Bifidobacterium breve ACS-071-V-Sch8b: HMPREF9228_0685
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Entry
HMPREF9228_0685 CDS
T01844
Symbol
miaB
Name
(GenBank) tRNA-i(6)A37 thiotransferase enzyme MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
bbv
Bifidobacterium breve ACS-071-V-Sch8b
Brite
KEGG Orthology (KO) [BR:
bbv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bbv03016
]
HMPREF9228_0685 (miaB)
Enzymes [BR:
bbv01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
HMPREF9228_0685 (miaB)
Transfer RNA biogenesis [BR:
bbv03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
HMPREF9228_0685 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
B12-binding
RNase_J_b_CASP
Motif
Other DBs
NCBI-ProteinID:
AEF27570
LinkDB
All DBs
Position
813633..815084
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AA seq
483 aa
AA seq
DB search
MNEDMMTEAERASIESDEHLTTQERGKGVFHIHTLGCQMNVHDSERIAGVLETDGYVPAT
EEQVNDHDLDLIVLNTCAVRENAAERMYGTVGLWAEMKRQRPNLQIAVGGCMAQLDRQKI
ANKAPWVAAVFGTKNIGDLPQLLNQNRATDTPQVKVDDQLQQFPSQLPAARASRVSSWVA
ISVGCNNTCTFCIVPTTRGKEKDRRPGDILDEVRQCVANGAKEVTLLGQNVNSFGYGIGD
RYAFSKLLRACGTIDGLERVRFTSPHPAAFTDDVIEAMAETPNVMHQLHMPLQSGSDKIL
RAMRRSYRASKFMTILEKVRQAMPDAQISTDIIVGFPGETEEDFQQTLDVVRQARFSSAF
TFIYSPRPGTPAAEMEQVPHDVVQDRFDRLVALQEQITAENLQSFEGRDVEVMITGTQGK
KDADTHRVTGREKTGVLVHIGVPEGQPMPQIGDFVTATVTHAGRHNLIADPDLAQGQTYS
VRH
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagacatgatgaccgaggcggagcgcgcctcgattgaatccgatgagcacctt
acaacacaggaacgcggcaagggcgtgttccacatccataccctcggttgtcagatgaat
gtgcatgattccgagcgcattgccggcgtgctcgagacagatggttatgtgccggccacc
gaggaacaggtcaatgaccatgacctcgatctcattgtgctcaacacctgtgcggtgcgt
gagaacgctgccgaacgcatgtatggcacggtgggcctgtgggcggagatgaagcgtcag
cgcccgaacctgcagattgccgttggcgggtgcatggctcagcttgaccgccagaaaatc
gccaataaggcgccatgggtcgctgcggtattcggcaccaagaacatcggcgacctgccg
caactgctcaaccagaaccgtgccaccgatactccgcaggtcaaggtcgatgaccagctt
cagcagttcccaagccaactgcctgcggccagggcttcccgcgtgagttcgtgggtggcg
atttccgtgggctgcaacaacacctgcacgttctgcatcgtcccgaccacgcgaggcaag
gaaaaggatcgccgtccgggagacattcttgacgaagtgcgccagtgcgtggccaacggc
gccaaggaagtcaccctgctcgggcagaacgtgaattccttcggatatggcatcggtgac
cgctacgccttcagcaaactgttgcgtgcttgcggcacgattgatgggctcgagcgtgta
cgcttcacctcgccgcatccggccgctttcaccgatgacgttattgaagccatggctgag
accccgaacgtgatgcatcagctgcatatgccgctgcagtcaggctccgacaagattctg
cgggccatgcgccgttcctaccgcgcatccaagttcatgacgattctggagaaggtgcgt
caggccatgccggatgcgcagatttccactgacatcatcgtcggcttccccggagagacc
gaagaggatttccagcagaccttggatgtcgtgcgtcaagcgcggttctcttccgcattc
actttcatctactcgccgcgccccggcacgccggctgccgaaatggaacaggtaccgcac
gatgtggtccaggatcgtttcgaccgactggtggcgttgcaggaacagatcaccgcggag
aatctgcagtccttcgaaggccgtgacgttgaagtgatgatcaccggtactcagggcaag
aaggatgccgacacccatcgagtcaccggccgcgagaagaccggcgtgctggtgcatatc
ggcgtgcccgagggccagcccatgccgcagattggcgacttcgtgacggccaccgtcacc
catgccggtcgccacaatctcatcgccgaccctgaccttgctcaagggcagacctactcg
gtgcgacactga
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