgccaa
cgcaagatcatcggtgacgaactcgacgagattgtgggcaagtacggtgacgaacgccgt
accaagatcctgccgttctccggtgagatgaacgtcgaagacctgatcgccgaagagaac
gtggtggtcaccgtgacccactccggcttcatcaagcgcaccaaggccgacgaataccgc
gcccagcaccgtggcggcaagggcatcaagggcaccaagctgcgcgaggacgacgtggtg
gatcacttcttcctgacctccacgcacaactggctgctgttcttcacgaacaagggtcgc
gtctaccgcatcaaggcctatgagctgcccgagggttctcgtgattccaagggccagcac
gtggctaacctgctgcaattcgcgcccgacgagtccatccaggccgtgctgtccatcccg
aactacgaggtggccaagtatctggtgctcgccacccgttccggcaaggtcaagaagacc
ccgctggccgagtatgactccccgcgtcagggcggcctcatcgccgtgcgcctgatggcc
gacgagaacggcgagaatgccgatgagctgatcggtgccgcgctgtgcaacgccgaggat
gacatcatcttggtctccaagctcggcatgagcctgaagttccaggccaacgatgagcag
ctgcgcccgatgggtcgtcagactgccggtgtgcagggcatgaagttccgcgagggcgac
gagctactggccatggatgtggtatggggcgactccgacaaggatctgttcgtagtgacc
aacgaaggcttcgccaagcgtacggccatcagcgaataccgcctgcagggccgtaacggc
ctgggcatcaaggccgtgcagctggtcgaaggccgcggctctctggtcggcgcgctcgtg
gtgtccgaagacgatcaggtcatggccatcatgaagtccggcaaggtgattcgttccaac
gtggacgaggtcaagcgcaccgggcgcaacacccagggtgttaccttcgccaagcctgat
aagggcgacgaaatcctttccatcgcacgcaacgaagaaaaggatgaccccgaagaggag
gtcgccgacaacggcactgccgaagcaggccagtcccccgccgaaccggtgaacgagtcc
aacgagaccgcacaatccggtgagaatgtgaacaacgtggacgaggcgtga
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