Bifidobacterium breve ACS-071-V-Sch8b: HMPREF9228_0506
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Entry
HMPREF9228_0506 CDS
T01844
Symbol
groL
Name
(GenBank) chaperonin GroL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
bbv
Bifidobacterium breve ACS-071-V-Sch8b
Pathway
bbv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HMPREF9228_0506 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbv03019
]
HMPREF9228_0506 (groL)
03110 Chaperones and folding catalysts [BR:
bbv03110
]
HMPREF9228_0506 (groL)
03029 Mitochondrial biogenesis [BR:
bbv03029
]
HMPREF9228_0506 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bbv04147
]
HMPREF9228_0506 (groL)
Enzymes [BR:
bbv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
HMPREF9228_0506 (groL)
Messenger RNA biogenesis [BR:
bbv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
HMPREF9228_0506 (groL)
Chaperones and folding catalysts [BR:
bbv03110
]
Heat shock proteins
HSP60 / Chaperonin
HMPREF9228_0506 (groL)
Mitochondrial biogenesis [BR:
bbv03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
HMPREF9228_0506 (groL)
Exosome [BR:
bbv04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HMPREF9228_0506 (groL)
Exosomal proteins of other body fluids (saliva and urine)
HMPREF9228_0506 (groL)
Exosomal proteins of breast cancer cells
HMPREF9228_0506 (groL)
Exosomal proteins of colorectal cancer cells
HMPREF9228_0506 (groL)
Exosomal proteins of bladder cancer cells
HMPREF9228_0506 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AEF26995
LinkDB
All DBs
Position
599948..601573
Genome browser
AA seq
541 aa
AA seq
DB search
MAKIISYDEEARQGMLEGLDKLANTVKVTLGPKGRNVVLDKTYGAPTITNDGVSIAKEID
LEDPYERIGAELVKEVAKKTDDVAGDGTTTATVLAQSLVHEGLKNVVAGSNPIALRRGIE
KATEVIVKELVVAAKDVETKDQIAATATISAADPEVGEKIAEALDKVGQDGVVTVEDNNR
FGLDLDFTEGMRFDKGYIAPYFVTNADDQTAVLEDPYILLTSGKVSSQQDIVHVAELVMK
TGKPLLIIAEDVDGEALPTLILNNIRGTFKSCAVKAPGFGDRRKAMLQDMAILTGAQVVS
DELGLKLESVDTSVLGHAKKVIVSKDETTIVQGAGSKEDIDARVAQIRAEIENTDSDYDR
EKLQERLAKLAGGVAVIKVGAATEVEAKERKHRIEDAVRNAKAAIEEGLLPGGGVALVQA
AAKAEKAEAVTSLTGEEATGAAIVFRAIEAPIKQIAENAGVSGDVVINKVRSLPDGEGFN
AATDTYEDLLAAGVTDPVKVTRSALQNAASIAGLFLTTEAVVANKPEPKAAAPAAGADMG
Y
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagatcatttcttatgatgaggaagcccgtcagggcatgctggagggcctcgac
aagctcgccaacaccgtcaaggtcaccctgggtccgaagggccgcaatgtcgtgctcgac
aagacctacggcgctccgaccatcaccaacgatggcgtgtccattgccaaggaaatcgac
cttgaggatccgtacgagcgcatcggcgccgagctggtcaaggaagtcgccaagaagacc
gacgacgtcgccggcgacggtaccaccaccgcaaccgtgctcgcccagtccctggttcac
gagggtctgaagaacgtggtcgccggttccaacccgatcgcgctgcgtcgcggcattgag
aaggccaccgaggtcatcgtcaaggagctcgtcgttgccgccaaggacgttgagaccaag
gaccagattgctgctaccgccaccatctccgctgctgaccccgaggtcggcgagaagatc
gctgaggctctggacaaggtcggccaggatggcgttgtgaccgttgaagataacaaccgc
ttcggtctggacctcgacttcaccgagggcatgcgtttcgacaagggctacattgccccg
tacttcgtcaccaacgctgacgaccagaccgccgtgctcgaggatccgtacattctgctg
acctccggcaaggtctcctcccagcaggacatcgtgcacgtggccgagctggtcatgaag
accggcaagccgctgctgatcatcgctgaggatgttgacggcgaggctctgccgaccctg
attctgaacaacattcgtggtaccttcaagtcctgcgctgtcaaggctccgggcttcggt
gaccgccgcaaggccatgctgcaggatatggccatcctgaccggtgctcaggtcgtctcc
gatgagctgggcctgaagctcgaatccgtcgacacctccgtgctcggccacgccaagaag
gtcatcgtctccaaggacgagaccaccattgttcagggcgctggctccaaggaagacatc
gacgctcgcgtggctcagatccgcgccgagattgagaacaccgactccgattacgaccgt
gagaagctgcaggagcgtctggccaagctggccggcggcgtggctgtcatcaaggtcggc
gctgccaccgaggtcgaggccaaggagcgcaagcaccgcatcgaagatgccgtgcgtaac
gccaaggccgccattgaggaaggcctgctgcccggcggtggcgtggccctcgttcaggct
gctgctaaggccgagaaggctgaggccgtcacctccctgaccggcgaagaggctaccggt
gccgccatcgtgttccgcgccatcgaagccccgatcaagcagattgccgagaacgctggc
gtgtccggcgacgtggtgatcaacaaggttcgttctctgcccgatggcgaaggcttcaac
gccgccaccgacacctacgaggacctgctggccgccggtgtgactgacccggtcaaggtg
acccgttccgctctgcagaacgccgcctccattgctggtctgttcctgaccaccgaggcc
gtcgtcgccaacaagccggagccgaaggccgctgccccggccgccggtgccgacatgggc
tactga
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