Bifidobacterium breve ACS-071-V-Sch8b: HMPREF9228_0503
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Entry
HMPREF9228_0503 CDS
T01844
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bbv
Bifidobacterium breve ACS-071-V-Sch8b
Pathway
bbv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bbv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HMPREF9228_0503 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbv03400
]
HMPREF9228_0503 (ung)
Enzymes [BR:
bbv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HMPREF9228_0503 (ung)
DNA repair and recombination proteins [BR:
bbv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HMPREF9228_0503 (ung)
Prokaryotic type
HMPREF9228_0503 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
PTHB1_CtH
Motif
Other DBs
NCBI-ProteinID:
AEF26697
LinkDB
All DBs
Position
complement(597785..598474)
Genome browser
AA seq
229 aa
AA seq
DB search
MIKPLRELVEPGWANALADVEPTIHRMGDFLREENAAGRPWLPASHNILRAFTIPFDSIK
VLIVGQDPYPTPGHPVGLSFCVAPEVRPLPKSLINIYKELVDDLGVPMPPNGDLTAWTER
GVMLLNRCLTVGVGRPNSHQGKGWEEVTEAAIRALNARVDGNGKPKPLVAILWGRNAQSL
EPLLTNAFIIKSPHPSPLSASRGFFGSKPFSRANQALINMGAEPVDWSL
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaaccattgagagaactggtagagcccggatgggcaaacgcactggccgatgtc
gagccgaccatccaccgcatgggcgattttctccgggaggagaacgccgcaggcagaccc
tggctgccggccagccacaatattctcagggcctttaccattccgtttgattcgatcaag
gtactgatcgtgggccaagacccctaccccactcccgggcatccggtgggactgagcttc
tgcgtggcaccggaggtacgaccactgccgaagagcctgattaatatctataaggaactg
gtcgacgatctaggcgtgccgatgcccccgaacggagacctgacagcatggaccgagcgc
ggggtcatgttgctgaacaggtgcttgaccgtgggagtcggacgccccaactcccatcag
ggcaaaggctgggaagaagtcaccgaagccgctatccgagcattaaacgcacgcgtggac
ggcaacggcaaaccgaagcccttggtggctattctatggggacgcaacgcgcagagtctg
gaaccgctgctcaccaacgcctttattattaagtcacctcatccgagcccgctttccgca
tcccgaggtttcttcggctccaaacctttctctcgagctaatcaggcccttatcaacatg
ggtgccgagcccgtggattggagtctgtaa
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