Bifidobacterium breve ACS-071-V-Sch8b: HMPREF9228_0396
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Entry
HMPREF9228_0396 CDS
T01844
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
bbv
Bifidobacterium breve ACS-071-V-Sch8b
Pathway
bbv02024
Quorum sensing
bbv03060
Protein export
bbv03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
bbv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
HMPREF9228_0396 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HMPREF9228_0396 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HMPREF9228_0396 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
bbv02044
]
HMPREF9228_0396 (ffh)
Enzymes [BR:
bbv01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
HMPREF9228_0396 (ffh)
Secretion system [BR:
bbv02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
HMPREF9228_0396 (ffh)
Eukaryotic Sec-SRP protein
HMPREF9228_0396 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_22
nSTAND3
MeaB
AAA_31
ArsA_ATPase
cobW
Zeta_toxin
AAA_24
APS_kinase
AAA_18
Motif
Other DBs
NCBI-ProteinID:
AEF27087
LinkDB
All DBs
Position
complement(473817..475493)
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AA seq
558 aa
AA seq
DB search
MAARLLPIMAAFSSLTDRLSNAFKRLKSKGKLSEADIDGTIREIRRALLDADVALDVVRS
FTGKVRERALGTEVSDALNPAQQVVKIVNEELTDVLGQGVDRPLNFAKNPPTIIMLAGLQ
GAGKTTLAGKLGYWLKDSGHTPLLVAADLQRPNAVTQLQVVGERAGVPVYAPEKGVQSDG
GEAVAAPGQTSGDPVKVARDSIEIAKQKLYDTVIIDTAGRLGVDEELMKQARDIRDVVQP
NEILFVIDAMIGQDAVKTAKAFDEGVDFTGVVLSKLDGDARGGAALSVASVTGKPILFAS
TGEGLKDFEVFHPDRMASRILDMGDIMTLIEQAQKQFDEEEARKAAEKISEGSFGLDDFL
DQLQQVRKLGSMKSLLGMIPGMAQHRKELEQFDEKEIDRTEAIIRSMTPAERRDPSIING
SRRARIAYGSGVTVSQVNALLQRFEQAAKMMKRMSNRGGMGGGIPGFGGPAMGGGKKKGK
NKKKGGKSGNPMKREAEEKALRDKLAGKSSGSTGGSAFAKKPQNPALPAGLEQMMGNVDG
GTELPPNLGGGLGGLFGR
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
gtggcggctagactgttgcccattatggcagcatttagttctttgacagataggctctcg
aatgcgttcaagcgtctgaagagcaagggcaagctttccgaagcggatatcgacggcacg
atccgcgaaatccgccgcgcgctgctcgacgccgacgtggcgctcgacgtggtgcgttcc
ttcactggcaaggtgcgcgagcgcgcactgggcaccgaggtgtccgatgcgctcaaccct
gcccagcaggtggtgaagatcgtcaatgaggagctcaccgacgtgctcggtcagggcgtg
gaccgcccgctgaacttcgccaagaacccgccgacgatcatcatgctcgcaggtcttcag
ggtgccggtaaaaccacgctggccggcaagctcggctattggctcaaggattccggccat
acgccgctgctggtggcggccgatttgcagcgtccgaacgccgtgacccagctgcaggtg
gtcggcgagcgcgccggcgtgcccgtctacgcccccgagaagggcgtgcagtccgacggc
ggcgaggctgtggccgctccgggccagacttccggtgacccggtgaaggtggcacgcgat
tccatcgaaatcgccaagcagaagctttatgacacggtgatcatcgataccgccggtcgc
ttgggcgtggacgaggagctgatgaagcaggcacgcgatatccgtgacgtcgtgcagccc
aatgaaatcctgttcgtcatcgacgcgatgatcggtcaggacgcggtcaagaccgccaaa
gcattcgatgaaggcgtggacttcaccggcgtggtgctctccaagctcgatggcgacgcc
cgtggtggtgccgcgctgtccgtggcatccgttaccggcaagccgattctgttcgcttcc
actggcgagggtctgaaggacttcgaggtcttccacccggatcgtatggcatcgcgcatc
ctcgacatgggcgacatcatgacgctcatcgagcaggcgcagaagcagttcgatgaggaa
gaggcccgcaaggccgccgagaaaatctccgaaggctccttcggcttggacgacttcctc
gatcagctgcagcaggtacgcaagctgggctcgatgaagtcgctgctcggcatgattccg
ggcatggcccagcaccgcaaggaactcgagcagttcgatgagaaggaaatcgaccgcacc
gaggcgatcattcgctcgatgaccccggccgagcgccgcgatccgtcgattatcaatggt
tcccgccgcgcccgtatcgcctatggttccggcgtgacggtttctcaggtgaacgctttg
ctgcagcgtttcgagcaggccgcaaagatgatgaagcgcatgtccaatcgtggcggcatg
ggcggcggcatccccggcttcggcggcccggctatgggcggcggcaagaagaagggcaag
aacaagaagaaaggcggcaaatccggcaatccgatgaagcgcgaggccgaggagaaggca
ttgcgcgacaagctggccggcaaatcctccggttcgaccggcggttccgccttcgccaag
aagccgcagaacccggccctgcccgccggccttgaacagatgatgggcaacgtcgatggt
ggcactgaactgccgccgaacctcggcggaggccttggcggactgttcggccgctga
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