Bifidobacterium breve ACS-071-V-Sch8b: HMPREF9228_0645
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Entry
HMPREF9228_0645 CDS
T01844
Name
(GenBank) putative sugar diacid recognition
KO
K02647
carbohydrate diacid regulator
Organism
bbv
Bifidobacterium breve ACS-071-V-Sch8b
Brite
KEGG Orthology (KO) [BR:
bbv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bbv03000
]
HMPREF9228_0645
Transcription factors [BR:
bbv03000
]
Prokaryotic type
Helix-turn-helix
Other families
HMPREF9228_0645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Diacid_rec
HTH_30
GGDEF_2
DUF2089
LPD7
DUF5904
Motif
Other DBs
NCBI-ProteinID:
AEF28019
LinkDB
All DBs
Position
complement(763567..764727)
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AA seq
386 aa
AA seq
DB search
MDIDPRIAQTIVENIKGIIRYDINFFDAHGKMIASTDATRIGTFHDAARLAAERKRTVAV
DGDNQFIGARNGINAPVMFGDSVVAVIGITGQRHEVEPFGIMITKMTEILIRENVEQITR
FDQRMMMTNLINLLVSQHNDEDLVSYLSSTLDVDLSIPRCIVLGRCTNADADHTKRNALL
NALDKRFPSGSESIFRTSARGFCILFAITDQVGSMGQLDEHHMGVLSDLQKEISHVLGRP
ISIGIGSMETSANQYWRSYRQATAAVEWLRFTHGARVEEYSNIGLGMLLPAMQQSISEQF
VQNIFAGLDDQRIDAFQTAFNAYTRYNGSVSRAADSLFIHKNTLQNHLNAIAEQTGYNPR
KLDDHTVLELAFLIRNYRSFTGEDPS
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggacatagacccgcgcatagcgcagaccattgttgagaacatcaagggcattatccgc
tacgatatcaatttctttgatgcgcacggcaaaatgatcgccagcaccgacgcaacgcgc
atcggcaccttccacgatgccgcgcgtcttgcggcggagcggaaacggaccgtggcagtg
gatggcgataatcagttcataggcgcccgcaacggcatcaacgcaccggtcatgttcggc
gattcggttgtcgcggtcatcggcatcaccggccagcggcacgaagtcgagccattcggc
atcatgatcaccaaaatgacggaaatactgattcgggaaaacgtcgagcagatcacacgt
ttcgaccaacgcatgatgatgacgaatctcatcaatttactggtatcgcagcacaacgat
gaggatctcgtctcctatctgtcttccacgctcgatgtcgacctgtcaataccgcgatgc
atcgtgctcggacgttgcaccaatgccgacgccgaccacaccaagcgtaacgctctgctc
aatgcgttggataagcgttttccttcaggcagcgagtcgatattcagaacttcggcgcgt
ggattctgcatattattcgccatcaccgatcaagtcggctcaatgggtcaacttgatgaa
caccatatgggagtactgtccgatctgcaaaaagagataagccatgtcttgggacgcccg
atcagcattggcataggaagcatggaaacgtcggcgaatcaatattggcgcagctaccga
caggcaaccgcggctgtggaatggctccgtttcacccatggtgcacgagtggaggaatac
agcaatatcgggctcggcatgctgctgccggcgatgcagcaatccataagcgaacagttc
gtgcagaacatcttcgcgggtctggatgatcaacgaatcgacgccttccagacggcgttc
aacgcgtacacccgatacaacggaagcgtgagccgggccgccgatagcctgttcatccac
aagaacacattgcagaaccatctcaacgccatcgccgagcaaaccggctacaatccgcgc
aagctcgatgaccacaccgtactggaactggcgttccttatccgaaactaccgctcgttc
accggcgaagaccctagctga
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