Bifidobacterium breve ACS-071-V-Sch8b: HMPREF9228_0713
Help
Entry
HMPREF9228_0713 CDS
T01844
Name
(GenBank) DNA gyrase/topoisomerase IV, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
bbv
Bifidobacterium breve ACS-071-V-Sch8b
Brite
KEGG Orthology (KO) [BR:
bbv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbv03032
]
HMPREF9228_0713
03400 DNA repair and recombination proteins [BR:
bbv03400
]
HMPREF9228_0713
Enzymes [BR:
bbv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HMPREF9228_0713
DNA replication proteins [BR:
bbv03032
]
Prokaryotic type
DNA Topoisomerases
HMPREF9228_0713
DNA repair and recombination proteins [BR:
bbv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HMPREF9228_0713
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Inp1
Motif
Other DBs
NCBI-ProteinID:
AEF26968
LinkDB
All DBs
Position
complement(850444..853164)
Genome browser
AA seq
906 aa
AA seq
DB search
MASHRKPSAQTYDPRTVKEHIVETPLNEEMSKSFLEYAYSVIYARALPDARDGLKPVQRR
IVYQMGEMNLTPDRPYMKSARVVGEVMGKLHPHGDSAIYEAMVRLAQPFAMRLPLVDGHG
NFGSLDDGPAASRYTEARLGPAALGMNADIDEDTVDFTPNYDNKLKEPTVLPAAIPNLLV
NGGSGIAVGMATNLATHNLGEVVNAAKFLMAHPDATLEQLMRYVPGPDWPTGGTIIGRDG
IREAYATGRGTLTTRAATHIEHVTARKQAIVVTELPYMVGPEKVIERISDGVKNRKLEGI
SGAFDLTDRHNGTRIVIEIKTGFDPHAVLVQLFKHTPLQDNFAMNNVALVDGRPHTMGLK
EMLQVWVDHRRVVIRRRSEYRKKKALERLHLVEGLLLAMLDIDEVIQVIRTSDDADAAKT
RLMAVFDLDEVQAQYILDLRLRRLTKMNRIELEAERDDLKKRIEELTRILASAEALDHVV
TSEMDEAVDKWGSPRRTVLLDADPDGTLTPVVAQGSGTSGISKSALEAVKSATTISSAEA
DVAAAAAAAKKTGEQSALTGALKIEDEPCVVMMSATGLIARTTPSAMDVFNSRSASDERL
HDDQITTIFRTSTRATYGLVTSAGRLVLAHVVDLPALPASATLSLQGGVQADDLISMTES
TDPVRGERVVTAIAMEQSADNGENGGDGETTAEAKPLPSLAIGTRNGVVKRWNREAPTTM
DSWPVIDVKDGDEVVFAAVAEDDDRLVFVSSDSSLLTFDAKNVRPQGRTAGGMAGIKLAE
GAHVMAFNVVPAGKVAWTYEEGENGLTSGAGAVVLTVAGDEDALPGTENGAAKVTPLEMY
PTKGRATGGVRSQRFLKGQNTLILAWVGPYPLHASTSAGSPVELPKPDMRRDGSGVDLAS
PIAFIA
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atggcatcacaccgcaaaccgtccgcgcaaacctatgatccgcgtacggtcaaggagcat
atcgtcgagacgccgctgaacgaggagatgagcaagtccttcctcgaatatgcgtattcg
gtgatctacgcgcgagccctgcccgatgcgcgcgacggcctgaaaccggtgcagcgccgc
atcgtctaccagatgggcgagatgaacctgacccccgaccgcccgtacatgaagtccgcc
cgcgtggtgggcgaggtgatgggcaagctccacccgcacggtgattccgcaatctacgag
gccatggtgcgtttggcccagccattcgcgatgcgtttgccgctggtggacggccacggt
aacttcggttccttggacgacggcccggcagcctcccgttataccgaggctcgactcggc
ccggcagctctcggcatgaacgcggatatcgacgaagacaccgttgacttcacgccgaac
tacgacaacaagctcaaagagccgaccgtattgccggccgcaattccgaacctgctggtc
aacggcggttcgggcatcgccgtaggcatggccaccaatctggccacgcataatctcggc
gaagtggtgaatgctgcaaagttcctcatggctcacccggatgccacgcttgaacagctg
atgcgctatgttccgggccccgactggcccaccggaggtacgatcatcggccgcgacggc
attcgcgaggcctacgccaccggccgaggcacgctcaccacgcgcgccgccacccatatc
gagcatgtcacggcccgcaagcaggccatcgtggtcaccgagctgccgtacatggtaggt
ccggaaaaggtgatcgagcgtatttccgacggtgtgaagaaccgcaagctggagggtatc
tccggcgcgttcgacctgaccgatcgtcataacggcacacgtatcgtcatcgagatcaag
accggtttcgatccgcatgcggtgctcgtccagctgttcaagcacacgccgttgcaggac
aacttcgccatgaataacgtggcgttggtggacggccgtccgcacacgatgggcttgaaa
gagatgctgcaggtatgggttgatcaccgtcgcgtggtgattcgccgccgtagcgaatac
cgcaagaagaaagccctggaacgcctgcacctggtcgagggactactcctggccatgctg
gacatcgacgaggtgatccaggtgatccgcacttcggatgatgcggatgccgcgaagacc
cgtttgatggccgtattcgatctagacgaggtccaggcccagtacattctggatctgcgt
ctgcgccgactgaccaagatgaaccgcatcgaacttgaggccgagcgtgacgatttgaag
aagcgcatcgaggagctcacccgcattctggcctccgccgaagcgctcgaccatgtggtc
accagcgaaatggatgaggccgtcgacaagtggggatcgccgcgtcgcaccgtgctgttg
gacgccgatcccgacggcacgttgacgccggtcgtggcacagggttccggcacttccgga
atttcgaaatccgcgctggaggctgtgaagtccgccaccaccatttcctccgccgaggcc
gatgtggctgccgccgctgcggccgccaagaagaccggcgaacagtccgctttgaccgga
gccctgaagatcgaggacgagccgtgcgtggtgatgatgagcgctacgggcctgatcgcc
cgtaccacgccgagcgccatggatgtgttcaactcacgttccgcgtccgacgaacgtctg
cacgatgatcaaatcaccacgattttccggacttccacccgcgccacctatggtctggtc
acctcggccggacgcctggtgctggcacatgtggtcgatctgccggccttgccggcgtcc
gccacgctttctctgcagggcggagtccaggccgacgacctgatcagcatgaccgaatcc
accgaccccgtacgcggggaacgagtggtgaccgcaatcgccatggagcagtcggccgat
aacggcgaaaacggcggcgacggcgaaaccacggcggaggccaagccgctgccgtcgctg
gccatcggcacccgcaacggtgtggtcaagcgttggaaccgagaagctcctaccaccatg
gattcctggccggtcatcgacgtgaaggacggggacgaagtggtgttcgccgccgtggct
gaggatgacgaccgtctggtgttcgtttcctctgattcctcgctactcaccttcgatgcg
aagaacgtgcgcccgcagggccgcacggccggcggcatggccggcatcaagctcgccgag
ggtgctcatgtgatggccttcaatgtggtgcccgccggcaaggtggcttggacctacgag
gaaggcgagaacggtctgacttcgggtgcgggcgcggtggtgctcaccgtggccggggat
gaggatgctctgcccggtaccgaaaacggcgccgccaaggtgactccgctggagatgtat
cccaccaagggtcgtgccaccggtggcgtgcgttcccagcgcttcctcaagggccagaac
acgctgattctcgcctgggtgggcccctatccgttgcacgcctccacatccgccggctcc
ccggtcgagcttcccaaacccgacatgcgccgcgacggttccggcgtggacctcgcatcc
cccatcgcgtttattgcatag
DBGET
integrated database retrieval system
