Bifidobacterium breve ACS-071-V-Sch8b: HMPREF9228_0520
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Entry
HMPREF9228_0520 CDS
T01844
Symbol
hisS
Name
(GenBank) histidine--tRNA ligase
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
bbv
Bifidobacterium breve ACS-071-V-Sch8b
Pathway
bbv00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
bbv00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HMPREF9228_0520 (hisS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
bbv01007
]
HMPREF9228_0520 (hisS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bbv03016
]
HMPREF9228_0520 (hisS)
Enzymes [BR:
bbv01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
HMPREF9228_0520 (hisS)
Amino acid related enzymes [BR:
bbv01007
]
Aminoacyl-tRNA synthetase
Class II (A)
HMPREF9228_0520 (hisS)
Transfer RNA biogenesis [BR:
bbv03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
HMPREF9228_0520 (hisS)
Prokaryotic type
HMPREF9228_0520 (hisS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
AEF28027
LinkDB
All DBs
Position
618440..619903
Genome browser
AA seq
487 aa
AA seq
DB search
MSGNASHTDNSACFDATLTYYIDFVAKGASISGFPEWLPSERVVEQRVIDTLRKVFELNG
FIGIETRAVETGASLLKKGETSKEIYLLSRLQEVGHESDTPIEDRLGLHFDLTVPLSRYV
VEHSGALTFPFKRWQIQKVWRGERPQEGRFREFVQADIDVIGAGDLPDHYEVELPLVMVS
ALEELRAYGLPKATVHANNRKLSEGFYRGLGLTDIEGVLREIDKLDKIGADEVARLLSET
CGATEAQARACLELAELTASDGAELAAKFDALCEAHGIAEDSEAYELARQGLDTLAMIVD
EAAAIRPGSVIADLKIARGLDYYTGSVYETFLDGAASLGSICSGGRYDNLASQGNRKYPG
VGLSIGLSRLVSYMLHTAGAHANRVSPAAVLVAVWNEEDRPTANRIAAQLRARGIATDVA
PTAAKLGKQIKYADKLGIPYVWFPASAAEGEESTGDEVKNIVTGEQVAADCTSWEPDTVV
AQQTVEI
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgggaacgcctcgcataccgataattcggcatgctttgacgcaaccctcacctat
tatattgatttcgtggctaaaggtgcatcaatatcaggattcccggagtggctcccctcc
gaacgtgtagtggagcagcgtgttatcgacacgcttcgtaaggtttttgagctcaacggc
ttcatcggcattgagacgagagcggtggaaaccggcgcttctttgctgaaaaaaggcgag
accagcaaggagatctacctgctttcccgtctgcaggaggtcggtcacgaatccgacact
ccgattgaggaccgtctgggtctgcatttcgatctgaccgtgccgctgagccggtatgtg
gtcgagcactcgggtgcgctgaccttcccgttcaagcgttggcagattcagaaggtctgg
cgcggtgagcgtccgcaggagggccgcttccgcgagttcgtgcaggccgacatcgacgtg
atcggtgcgggcgacctgcctgaccactatgaggtggagctgccgctggtcatggtttcc
gccttggaagagctgcgcgcatacggcctgcccaaggccaccgtgcatgccaacaaccgc
aagctgtccgaaggcttctaccgtggactcggtctgacggacatcgaaggtgtgctgcgc
gagatcgacaagctcgacaagatcggcgccgacgaggtggcccgactgctttccgaaacc
tgcggtgcgaccgaggcccaggcgcgcgcctgcctcgaactggccgagcttaccgcctcc
gatggtgccgagctggctgccaagttcgacgcgctgtgcgaggcgcacggcatcgccgag
gattccgaggcctatgagctggcccgtcagggactcgataccctggccatgatcgtcgac
gaggccgccgccatccgccccggctccgtgatcgcggacctgaagatcgcccgtggactc
gactattacaccggctccgtctacgagaccttcctcgacggcgccgcctcgcttggttcc
atctgctccggtggccgctacgacaacctcgcctcccagggcaaccgcaagtatccgggc
gtgggcctgtccatcggcctgagccgactggtcagctacatgctgcacaccgccggcgcg
cacgccaaccgtgtgagccctgccgctgtgctggtcgccgtgtggaacgaagaggaccgt
ccgaccgccaatcgcatcgccgcccagctgcgtgcccgtggcatcgccaccgatgtggca
cccaccgccgccaagctcggcaagcagatcaagtatgcggacaagctcggcatcccgtac
gtgtggttcccggccagtgccgccgagggtgaggaatcgaccggtgacgaggtcaagaac
atcgtcaccggcgagcaggttgccgccgattgcacgtcgtgggaaccggatactgtggtt
gcccagcaaaccgtcgaaatctga
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