Bifidobacterium breve ACS-071-V-Sch8b: HMPREF9228_0375
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Entry
HMPREF9228_0375 CDS
T01844
Symbol
gpsI
Name
(GenBank) guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bbv
Bifidobacterium breve ACS-071-V-Sch8b
Pathway
bbv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HMPREF9228_0375 (gpsI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbv03019
]
HMPREF9228_0375 (gpsI)
03016 Transfer RNA biogenesis [BR:
bbv03016
]
HMPREF9228_0375 (gpsI)
Enzymes [BR:
bbv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
HMPREF9228_0375 (gpsI)
Messenger RNA biogenesis [BR:
bbv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HMPREF9228_0375 (gpsI)
Transfer RNA biogenesis [BR:
bbv03016
]
Prokaryotic type
tRNA degradation factors
HMPREF9228_0375 (gpsI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_2
MUG2_C
PCB_OB
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
AEF27698
LinkDB
All DBs
Position
449586..452294
Genome browser
AA seq
902 aa
AA seq
DB search
MEGPEIKAVEAVIDNGTFGKRTLRFETGRLAQQADGAVAAYLDDDSMILSTTTAGSSPKE
NYDFFPLTVDVEEKMYAAGKIPGSFFRREGRPSSEAILACRIIDRPLRPLFPHTLRNEVQ
VVETVLAVNPDDAYDVIALNAASASTMISGLPFEGPVSGVRLALIDGQWVAFPRWSERER
AVFEIVVAGRVVENGDVAIAMIEAGAGKNAWHLIYDEGQTKPDEEVVAAGLEAAKPFIKV
ICEAQDELKKIAAKETKEFQLFPEYTDELYARIDEIAHKDLDEALSIAEKLPRQDRIHEI
KEHVREVLADEFTDMDDAEKDKELGNAFKELQRQIVRRRILTEDYRIDGRGLRDIRTLSA
EVDIVPRVHGSALFQRGETQILGVTTLNMLKMEQQIDALSGPQSKRYMHNYEMPPYSTGE
TGRVGSPKRREIGHGALAEKALVPVLPSREEFPYAIRQVSEAIGSNGSTSMGSVCASTLS
LLAAGVPLKAPVAGIAMGLVSGDVDGKHIFKTLTDILGAEDAFGDMDFKVAGTSEFITAL
QLDTKLDGIPADILAAALQQAKEARATILEVINECIDGPAEMSEFAPRIITTTVPVEKIG
EVIGPKGKMINQIQEDTGAEIAIEDDGTVFISSEGGEAAEKAKSIIDSIANPHVPEAGET
YNGKVVKTTSFGAFVNLTPGTDGLLHISQIRNLANGERIDAVEDVLKEGDTVEVVVQGVD
DRGKISLAIPGFEDQENNAGSRGGRGDRDDRHGSRGRDDRRGGGRGRRSDRDDRDFDDRD
DRPRRRRSDDFEDDYEDRPRRRRSDDRDFDRDDRDSRDDDRPRRRRSADFEDDYEDRPRR
RRSDDRGDRDDRRGSRGGRGRGSDRNPRYATDDNYDDYRADREERSERPRRRVRRDFDPF
ED
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atggagggtcccgaaatcaaggccgttgaggccgtaatcgacaatggaacgtttggcaag
cgcacgctgcgcttcgagaccggccgcctggcacagcaggctgatggtgctgtggccgcc
tacctcgatgacgattccatgattctgtccaccaccaccgccggctccagcccgaaggag
aactacgacttcttcccgctgaccgtcgacgttgaagagaagatgtacgccgccggcaag
atcccgggctcgttcttccgccgtgaaggccgtccgagctccgaggccatcctcgcctgc
cgcatcatcgatcgtccgctgcgcccgctgtttccgcacacgctgcgcaacgaggtgcag
gtcgtcgagaccgtgctcgccgtgaaccctgatgacgcctacgacgtcatcgccctgaac
gccgcctccgcctccaccatgatttccggtctgccgttcgaaggcccggtctccggtgtg
cgtctggccctgatcgacggccagtgggtcgccttcccgcgctggagcgagcgtgagcgc
gccgtgttcgagattgtggtcgccggccgcgttgtcgagaacggtgacgtcgccatcgcc
atgatcgaggccggcgccggcaagaacgcctggcacctcatctacgacgagggccagacc
aagcctgatgaggaagtcgtggccgccggtcttgaggccgccaagccgttcatcaaggtg
atttgcgaggctcaggacgagctcaagaagatcgccgccaaggagaccaaggaattccag
ctcttcccggagtacaccgacgagctgtacgcccgcatcgacgagatcgctcacaaggat
ctggacgaggccctctccatcgccgagaagctgccgcgccaggaccgcatccatgagatc
aaggagcacgtgcgcgaggtgctcgcggacgagttcaccgatatggacgatgccgagaag
gacaaggaactcggtaacgccttcaaggagctgcagcgccagatcgtgcgtcgccgcatc
ctgaccgaggactatcgcatcgacggccgtggcctgcgcgacatccgcaccctgtccgcc
gaggtggacattgtgcctcgcgtgcacggttccgccctgttccagcgtggcgagacccag
attctgggcgtcaccaccctgaacatgctcaagatggagcagcagatcgacgctctgtcc
ggtccgcagtccaagcgctacatgcacaactacgagatgccgccgtactccactggtgag
accggtcgcgtcggctccccgaagcgccgcgaaatcggccatggtgccctcgccgagaag
gctctcgtgccggtgctgccgagccgcgaagagttcccctacgccatccgccaggtctcc
gaggccatcggttccaacggttccacttccatgggttccgtgtgcgcctccacgctgtcc
ctgctcgctgccggcgtgccgctgaaggctccggttgccggcatcgccatgggtctcgtg
tccggcgatgttgatggcaagcacatcttcaagacccttaccgatatcctgggtgccgag
gatgctttcggcgacatggacttcaaggtggccggtacttccgagttcatcactgccctg
cagctcgacaccaagctcgacggcatccccgccgatatcctggccgccgctctgcagcag
gccaaggaagctcgcgccacgattctcgaggtcattaacgagtgcatcgacggcccggct
gagatgagcgagttcgctccgcgcatcatcaccaccaccgttccggtcgagaagatcggc
gaggtcatcggcccgaagggcaagatgatcaaccagattcaggaagacaccggtgctgag
atcgctatcgaggatgacggtaccgtcttcatctcctccgaaggtggcgaggctgccgag
aaggccaagtctatcatcgactccatcgccaacccgcacgtgcctgaggccggcgagacc
tacaacggcaaggtcgtcaagaccacgagcttcggtgctttcgtgaacctcactcctggc
accgacggtctgctgcacatctcccagattcgcaacctggccaacggcgagcgtatcgac
gccgttgaggacgtgcttaaggaaggcgacaccgttgaggtcgtcgtgcagggcgttgac
gatcgcggcaagatttccctggctatccccggtttcgaggatcaggagaacaacgccggt
tcccgtggtggccgtggcgatcgtgatgatcgccacggtagccgtggccgtgacgaccgc
cgtggcggtggccgtggccgccgctccgaccgtgacgatcgcgacttcgacgatcgcgac
gaccgtccgcgtcgccgtcgctccgacgatttcgaggatgactacgaggatcgtccgcgt
cgccgtcgttccgatgatcgcgacttcgaccgtgacgaccgcgattcccgcgatgatgat
cgtccgcgtcgccgtcgctccgccgatttcgaggatgactacgaggatcgtccgcgtcgc
cgtcgttccgatgaccgtggcgatcgtgatgaccgccgtggttctcgtggtggccgtggc
cgtggctccgaccgcaacccgcgctacgccaccgacgacaactacgacgactaccgcgcc
gaccgcgaagagcgctccgagcgcccgcgccgccgcgttcgccgcgacttcgatcccttc
gaggactga
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